| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835217
Identifier: 110835217
GI number: 110835217
Start: 2680818
End: 2681312
Strand: Direct
Name: 110835217
Synonym: ABO_2356
Alternate gene names: NA
Gene position: 2680818-2681312 (Clockwise)
Preceding gene: 110835216
Following gene: 110835218
Centisome position: 85.92
GC content: 58.59
Gene sequence:
>495_bases ATGATGAAATACTTGCTCACACTCTTCACCGCTCTATTGCTGGCCGCCTGCGGCGATAACACCCCACCCAAGCCCGACGT GGCACAGGAACAAACGCCCGCCACCGCAGCCAATGCCACCAAAACATTGGAAGTGTATAAGTCCCCCACCTGCGGCTGCT GCGGTGCCTGGGTAGAACACATGGAAGCGAACGGTTACACGGTGAATGTCCACGAGCAGCAAAACCTGCAATCCATAAAA GAAAAAGCGGGCATCCTGCCCGGCACCGGCTCCTGCCATACGGCTTTTATCGACGGCTACGCCATTGAAGGGCATGTGCC CGCCAGCGACGTGGATCGCTTGCTGAAAGAGCGCCCCGAAGGCAAAGGCCTCACCGTGCCCGGCATGCCCGTAGGCTCAC CCGGAATGGAAATGGGCGACCGCAAAGACGCCTATGATGTGCTGCTGTTCGATGAAAACGGCGCCCAGGTGTTTAGCCAC CACCCGGGGAATTGA
Upstream 100 bases:
>100_bases GCTTCACCTGCCAAATGCAGATGTATCAGGGCACACTGATCGTCGAATAATCGCGGCCCAATCCCCCCAACTGGGGGGTG CATTAACAACGAAGGAAACG
Downstream 100 bases:
>100_bases GCAAAACCGCCAAGCTGCAAGCGACAATATGGGCACGGCAACATCCTCACTAGCCAACGCCTCGCGTGCCTTTTCGCTTG CAGTCTGTAACCCTTCAACC
Product: metal-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MMKYLLTLFTALLLAACGDNTPPKPDVAQEQTPATAANATKTLEVYKSPTCGCCGAWVEHMEANGYTVNVHEQQNLQSIK EKAGILPGTGSCHTAFIDGYAIEGHVPASDVDRLLKERPEGKGLTVPGMPVGSPGMEMGDRKDAYDVLLFDENGAQVFSH HPGN
Sequences:
>Translated_164_residues MMKYLLTLFTALLLAACGDNTPPKPDVAQEQTPATAANATKTLEVYKSPTCGCCGAWVEHMEANGYTVNVHEQQNLQSIK EKAGILPGTGSCHTAFIDGYAIEGHVPASDVDRLLKERPEGKGLTVPGMPVGSPGMEMGDRKDAYDVLLFDENGAQVFSH HPGN >Mature_164_residues MMKYLLTLFTALLLAACGDNTPPKPDVAQEQTPATAANATKTLEVYKSPTCGCCGAWVEHMEANGYTVNVHEQQNLQSIK EKAGILPGTGSCHTAFIDGYAIEGHVPASDVDRLLKERPEGKGLTVPGMPVGSPGMEMGDRKDAYDVLLFDENGAQVFSH HPGN
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17516; Mature: 17516
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKYLLTLFTALLLAACGDNTPPKPDVAQEQTPATAANATKTLEVYKSPTCGCCGAWVEH CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHH MEANGYTVNVHEQQNLQSIKEKAGILPGTGSCHTAFIDGYAIEGHVPASDVDRLLKERPE HCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHCCC GKGLTVPGMPVGSPGMEMGDRKDAYDVLLFDENGAQVFSHHPGN CCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCC >Mature Secondary Structure MMKYLLTLFTALLLAACGDNTPPKPDVAQEQTPATAANATKTLEVYKSPTCGCCGAWVEH CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCHHHHHHHH MEANGYTVNVHEQQNLQSIKEKAGILPGTGSCHTAFIDGYAIEGHVPASDVDRLLKERPE HCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHHCCC GKGLTVPGMPVGSPGMEMGDRKDAYDVLLFDENGAQVFSHHPGN CCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA