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The map label for this gene is 110835400

Identifier: 110835400

GI number: 110835400

Start: 2879496

End: 2879855

Strand: Reverse

Name: 110835400

Synonym: ABO_2539

Alternate gene names: NA

Gene position: 2879855-2879496 (Counterclockwise)

Preceding gene: 110835401

Following gene: 110835398

Centisome position: 92.3

GC content: 55.83

Gene sequence:

>360_bases
TTGCAGAAACTCTACTGGTACTCAATCGCAATGGTGTTGCCAGTGTTGTGGCTGGCCGGCTGTTCCGATGATAGCGCCCC
GGCTAATGGGCCTGCTCAACAGGCCCGCGACGGGGCGCAGTTATATCGCCAATACTGTGTTACCTGTCACGGCTCTGGCG
CCTTGGGGGCTCCCGGTGTAGGTAAGGAGCATCGACCCTACTGGTCCCATGAAATCGAAGAAGACGGTTTCGACGCCCTG
GTCCTAGATGCTATCAATGGCTTCAACTCGATGCCGCCTCGCGGTGGCTGCTTTGACTGTAGCGACGACGAAATTCGCAG
CACGGTGATCTATATGCTGAACAAAAGTGGGGCAAAGTAA

Upstream 100 bases:

>100_bases
GTATTAACGCCATGCCTCCTAAAGGGATGTGCATGGACTGCTCTGACGATGAAATCAACGCTGCCATCGAGTACATGGTT
AGCAAGAGTCAGTAGCGGCT

Downstream 100 bases:

>100_bases
GAAAAGACGCCGCACGCGATATGCTTCGCACAACAACGCGAAATAGTTTGTCTTTTTTATATTGCAAAGAGGCCGCGCCC
CGGACGGGAACGCGGCCTCT

Product: cytochrome c5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MQKLYWYSIAMVLPVLWLAGCSDDSAPANGPAQQARDGAQLYRQYCVTCHGSGALGAPGVGKEHRPYWSHEIEEDGFDAL
VLDAINGFNSMPPRGGCFDCSDDEIRSTVIYMLNKSGAK

Sequences:

>Translated_119_residues
MQKLYWYSIAMVLPVLWLAGCSDDSAPANGPAQQARDGAQLYRQYCVTCHGSGALGAPGVGKEHRPYWSHEIEEDGFDAL
VLDAINGFNSMPPRGGCFDCSDDEIRSTVIYMLNKSGAK
>Mature_119_residues
MQKLYWYSIAMVLPVLWLAGCSDDSAPANGPAQQARDGAQLYRQYCVTCHGSGALGAPGVGKEHRPYWSHEIEEDGFDAL
VLDAINGFNSMPPRGGCFDCSDDEIRSTVIYMLNKSGAK

Specific function: It is unreactive with cytochrome c reductase or oxidase but seems to function as an intermediate in nitrate respiration of facultative anaerobic pseudmonads [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12961; Mature: 12961

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLYWYSIAMVLPVLWLAGCSDDSAPANGPAQQARDGAQLYRQYCVTCHGSGALGAPGV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GKEHRPYWSHEIEEDGFDALVLDAINGFNSMPPRGGCFDCSDDEIRSTVIYMLNKSGAK
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCC
>Mature Secondary Structure
MQKLYWYSIAMVLPVLWLAGCSDDSAPANGPAQQARDGAQLYRQYCVTCHGSGALGAPGV
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GKEHRPYWSHEIEEDGFDALVLDAINGFNSMPPRGGCFDCSDDEIRSTVIYMLNKSGAK
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA