Click here to switch to the map view.

The map label for this gene is shc2

Identifier: 111221918

GI number:

Start: 2712298

End: 2714541

Strand: Reverse

Name: shc2

Synonym: FRAAL2491

Alternate gene names: NA

Gene position: NA

Preceding gene: 111221919

Following gene: 111221917

Centisome position: NA

GC content: NA

Gene sequence:

>2244_bases
GTGCCTGACCTCGAGCTTCGCGATGTCGACCGCGCGGATGGCAGGCACCACGCCCCGAACCTCGGGCGCACGGACACCCT
GTCGCCCAGCGCGCCCACCGGTGAGCCCGCACCGGCCTCCACCCCCGCAGCGGTGGCGACCCCGACCCCGACCCCGACTA
CGGCACCGGCACCGGCACCGGCACCGGAGAATGCACTGCGGGAGACGGTCCAGCGGGCCGCCGAGCACCTGCTGCGACTG
CAGGACCCGCGCGGCTGGTGGAAGTTCGACCTCGAGACCAATCCGACGATGGACGCCGAGGACCTCCTCCTGCGGGAGTA
CCTCGGCATCCGCACCGTCGAGCAGACCGAGGCCACCGCGAAGCACATCCGTTCCCGGCGCCTCGACGACGGCTCCTGGC
CGACCTATTTCGGCGGCCCCGGGGAACTGTCCACCACGGTCGAGTGCTACATCGCCCTACGGCTCGCCGGTGACTCACCC
GACGACGAACCGCTGCGACGCAGCGCCGCGTGGATTCGCGAGCGCGGCGGCATCCCGGCGACCAGGGTGTTCACCCGGAT
CTGGCTGGCGCTGTTCGGCTGGTGGCGCTGGGAGGACCTGCCGGTCCTGCCGCCCGAGATCATGTTCCTTCCCCCGCGGG
CGCCGCTGAGCATCTACTCGTTCGCCTCCTGGGCCCGCCAGACCATCGTCCCCCTGACGATCGTCTCGGCCGCCCGCCCC
CAGTGCCCGGCGCCGTTCGACCTGGCCGAGTTGGACCCCGACGAGGTCCCCGCCGCCCAGTCCCACGGCGCCGCCCAGTC
CCCCGACACTCGGTCCCCCGCCGGCGGACGGACGCTGCGGGGCGCGATGCGGCGGCTGGGGGGCGACCGGCCGAACACGG
CCAAGGTCTTCTTCCGGGGGCTCGACGCGGCGCTGCACCGCTACCACCGCCACCCGATCGGGCCCCTGCGCCGCCACGCG
CTGCGCACCGCGGAACGCTGGATCATCGCCCGGCAGGAGGCGGACGGCTGCTTCGGCGGGATCCAGCCGCCCGCCGTCTA
CTCGATCATCGCGCTGCGCCTGCTCGGCTACGACCTCGACCATCCGGTCCTCGCCGCCGCGCTGCGCTCGCTGGACGCGT
ACACCCTGCACCGCGAGGACGGCTCGCGCATGATCGAGGCCTCCCAGTCGCCGATCTGGGACACGGCGCTGGCCGTCCTC
GCCCTGGCCGACGCGGGGATCGACGCCCCTGCCGACGTCGACGTGGCGCCCGCGCTGCCCACCCAGCGGGTCGCGACCGG
CGCCCCGGCGCCATCCGCGCCGGTTCCGACGGCGCTGGAACGGGCTGCCGACTGGCTGCTCGGCCAGGAGATCCAGCACC
GCAGGGGTGACTGGGCCATCACCCACCCGGGCGTGGCGCCGGGCGGCTGGGCCTTCGAGTTCGACAACGACACCTACCCC
GACACCGACGACACCGCCGAGGTCGTGCTGGCGCTGCACCGGCTGAACCGGCTTCGCCGGCTGCGCCACCCCACGAACAC
CCGGATCGACGCCGCCCTCGAACGGTCGACGGCCTGGCTGTTCGCCCTGCAGTCCCGCGACGGCGGATGGGGGGCCTACG
ACTCCGACAACGCCAGCACCCTCGTCTACCAGATTCCGTTCGCGGACTTCGGCGCGCTCACCGACCCGTCGTCCGCCGAC
GTCACCGCGCACGTCGTCGAACTGCTCTGCGAGACGGGGCGGATCCGCGACCCGCGTACCCTGCGCGGCGTCGACTGGCT
GCTGCGCAACCAGGAGGCCGACGGATCCTGGTACGGCCGCTGGGGCGTCAACTACGTCTACGGCACCGGCTCGGTGCTGC
CCGCCCTGCAGGCGGCGGGGCTCCCGCCGACCCACCCGGCGATGGTGGCGGGCGCGCGGTGGCTGCTGTCGCGGCAGAAC
TCCGACGGCGGCTGGGGTGAGGACATCCGCTCCTACGGCGACCCGGCGTGGTCCGGCCGCGGACTCTCCACCCCCTCGCA
GACGGCCTGGGCGATGCTCGGCCTGCTCGCCACCGATCACGGCGGCGTCCACGCCGACGCCCTGGCCGCCGCGGCTCGCT
GGCTCACCGAGCAGCAGCGGCCGGACGGCGGCTGGGACGAGGAGATGTTCACCGGCACCGGCTTCCCGGGCTTCTTCTAC
CTCAACTACCACGGCTATCGGCTGGTCTGGCCCGTCATGGCCCTCGGCCGCTACCTGCACAGCCGCCAGCATCCGTCCGA
CTGA

Upstream 100 bases:

>100_bases
CGCGCCTGGTGCGCCTCGGCCAGCACCGATCCCGCGGATCTCGTCGCCACCGCCCTGATCTGCCTGGACAGCCTCGTCAT
CGAAAGGAACCCCGCACACC

Downstream 100 bases:

>100_bases
CTCGCCGGACCGCCGGGCGACCATCTCCACCCACAGCACCAAGTCATCACTGAATGCATACATCTGCTTACCGGTCGGGC
GCCCGGGTAGGACGAAGCCC

Product: squalene-hopene cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>747_residues
MPDLELRDVDRADGRHHAPNLGRTDTLSPSAPTGEPAPASTPAAVATPTPTPTTAPAPAPAPENALRETVQRAAEHLLRL
QDPRGWWKFDLETNPTMDAEDLLLREYLGIRTVEQTEATAKHIRSRRLDDGSWPTYFGGPGELSTTVECYIALRLAGDSP
DDEPLRRSAAWIRERGGIPATRVFTRIWLALFGWWRWEDLPVLPPEIMFLPPRAPLSIYSFASWARQTIVPLTIVSAARP
QCPAPFDLAELDPDEVPAAQSHGAAQSPDTRSPAGGRTLRGAMRRLGGDRPNTAKVFFRGLDAALHRYHRHPIGPLRRHA
LRTAERWIIARQEADGCFGGIQPPAVYSIIALRLLGYDLDHPVLAAALRSLDAYTLHREDGSRMIEASQSPIWDTALAVL
ALADAGIDAPADVDVAPALPTQRVATGAPAPSAPVPTALERAADWLLGQEIQHRRGDWAITHPGVAPGGWAFEFDNDTYP
DTDDTAEVVLALHRLNRLRRLRHPTNTRIDAALERSTAWLFALQSRDGGWGAYDSDNASTLVYQIPFADFGALTDPSSAD
VTAHVVELLCETGRIRDPRTLRGVDWLLRNQEADGSWYGRWGVNYVYGTGSVLPALQAAGLPPTHPAMVAGARWLLSRQN
SDGGWGEDIRSYGDPAWSGRGLSTPSQTAWAMLGLLATDHGGVHADALAAAARWLTEQQRPDGGWDEEMFTGTGFPGFFY
LNYHGYRLVWPVMALGRYLHSRQHPSD

Sequences:
NA

Specific function: NA

COG id: COG1657

COG function: function code I; Squalene cyclase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA