The gene/protein map for NC_008260 is currently unavailable.
Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110835118

Identifier: 110835118

GI number: 110835118

Start: 2577440

End: 2577814

Strand: Direct

Name: 110835118

Synonym: ABO_2258

Alternate gene names: NA

Gene position: 2577440-2577814 (Clockwise)

Preceding gene: 110835113

Following gene: 110835130

Centisome position: 82.61

GC content: 51.2

Gene sequence:

>375_bases
ATGATGGAAGTTCTGAGAAAAAGAAGGGGTTTAGCATACCTGTTGCTAGTACTGCTGCAAGGTCTGCTGGCCGCCTGTGA
CAACGCTCTACCAGAGCAGGCCATCAGCAAAGCACTGGCAGAGATAAAAAAGGGCATTGAAGAAGGCGACACCAGCACAA
TAATGGGCCTAGTGGCCGATAACATTACCGTGGAGCGACGCGGGCGAACGCTGAGCCGCAAGGAAATTCAACGCACCCTA
GTCGATTTTTTTCCGCTACCCAAACCGCAACATCTCATTCACACGCATCAATATTGCACTGGACCTGGTGACACAGGAGC
AAGCACGCGTACAATTTACCGTGCTGCCCTGGGGTGGAAAAAATGTGTTTCCTGA

Upstream 100 bases:

>100_bases
GCTGCCCTGTGGATTGCCGCTTTCCTCCACATACAGTTGATGCCCCTCGCCTACGGGAAGATAAAACTGCCGGTTAGCAT
CCAAATAAGGGAATAACGCC

Downstream 100 bases:

>100_bases
GGATGCCGAGAGCTACCAAATGGACAGTCACTGGCAGCTGAACGGCGGCTGGAAAATAAAAAACCTGAAGACCGGCACAT
AATATGTGTCCGTTTTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVADNITVERRGRTLSRKEIQRTL
VDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWKKCVS

Sequences:

>Translated_124_residues
MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVADNITVERRGRTLSRKEIQRTL
VDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWKKCVS
>Mature_124_residues
MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVADNITVERRGRTLSRKEIQRTL
VDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWKKCVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13746; Mature: 13746

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVAD
CHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
NITVERRGRTLSRKEIQRTLVDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWK
CCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KCVS
HHCC
>Mature Secondary Structure
MMEVLRKRRGLAYLLLVLLQGLLAACDNALPEQAISKALAEIKKGIEEGDTSTIMGLVAD
CHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
NITVERRGRTLSRKEIQRTLVDFFPLPKPQHLIHTHQYCTGPGDTGASTRTIYRAALGWK
CCHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
KCVS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA