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The map label for this gene is yahN [H]

Identifier: 110835218

GI number: 110835218

Start: 2681462

End: 2682124

Strand: Direct

Name: yahN [H]

Synonym: ABO_2357

Alternate gene names: 110835218

Gene position: 2681462-2682124 (Clockwise)

Preceding gene: 110835217

Following gene: 110835219

Centisome position: 85.94

GC content: 59.88

Gene sequence:

>663_bases
ATGCTCTCTTTGCACGACTGGCTGCTGCTGGCTAGCGTTTGCGCCCTTGGCGCCATAACCCCGGGCATTAGCCTGGCCGT
GATCACTCGCCACACCCTGCTGGGCGGCCATAAAGCGGGGGTCACTGCAGCCATTGCCCACGCCATTGGCGTGGGTTTCT
GGGCCACCGCCACCGTCACCGGCTTAGCCGTGCTGTTTCACCGTTACCCCAAACTAGAATTGCTGTTCAGCCTCACCGGC
GCGCTGTTTCTGCTGTGGATGGCATGGAAAAGCTGGCAAGCGGGCCGCGCTCCCCTTAATAGCACTCCCTTAGATACCAA
CGTGGAGGCCCACCATGGCGCCGCCCGCGATGGTTTTCTTGTGGCCTTCCTTAACCCCAAAGTCGCGTTGTTTTTTCTCG
CGCTGTTCAGCCAGTTTCTGCAAGCCGACATGGGCCAACTGGCCCGCGCACAGATGGTGCTTACTGCCATCTTCATCGAT
GGTGGCTGGTATGTGCTGGTGGCTATCCTGCTGGGACGCAGCCGTCTTTTGCCCTGGTTACGAGCGCATCACCACTGGGT
GGAACGCGCCACCGCAATACTGCTGGTGATCATTGCCGCCAGTGTGGTCGTCAACAGCCTGCTTGACCTTGGGGTGGCCC
CAAGGTTAATAATGCCGGCATGA

Upstream 100 bases:

>100_bases
CTAGCCAACGCCTCGCGTGCCTTTTCGCTTGCAGTCTGTAACCCTTCAACCTGTCATAGCAACACGTTACAGTGCCCGCT
TTCCCCTAACGAGATTCTCC

Downstream 100 bases:

>100_bases
CCAGTGTGCGCCAACAACAACGTCGGGCAGCCATTGCCTCCTTGCTCGCCATCATTCTGATGGCCGTGAGCACCTTGTTG
TCCGCCAACACCATGACCAT

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLSLHDWLLLASVCALGAITPGISLAVITRHTLLGGHKAGVTAAIAHAIGVGFWATATVTGLAVLFHRYPKLELLFSLTG
ALFLLWMAWKSWQAGRAPLNSTPLDTNVEAHHGAARDGFLVAFLNPKVALFFLALFSQFLQADMGQLARAQMVLTAIFID
GGWYVLVAILLGRSRLLPWLRAHHHWVERATAILLVIIAASVVVNSLLDLGVAPRLIMPA

Sequences:

>Translated_220_residues
MLSLHDWLLLASVCALGAITPGISLAVITRHTLLGGHKAGVTAAIAHAIGVGFWATATVTGLAVLFHRYPKLELLFSLTG
ALFLLWMAWKSWQAGRAPLNSTPLDTNVEAHHGAARDGFLVAFLNPKVALFFLALFSQFLQADMGQLARAQMVLTAIFID
GGWYVLVAILLGRSRLLPWLRAHHHWVERATAILLVIIAASVVVNSLLDLGVAPRLIMPA
>Mature_220_residues
MLSLHDWLLLASVCALGAITPGISLAVITRHTLLGGHKAGVTAAIAHAIGVGFWATATVTGLAVLFHRYPKLELLFSLTG
ALFLLWMAWKSWQAGRAPLNSTPLDTNVEAHHGAARDGFLVAFLNPKVALFFLALFSQFLQADMGQLARAQMVLTAIFID
GGWYVLVAILLGRSRLLPWLRAHHHWVERATAILLVIIAASVVVNSLLDLGVAPRLIMPA

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1786522, Length=149, Percent_Identity=29.5302013422819, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23750; Mature: 23750

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLHDWLLLASVCALGAITPGISLAVITRHTLLGGHKAGVTAAIAHAIGVGFWATATVT
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GLAVLFHRYPKLELLFSLTGALFLLWMAWKSWQAGRAPLNSTPLDTNVEAHHGAARDGFL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VAFLNPKVALFFLALFSQFLQADMGQLARAQMVLTAIFIDGGWYVLVAILLGRSRLLPWL
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
RAHHHWVERATAILLVIIAASVVVNSLLDLGVAPRLIMPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLSLHDWLLLASVCALGAITPGISLAVITRHTLLGGHKAGVTAAIAHAIGVGFWATATVT
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
GLAVLFHRYPKLELLFSLTGALFLLWMAWKSWQAGRAPLNSTPLDTNVEAHHGAARDGFL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
VAFLNPKVALFFLALFSQFLQADMGQLARAQMVLTAIFIDGGWYVLVAILLGRSRLLPWL
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHH
RAHHHWVERATAILLVIIAASVVVNSLLDLGVAPRLIMPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]