| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is pcoA [H]
Identifier: 110835220
GI number: 110835220
Start: 2682540
End: 2684462
Strand: Direct
Name: pcoA [H]
Synonym: ABO_2359
Alternate gene names: 110835220
Gene position: 2682540-2684462 (Clockwise)
Preceding gene: 110835219
Following gene: 110835221
Centisome position: 85.97
GC content: 58.14
Gene sequence:
>1923_bases ATGAAAACACCATCGCAGATTTCTCTGCCACGGCGCCGTTTCGTGCAGGGCCTAGCACTGGGTGCCGCTGGCCTCGGCGT AGGTCTTAACGCCCGTCAGCTACTGGCCAGCCAGGGCCACACCGGTGCACCGGTTCTTACCGGCAACACCTTCCACCTCA CGCTTGGCGGCGCCGATGTCAATATCACCGGCAAGGCTCGCCCGGCCACCACCATCAATGGCAGCATTCCCGGCCCTACC CTGCGCTGGAAAGAAGGCGACACCGTCACGATCAAAGTGACCAACCTGTTACCGGAAACCAGCTCCATTCACTGGCATGG CCTGCTACTTCCCTTCGAAATGGACGGCGTGCCGGGATTGTCTTTCGACGGTATCGCCCCCGGTGAAACCTTCACCTATT GCTTTCCGGTGAAGCAAAGTGGCACCTACTGGTATCACAGCCATTCCGGCTTTCAGGAGCAAACGGGAATTTATGGTTCC ATCATTATTGATCCGCGCGAACCGGATCGGCACACGGTTGACCGAGACGAGGTGATTCTACTCTCCGATTGGAGCGATGA AGATCCTCACCATGTGTATGCCACGCTGAAAAAGCTCAGCCACTACTACAATTTCAATGAACGCACCGTGTTCGACACCC TGCGCGACTTTCGCAAAAAAGGTGTTATCGACACACTCAAAGACCGCCACATGTGGAACACCATGCGCATGAGCCAAAGC GACCTGGCGGATGTGACGGGTTATACCTACACCTACTTGATGAATGGCCAAAGCCCTGCCGACAACTGGACCTGCCAGTT CAAGCCCGGCGAACGTATCCGCCTGCGCTTTATCAACGCCAGTGCCATGACCTTCTTTGATATTCGCATCCCGGGCCTGG ACATGACCGTGGTCGCCATGGACGGCCAACCGGTAAAACCGGTGGACTTCCATGAAGTCAGGCTAGGGGTAGCGGAAACC TTAGACGTAATCGTGGCGCCCCGAGCAGACCGGGCGTACACCCTATTCGCACAGAGCATCGACCGGAGTGGCTTCAGCCG CGGCACTTTGACCCCGGACCCCGCCATGACTGCCGCGGTCCCGAACATGGATGCACCGCCACCGTTAGGCCATACCGAAA TGGGCATGGGCGCCATGGGTTCGCCGTCAATGAATGCAAAGGGAAGAGCCCACGGTGATATGCACCATGGCGATATGACC CACGCCGACATGAAGATGGACAGCATGGATCACCACACCATGGGCCACAGCGACACCAAGCCCGTGCCCTTTGCCGTTAA CGACAACAACCCGGATTTACCGCCGCGCAACAGCGCCATCGAACATGCAGCCAGCGAATTCGGCCCCGGTGTCGACATGC GCGCCATGGCGCCGGGGGCGATGCTTAACGACCCAGGCATTGGCTTGCGCAACCGGGACTGGAAAGTGCTCACCTATGCA GATCTAGAAACCCTGAGCGACACGCCCAACAACACCCCTATCGACAGTCTTCATCCGGACCGGGAAATTGTATTGCACCT GACCGGTAACATGGACCGTTACATGTGGAGCTTTAACGGCATTAAATTTGCCGACTCCGTGCCCTTGACGCTGTTCCACC ACGAGCGGGTGCGCATCACCCTGGTGAACGACACCATGATGACCCACCCCATCCACCTACACGGACTATGGAGTGACCTG GAACTGGGGGAAGGCAAACTGCTGCGCAAGCACACCATTACCGTCAAACCGGGCGAAAAACTCAGCTACCTAGTACGCGC TGATGCGCTCGGGCGTTGGGCCTATCATTGCCACCTTCTCTACCACATGGAGGCCGGCATGTTCCGCGAGGTTCGTGTGG TTGAAAACGCCCACCCGCCAGCGCCCAACGGCGACCACGCAATGCATGGGGCCCACCGCATGAACGGAGTGAAGCAACCA TGA
Upstream 100 bases:
>100_bases TGATCAGTGCGATTCACGCGGGCATCCACCGGTTGCCGTTACGCCCACCCTCCCTGTTCATTTGAGCTGACCTCTTTCTC AAACGAACAGGATTACGGAA
Downstream 100 bases:
>100_bases AAAAATCGCTCACTTTTCTTGCCAGTATCGTCATCCTTGCCACCGCCTCACCGGCCACGGCTATGAATAAAAAGGAACCA CGCTTCACCCGCATAATCGT
Product: copper resistance protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MKTPSQISLPRRRFVQGLALGAAGLGVGLNARQLLASQGHTGAPVLTGNTFHLTLGGADVNITGKARPATTINGSIPGPT LRWKEGDTVTIKVTNLLPETSSIHWHGLLLPFEMDGVPGLSFDGIAPGETFTYCFPVKQSGTYWYHSHSGFQEQTGIYGS IIIDPREPDRHTVDRDEVILLSDWSDEDPHHVYATLKKLSHYYNFNERTVFDTLRDFRKKGVIDTLKDRHMWNTMRMSQS DLADVTGYTYTYLMNGQSPADNWTCQFKPGERIRLRFINASAMTFFDIRIPGLDMTVVAMDGQPVKPVDFHEVRLGVAET LDVIVAPRADRAYTLFAQSIDRSGFSRGTLTPDPAMTAAVPNMDAPPPLGHTEMGMGAMGSPSMNAKGRAHGDMHHGDMT HADMKMDSMDHHTMGHSDTKPVPFAVNDNNPDLPPRNSAIEHAASEFGPGVDMRAMAPGAMLNDPGIGLRNRDWKVLTYA DLETLSDTPNNTPIDSLHPDREIVLHLTGNMDRYMWSFNGIKFADSVPLTLFHHERVRITLVNDTMMTHPIHLHGLWSDL ELGEGKLLRKHTITVKPGEKLSYLVRADALGRWAYHCHLLYHMEAGMFREVRVVENAHPPAPNGDHAMHGAHRMNGVKQP
Sequences:
>Translated_640_residues MKTPSQISLPRRRFVQGLALGAAGLGVGLNARQLLASQGHTGAPVLTGNTFHLTLGGADVNITGKARPATTINGSIPGPT LRWKEGDTVTIKVTNLLPETSSIHWHGLLLPFEMDGVPGLSFDGIAPGETFTYCFPVKQSGTYWYHSHSGFQEQTGIYGS IIIDPREPDRHTVDRDEVILLSDWSDEDPHHVYATLKKLSHYYNFNERTVFDTLRDFRKKGVIDTLKDRHMWNTMRMSQS DLADVTGYTYTYLMNGQSPADNWTCQFKPGERIRLRFINASAMTFFDIRIPGLDMTVVAMDGQPVKPVDFHEVRLGVAET LDVIVAPRADRAYTLFAQSIDRSGFSRGTLTPDPAMTAAVPNMDAPPPLGHTEMGMGAMGSPSMNAKGRAHGDMHHGDMT HADMKMDSMDHHTMGHSDTKPVPFAVNDNNPDLPPRNSAIEHAASEFGPGVDMRAMAPGAMLNDPGIGLRNRDWKVLTYA DLETLSDTPNNTPIDSLHPDREIVLHLTGNMDRYMWSFNGIKFADSVPLTLFHHERVRITLVNDTMMTHPIHLHGLWSDL ELGEGKLLRKHTITVKPGEKLSYLVRADALGRWAYHCHLLYHMEAGMFREVRVVENAHPPAPNGDHAMHGAHRMNGVKQP >Mature_640_residues MKTPSQISLPRRRFVQGLALGAAGLGVGLNARQLLASQGHTGAPVLTGNTFHLTLGGADVNITGKARPATTINGSIPGPT LRWKEGDTVTIKVTNLLPETSSIHWHGLLLPFEMDGVPGLSFDGIAPGETFTYCFPVKQSGTYWYHSHSGFQEQTGIYGS IIIDPREPDRHTVDRDEVILLSDWSDEDPHHVYATLKKLSHYYNFNERTVFDTLRDFRKKGVIDTLKDRHMWNTMRMSQS DLADVTGYTYTYLMNGQSPADNWTCQFKPGERIRLRFINASAMTFFDIRIPGLDMTVVAMDGQPVKPVDFHEVRLGVAET LDVIVAPRADRAYTLFAQSIDRSGFSRGTLTPDPAMTAAVPNMDAPPPLGHTEMGMGAMGSPSMNAKGRAHGDMHHGDMT HADMKMDSMDHHTMGHSDTKPVPFAVNDNNPDLPPRNSAIEHAASEFGPGVDMRAMAPGAMLNDPGIGLRNRDWKVLTYA DLETLSDTPNNTPIDSLHPDREIVLHLTGNMDRYMWSFNGIKFADSVPLTLFHHERVRITLVNDTMMTHPIHLHGLWSDL ELGEGKLLRKHTITVKPGEKLSYLVRADALGRWAYHCHLLYHMEAGMFREVRVVENAHPPAPNGDHAMHGAHRMNGVKQP
Specific function: Could be involved in copper resistance. May have oxidase activity [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family. CopA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=443, Percent_Identity=24.8306997742664, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17539950, Length=302, Percent_Identity=24.1721854304636, Blast_Score=69, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6320714, Length=341, Percent_Identity=26.3929618768328, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323703, Length=138, Percent_Identity=42.7536231884058, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321067, Length=267, Percent_Identity=28.0898876404494, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24585842, Length=296, Percent_Identity=30.0675675675676, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI221330000, Length=296, Percent_Identity=30.0675675675676, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI281360167, Length=296, Percent_Identity=30.0675675675676, Blast_Score=100, Evalue=6e-21, Organism=Drosophila melanogaster, GI28574104, Length=632, Percent_Identity=24.5253164556962, Blast_Score=99, Evalue=9e-21, Organism=Drosophila melanogaster, GI221329998, Length=296, Percent_Identity=30.0675675675676, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI24650186, Length=312, Percent_Identity=25.9615384615385, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI18859919, Length=272, Percent_Identity=27.9411764705882, Blast_Score=91, Evalue=3e-18,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR006376 - InterPro: IPR002355 - InterPro: IPR008972 - InterPro: IPR006311 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 71056; Mature: 71056
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPSQISLPRRRFVQGLALGAAGLGVGLNARQLLASQGHTGAPVLTGNTFHLTLGGADV CCCCCCCCCCHHHHHHHHHHCCHHCCCCCCHHHHHHCCCCCCCCEEECCEEEEEECCCEE NITGKARPATTINGSIPGPTLRWKEGDTVTIKVTNLLPETSSIHWHGLLLPFEMDGVPGL EEECCCCCCEEECCCCCCCEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCC SFDGIAPGETFTYCFPVKQSGTYWYHSHSGFQEQTGIYGSIIIDPREPDRHTVDRDEVIL CCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHCCCEEEEEECCCCCCCCCCCCCCEEE LSDWSDEDPHHVYATLKKLSHYYNFNERTVFDTLRDFRKKGVIDTLKDRHMWNTMRMSQS EECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH DLADVTGYTYTYLMNGQSPADNWTCQFKPGERIRLRFINASAMTFFDIRIPGLDMTVVAM HHHHCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCEEEEEEEEECCCCEEEEEE DGQPVKPVDFHEVRLGVAETLDVIVAPRADRAYTLFAQSIDRSGFSRGTLTPDPAMTAAV CCCCCCCCCHHHHHHCHHHEEEEEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEEC PNMDAPPPLGHTEMGMGAMGSPSMNAKGRAHGDMHHGDMTHADMKMDSMDHHTMGHSDTK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC PVPFAVNDNNPDLPPRNSAIEHAASEFGPGVDMRAMAPGAMLNDPGIGLRNRDWKVLTYA CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCCCCEEEEEEE DLETLSDTPNNTPIDSLHPDREIVLHLTGNMDRYMWSFNGIKFADSVPLTLFHHERVRIT CHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCEEEECCCCEEEEECCEEEEE LVNDTMMTHPIHLHGLWSDLELGEGKLLRKHTITVKPGEKLSYLVRADALGRWAYHCHLL EECCCEEECCEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEHHHHCCEEEEEEEE YHMEAGMFREVRVVENAHPPAPNGDHAMHGAHRMNGVKQP EEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MKTPSQISLPRRRFVQGLALGAAGLGVGLNARQLLASQGHTGAPVLTGNTFHLTLGGADV CCCCCCCCCCHHHHHHHHHHCCHHCCCCCCHHHHHHCCCCCCCCEEECCEEEEEECCCEE NITGKARPATTINGSIPGPTLRWKEGDTVTIKVTNLLPETSSIHWHGLLLPFEMDGVPGL EEECCCCCCEEECCCCCCCEEEECCCCEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCC SFDGIAPGETFTYCFPVKQSGTYWYHSHSGFQEQTGIYGSIIIDPREPDRHTVDRDEVIL CCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHCCCEEEEEECCCCCCCCCCCCCCEEE LSDWSDEDPHHVYATLKKLSHYYNFNERTVFDTLRDFRKKGVIDTLKDRHMWNTMRMSQS EECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHH DLADVTGYTYTYLMNGQSPADNWTCQFKPGERIRLRFINASAMTFFDIRIPGLDMTVVAM HHHHCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCEEEEEEEEECCCCEEEEEE DGQPVKPVDFHEVRLGVAETLDVIVAPRADRAYTLFAQSIDRSGFSRGTLTPDPAMTAAV CCCCCCCCCHHHHHHCHHHEEEEEEECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCEEEC PNMDAPPPLGHTEMGMGAMGSPSMNAKGRAHGDMHHGDMTHADMKMDSMDHHTMGHSDTK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC PVPFAVNDNNPDLPPRNSAIEHAASEFGPGVDMRAMAPGAMLNDPGIGLRNRDWKVLTYA CCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCCCCEEEEEEE DLETLSDTPNNTPIDSLHPDREIVLHLTGNMDRYMWSFNGIKFADSVPLTLFHHERVRIT CHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCEEEECCCCEEEEECCEEEEE LVNDTMMTHPIHLHGLWSDLELGEGKLLRKHTITVKPGEKLSYLVRADALGRWAYHCHLL EECCCEEECCEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEEHHHHCCEEEEEEEE YHMEAGMFREVRVVENAHPPAPNGDHAMHGAHRMNGVKQP EEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]