| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835201
Identifier: 110835201
GI number: 110835201
Start: 2665280
End: 2665798
Strand: Direct
Name: 110835201
Synonym: ABO_2340
Alternate gene names: NA
Gene position: 2665280-2665798 (Clockwise)
Preceding gene: 110835200
Following gene: 110835202
Centisome position: 85.42
GC content: 54.53
Gene sequence:
>519_bases ATGAATATTGCGACGACACACTCCATGACCGAATCTCCGCAGGAACGCTTGGCCGCTATTCTCGATAGCCACCAGCCCTC CTCCATTTTGACTGTCAGCCTCAATCCCATTCCTGTCGTTGCCCAGTGGTGCGCCGATCACAACTGCACTCTGGTGGAAA TTCAGGAACAGAACCCCTTCCCCGCGTTGGGTGACATTGACCGGGTGGATATCGCCATTGTTGCAGACCAGCTGGAATAC ATGCCCCACCATGACGGCGAAGCACTAATGGGCTTGTTGCGTAACCTGCATACCGATTCCATGGTGGCGGTATACCAACC CACCTTGGCCCCACAAAAACTACGTTGGCCAACCAACGGATTTCTGGCACTAGGCTGCCGGGAGCAGGGGCACTTCGCCG AAGACGGTCGCGAACTGAATATCTACAGCTACGACCTGGACAACTACAATTTCGAGCGCAAGTGGAACAACCCCCGCTTC TGGGCCAATCCGGAAAATTGGGGAAAATACTGGTGGTAA
Upstream 100 bases:
>100_bases AAAGACCGTCGGAGCATTCATTGCTGCATTACATCAAAAACCACAAATCGCTACTCAACCCTCTATCGAAAGCCACCGGC AATGGCGTTAAACTGAAGCC
Downstream 100 bases:
>100_bases CCTTTAGGCCGCGCTGCAGTGTGGAAATGGGCGCGGCGCTGTCGTATGGTTGCGCCGTCGACTGAATTGATGGCTCACCA TGATTGGACACCGTTTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNIATTHSMTESPQERLAAILDSHQPSSILTVSLNPIPVVAQWCADHNCTLVEIQEQNPFPALGDIDRVDIAIVADQLEY MPHHDGEALMGLLRNLHTDSMVAVYQPTLAPQKLRWPTNGFLALGCREQGHFAEDGRELNIYSYDLDNYNFERKWNNPRF WANPENWGKYWW
Sequences:
>Translated_172_residues MNIATTHSMTESPQERLAAILDSHQPSSILTVSLNPIPVVAQWCADHNCTLVEIQEQNPFPALGDIDRVDIAIVADQLEY MPHHDGEALMGLLRNLHTDSMVAVYQPTLAPQKLRWPTNGFLALGCREQGHFAEDGRELNIYSYDLDNYNFERKWNNPRF WANPENWGKYWW >Mature_172_residues MNIATTHSMTESPQERLAAILDSHQPSSILTVSLNPIPVVAQWCADHNCTLVEIQEQNPFPALGDIDRVDIAIVADQLEY MPHHDGEALMGLLRNLHTDSMVAVYQPTLAPQKLRWPTNGFLALGCREQGHFAEDGRELNIYSYDLDNYNFERKWNNPRF WANPENWGKYWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19776; Mature: 19776
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIATTHSMTESPQERLAAILDSHQPSSILTVSLNPIPVVAQWCADHNCTLVEIQEQNPF CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEEECCCCC PALGDIDRVDIAIVADQLEYMPHHDGEALMGLLRNLHTDSMVAVYQPTLAPQKLRWPTNG CCCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCC FLALGCREQGHFAEDGRELNIYSYDLDNYNFERKWNNPRFWANPENWGKYWW EEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCEEECCCCCCCCCCC >Mature Secondary Structure MNIATTHSMTESPQERLAAILDSHQPSSILTVSLNPIPVVAQWCADHNCTLVEIQEQNPF CCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEEECCCCC PALGDIDRVDIAIVADQLEYMPHHDGEALMGLLRNLHTDSMVAVYQPTLAPQKLRWPTNG CCCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCCC FLALGCREQGHFAEDGRELNIYSYDLDNYNFERKWNNPRFWANPENWGKYWW EEEEECCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA