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The map label for this gene is 110835401

Identifier: 110835401

GI number: 110835401

Start: 2879861

End: 2880328

Strand: Reverse

Name: 110835401

Synonym: ABO_2540

Alternate gene names: NA

Gene position: 2880328-2879861 (Counterclockwise)

Preceding gene: 110835402

Following gene: 110835400

Centisome position: 92.31

GC content: 56.62

Gene sequence:

>468_bases
GTGAAAAAGATGCTAACCGCCAGCCTGGTACTGGTCGCTACCCTGTTTGCCGCCGGTAGCGTGGCTGCCAAGAGCACCAA
GGAAATTTCTCCCTACCCACTAGGTGAGCGCTCTGTTTTTAGTGATCGCGCCATTGAAGAGCGCATCAAGCCGGTGGGCT
CTGTGTGTGTAGAAGGAGACGAGTGTGGCAGCGCTGCAGCTCCGGCAGAAGAAGTGGCCAGCGGCCCTCGTTCCGGTGAG
CAAGTCTACAACGGTTCCTGTGCCGCCTGTCACGGTACCGGTGCTGCTGGCGCCCCAAAAATGGGTGACGCCGCTTCCTG
GGCACCGCGCATTGCCAAAGGTGAAGCCACCATGCTCAAGAATGCTATCAATGGTATTAACGCCATGCCTCCTAAAGGGA
TGTGCATGGACTGCTCTGACGATGAAATCAACGCTGCCATCGAGTACATGGTTAGCAAGAGTCAGTAG

Upstream 100 bases:

>100_bases
TTGTCCCTACGCCTTGAGCGGGTATAATCGCCAGCCGCAGCGCCCATAAGGGGCCGTTTAGGGCCTCCGCGGCGAATCAC
AGAGAATTAGAGGTGTAATC

Downstream 100 bases:

>100_bases
CGGCTTTGCAGAAACTCTACTGGTACTCAATCGCAATGGTGTTGCCAGTGTTGTGGCTGGCCGGCTGTTCCGATGATAGC
GCCCCGGCTAATGGGCCTGC

Product: cytochrome c5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKKMLTASLVLVATLFAAGSVAAKSTKEISPYPLGERSVFSDRAIEERIKPVGSVCVEGDECGSAAAPAEEVASGPRSGE
QVYNGSCAACHGTGAAGAPKMGDAASWAPRIAKGEATMLKNAINGINAMPPKGMCMDCSDDEINAAIEYMVSKSQ

Sequences:

>Translated_155_residues
MKKMLTASLVLVATLFAAGSVAAKSTKEISPYPLGERSVFSDRAIEERIKPVGSVCVEGDECGSAAAPAEEVASGPRSGE
QVYNGSCAACHGTGAAGAPKMGDAASWAPRIAKGEATMLKNAINGINAMPPKGMCMDCSDDEINAAIEYMVSKSQ
>Mature_155_residues
MKKMLTASLVLVATLFAAGSVAAKSTKEISPYPLGERSVFSDRAIEERIKPVGSVCVEGDECGSAAAPAEEVASGPRSGE
QVYNGSCAACHGTGAAGAPKMGDAASWAPRIAKGEATMLKNAINGINAMPPKGMCMDCSDDEINAAIEYMVSKSQ

Specific function: It is unreactive with cytochrome c reductase or oxidase [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15888; Mature: 15888

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMLTASLVLVATLFAAGSVAAKSTKEISPYPLGERSVFSDRAIEERIKPVGSVCVEGD
CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
ECGSAAAPAEEVASGPRSGEQVYNGSCAACHGTGAAGAPKMGDAASWAPRIAKGEATMLK
CCCCCCCCHHHHHCCCCCCCHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHCCHHHHHH
NAINGINAMPPKGMCMDCSDDEINAAIEYMVSKSQ
HHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKMLTASLVLVATLFAAGSVAAKSTKEISPYPLGERSVFSDRAIEERIKPVGSVCVEGD
CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
ECGSAAAPAEEVASGPRSGEQVYNGSCAACHGTGAAGAPKMGDAASWAPRIAKGEATMLK
CCCCCCCCHHHHHCCCCCCCHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHCCHHHHHH
NAINGINAMPPKGMCMDCSDDEINAAIEYMVSKSQ
HHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2993632 [H]