| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is merA [H]
Identifier: 110835044
GI number: 110835044
Start: 2491161
End: 2493305
Strand: Direct
Name: merA [H]
Synonym: ABO_2183
Alternate gene names: 110835044
Gene position: 2491161-2493305 (Clockwise)
Preceding gene: 110835043
Following gene: 110835045
Centisome position: 79.84
GC content: 54.36
Gene sequence:
>2145_bases ATGAGTATCAAAAAAGGCCTCCTCTTCACTGCCCTAGCCGCGCTGATTGCCTGCTACTTTGTTTTTGATCTCGGCCAATA TTTCAGCCTGGATTATATCAAGCAGCAGCAAAGTGCCTTTGATGCTCTCTATCAGGATAATCCCGCGCTCATTCTCGGCG GCTTCTTCGGGCTATATGTGCTGGTCACCGCATTGAGCCTACCCGGCGCTGCCATCATGACCCTGGCAGCCGGGGCGCTG TTCGGTTTCTGGATCGCTCTGGTGATGGTTTCATTTGCCTCCTCTGCCGGCGCGACCTTGGCGTTCTTAGCATCGCGCTT TTTATTCCATGATGCGGTTCAGAGCCGCTTCGGCGAACGGCTGAAAAAACTCAACGAAGGGGTTAAGAAAGAAGGCGCAT TTTATCTTTTCACTCTGCGTTTGGTGCCGGTGGTGCCGTTTTTTATCATTAACTTGGTAATGGGGTTAACGCCCATCAAA GCACGCACCTTCTACTGGGTCAGCCAAGTCGGCATGCTGGCGGGCACGGCCGTCTATGTAAACGCCGGAACCCAGCTCGG CCAAATTGACAGTCTTAAAGGACTGCTGTCTGTAGAACTCATCGGCGCCTTTGTGTTGCTCGGCATATTCCCCTGGATCG CCAAGGGCATCATGGCTCGCGTGCAAGCACGCAAAGTCTATAAAGGCTGGAAGAAACCGAAACAATTCGACCGCAACCTG ATCGTTATCGGGGCAGGGGCCGCAGGCCTAGTAAGCGCCTACATTGCCGCCACCGTGAAAGCGAAAGTGACCCTGATCGA AAAACACAAAATGGGGGGCGACTGCCTGAACACTGGATGCGTACCCTCTAAGGCATTAATCAAAAGCGCCCGTGTTGCGT TCAATGACAAGCAGGCCGAAAAGTACGGCTTCGAGGCTATCAATAGCCGCTTCCGCTTCTCCAGCATGATGGAGCGGGTT CAACAGGTGATCGAGAAAATTGAACCCCATGATTCCGTGGAGCGTTATAGCGAACTAGGGGTGGACTGCCGTCAAGGCGA AGCGCGCTTCCTCTCGCCCTGGGAAGTGGAAATCCGCAACGGCGATCACGTGGAAACCCTCACCGCCCGCAGCATTATTA TTGCCTCCGGCGCCCGCCCCTTTGTGCCACCGATTCCGGGCATCGAAGACATCGATATCCTCACCTCCGACAACCTTTGG CAGATTGAAGAACAACCCAAACGACTACTGGTACTGGGTGGCGGCCCCATCGGTTGTGAGCTAGCCCAGACCTTTGCCCG CCTGGGCAGCGAAGTCACCCAAATCGAAATGCTACCCCGACTGATGATTCGTGAAGATGCGGAAGCCAGCGAGATTGTCA CCCGCTCACTAAAGGAAAGCGGCGTACACGTACTTACTAATCACAAAGCCGTTCGGTTCAGCGAAGAGAACAGCGAGAAA GTATTATTGGTTGAACACGATGGCAAAGAAACTGCCCTGCCTTTTGACCAGGTGCTAGTGGCCGTGGGTCGCAAGGCCAA CACTGATGGCCTAGGCCTGGATGCCCTGCAATTGCCCACCGAGACCAATGGCACTATCCAGACCAATGATCGCCTACAAA GCCGCTACCCCAACATCTATGCCTGTGGCGATGTGGCCGGCCCGTACCAGTTCACCCATACCGCCGCCCACCAAGCCTGG TATGCCAGCGTCAATGCCCTGTTTGGTTTCCTGAAAAGTTTCAAGGTGGATTACCGGGTGATCCCCTGGTGCACCTTTAC CGACCCGGAAGTGGCGCGCGTGGGCGTCAACGAGCAAGAAGCTGACGAACAAGGCATCGAATACGACATCACTCGTTACG GGATTGATGATCTGGACCGAGCTATTGCCGACAGTGCGGACCTTGGCTATGTAAAAGTCCTCACTGCCAAAGGCAGCGAC AAAATCTTGGGTGTCACCATCGTTGGCCAGCATGCGGGTGAATTGATCAGCGAATATGTGCTGGCCATGAAACACGGGCT AGGCCTGAACAAGATCCTCGGCACCATCCACATTTACCCGACCATGGCCGAGGCTAACAAGTTTGCCGCCGGAGAATGGA AAAAAGCACGCAAGCCTGAAGGACTGTTACGTTGGGTAGAACGGATTCATAACGTGCGACGATAA
Upstream 100 bases:
>100_bases TGTTGCTAAGTCACAGGTCTCTTCATGGTTGTAACATCCGGCCAGAAAAACCATCAAACCGTCATGCTTACTCTTATACG CACCACTAACAGGACCTGAC
Downstream 100 bases:
>100_bases GCGGTCTCTGAAGAACACCTTTCATGCTTTGGCAGACCGCACTTGCATGGCAAAAACCAGTAGGAGTAACTATGTTTATG CGCTTGCTAATATCCTTGTT
Product: mercuric reductase
Products: NA
Alternate protein names: Hg(II) reductase [H]
Number of amino acids: Translated: 714; Mature: 713
Protein sequence:
>714_residues MSIKKGLLFTALAALIACYFVFDLGQYFSLDYIKQQQSAFDALYQDNPALILGGFFGLYVLVTALSLPGAAIMTLAAGAL FGFWIALVMVSFASSAGATLAFLASRFLFHDAVQSRFGERLKKLNEGVKKEGAFYLFTLRLVPVVPFFIINLVMGLTPIK ARTFYWVSQVGMLAGTAVYVNAGTQLGQIDSLKGLLSVELIGAFVLLGIFPWIAKGIMARVQARKVYKGWKKPKQFDRNL IVIGAGAAGLVSAYIAATVKAKVTLIEKHKMGGDCLNTGCVPSKALIKSARVAFNDKQAEKYGFEAINSRFRFSSMMERV QQVIEKIEPHDSVERYSELGVDCRQGEARFLSPWEVEIRNGDHVETLTARSIIIASGARPFVPPIPGIEDIDILTSDNLW QIEEQPKRLLVLGGGPIGCELAQTFARLGSEVTQIEMLPRLMIREDAEASEIVTRSLKESGVHVLTNHKAVRFSEENSEK VLLVEHDGKETALPFDQVLVAVGRKANTDGLGLDALQLPTETNGTIQTNDRLQSRYPNIYACGDVAGPYQFTHTAAHQAW YASVNALFGFLKSFKVDYRVIPWCTFTDPEVARVGVNEQEADEQGIEYDITRYGIDDLDRAIADSADLGYVKVLTAKGSD KILGVTIVGQHAGELISEYVLAMKHGLGLNKILGTIHIYPTMAEANKFAAGEWKKARKPEGLLRWVERIHNVRR
Sequences:
>Translated_714_residues MSIKKGLLFTALAALIACYFVFDLGQYFSLDYIKQQQSAFDALYQDNPALILGGFFGLYVLVTALSLPGAAIMTLAAGAL FGFWIALVMVSFASSAGATLAFLASRFLFHDAVQSRFGERLKKLNEGVKKEGAFYLFTLRLVPVVPFFIINLVMGLTPIK ARTFYWVSQVGMLAGTAVYVNAGTQLGQIDSLKGLLSVELIGAFVLLGIFPWIAKGIMARVQARKVYKGWKKPKQFDRNL IVIGAGAAGLVSAYIAATVKAKVTLIEKHKMGGDCLNTGCVPSKALIKSARVAFNDKQAEKYGFEAINSRFRFSSMMERV QQVIEKIEPHDSVERYSELGVDCRQGEARFLSPWEVEIRNGDHVETLTARSIIIASGARPFVPPIPGIEDIDILTSDNLW QIEEQPKRLLVLGGGPIGCELAQTFARLGSEVTQIEMLPRLMIREDAEASEIVTRSLKESGVHVLTNHKAVRFSEENSEK VLLVEHDGKETALPFDQVLVAVGRKANTDGLGLDALQLPTETNGTIQTNDRLQSRYPNIYACGDVAGPYQFTHTAAHQAW YASVNALFGFLKSFKVDYRVIPWCTFTDPEVARVGVNEQEADEQGIEYDITRYGIDDLDRAIADSADLGYVKVLTAKGSD KILGVTIVGQHAGELISEYVLAMKHGLGLNKILGTIHIYPTMAEANKFAAGEWKKARKPEGLLRWVERIHNVRR >Mature_713_residues SIKKGLLFTALAALIACYFVFDLGQYFSLDYIKQQQSAFDALYQDNPALILGGFFGLYVLVTALSLPGAAIMTLAAGALF GFWIALVMVSFASSAGATLAFLASRFLFHDAVQSRFGERLKKLNEGVKKEGAFYLFTLRLVPVVPFFIINLVMGLTPIKA RTFYWVSQVGMLAGTAVYVNAGTQLGQIDSLKGLLSVELIGAFVLLGIFPWIAKGIMARVQARKVYKGWKKPKQFDRNLI VIGAGAAGLVSAYIAATVKAKVTLIEKHKMGGDCLNTGCVPSKALIKSARVAFNDKQAEKYGFEAINSRFRFSSMMERVQ QVIEKIEPHDSVERYSELGVDCRQGEARFLSPWEVEIRNGDHVETLTARSIIIASGARPFVPPIPGIEDIDILTSDNLWQ IEEQPKRLLVLGGGPIGCELAQTFARLGSEVTQIEMLPRLMIREDAEASEIVTRSLKESGVHVLTNHKAVRFSEENSEKV LLVEHDGKETALPFDQVLVAVGRKANTDGLGLDALQLPTETNGTIQTNDRLQSRYPNIYACGDVAGPYQFTHTAAHQAWY ASVNALFGFLKSFKVDYRVIPWCTFTDPEVARVGVNEQEADEQGIEYDITRYGIDDLDRAIADSADLGYVKVLTAKGSDK ILGVTIVGQHAGELISEYVLAMKHGLGLNKILGTIHIYPTMAEANKFAAGEWKKARKPEGLLRWVERIHNVRR
Specific function: Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0) [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=462, Percent_Identity=31.3852813852814, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI50301238, Length=464, Percent_Identity=28.2327586206897, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI33519430, Length=437, Percent_Identity=25.4004576659039, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI33519428, Length=437, Percent_Identity=25.4004576659039, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI33519426, Length=437, Percent_Identity=25.4004576659039, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI148277065, Length=437, Percent_Identity=25.4004576659039, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI291045266, Length=428, Percent_Identity=28.7383177570093, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI148277071, Length=437, Percent_Identity=25.4004576659039, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI22035672, Length=433, Percent_Identity=27.4826789838337, Blast_Score=116, Evalue=9e-26, Organism=Homo sapiens, GI291045268, Length=425, Percent_Identity=26.5882352941176, Blast_Score=101, Evalue=2e-21, Organism=Escherichia coli, GI1786307, Length=462, Percent_Identity=31.1688311688312, Blast_Score=198, Evalue=1e-51, Organism=Escherichia coli, GI87082354, Length=463, Percent_Identity=30.2375809935205, Blast_Score=182, Evalue=9e-47, Organism=Escherichia coli, GI87081717, Length=448, Percent_Identity=27.0089285714286, Blast_Score=155, Evalue=8e-39, Organism=Escherichia coli, GI1789915, Length=442, Percent_Identity=29.6380090497738, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI87081964, Length=195, Percent_Identity=24.6153846153846, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI1789065, Length=183, Percent_Identity=30.6010928961749, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI32565766, Length=465, Percent_Identity=35.4838709677419, Blast_Score=243, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17557007, Length=468, Percent_Identity=28.8461538461538, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71983429, Length=431, Percent_Identity=25.754060324826, Blast_Score=112, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71983419, Length=431, Percent_Identity=25.754060324826, Blast_Score=112, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71982272, Length=449, Percent_Identity=25.3897550111359, Blast_Score=109, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17532687, Length=160, Percent_Identity=26.875, Blast_Score=83, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6321091, Length=476, Percent_Identity=31.3025210084034, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6325166, Length=466, Percent_Identity=27.8969957081545, Blast_Score=158, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6325240, Length=469, Percent_Identity=24.9466950959488, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI21358499, Length=459, Percent_Identity=32.244008714597, Blast_Score=219, Evalue=5e-57, Organism=Drosophila melanogaster, GI24640551, Length=502, Percent_Identity=28.8844621513944, Blast_Score=154, Evalue=3e-37, Organism=Drosophila melanogaster, GI24640553, Length=504, Percent_Identity=28.5714285714286, Blast_Score=153, Evalue=4e-37, Organism=Drosophila melanogaster, GI24640549, Length=486, Percent_Identity=28.6008230452675, Blast_Score=153, Evalue=5e-37, Organism=Drosophila melanogaster, GI17737741, Length=498, Percent_Identity=29.1164658634538, Blast_Score=144, Evalue=2e-34,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000815 - InterPro: IPR021179 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00403 HMA; PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.16.1.1 [H]
Molecular weight: Translated: 78646; Mature: 78515
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKKGLLFTALAALIACYFVFDLGQYFSLDYIKQQQSAFDALYQDNPALILGGFFGLYV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH LVTALSLPGAAIMTLAAGALFGFWIALVMVSFASSAGATLAFLASRFLFHDAVQSRFGER HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LKKLNEGVKKEGAFYLFTLRLVPVVPFFIINLVMGLTPIKARTFYWVSQVGMLAGTAVYV HHHHHHCHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEE NAGTQLGQIDSLKGLLSVELIGAFVLLGIFPWIAKGIMARVQARKVYKGWKKPKQFDRNL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCE IVIGAGAAGLVSAYIAATVKAKVTLIEKHKMGGDCLNTGCVPSKALIKSARVAFNDKQAE EEEECCHHHHHHHHHHHHHHHHEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH KYGFEAINSRFRFSSMMERVQQVIEKIEPHDSVERYSELGVDCRQGEARFLSPWEVEIRN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECC GDHVETLTARSIIIASGARPFVPPIPGIEDIDILTSDNLWQIEEQPKRLLVLGGGPIGCE CCCEEHHHHCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEECCCCCCHH LAQTFARLGSEVTQIEMLPRLMIREDAEASEIVTRSLKESGVHVLTNHKAVRFSEENSEK HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCEEEECCCCCCE VLLVEHDGKETALPFDQVLVAVGRKANTDGLGLDALQLPTETNGTIQTNDRLQSRYPNIY EEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEECCHHHHHCCCEE ACGDVAGPYQFTHTAAHQAWYASVNALFGFLKSFKVDYRVIPWCTFTDPEVARVGVNEQE EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHCCCCCHHH ADEQGIEYDITRYGIDDLDRAIADSADLGYVKVLTAKGSDKILGVTIVGQHAGELISEYV HHHCCCCEEEHHCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHH LAMKHGLGLNKILGTIHIYPTMAEANKFAAGEWKKARKPEGLLRWVERIHNVRR HHHHHCCCHHHHHHHEEEEEEHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SIKKGLLFTALAALIACYFVFDLGQYFSLDYIKQQQSAFDALYQDNPALILGGFFGLYV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH LVTALSLPGAAIMTLAAGALFGFWIALVMVSFASSAGATLAFLASRFLFHDAVQSRFGER HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LKKLNEGVKKEGAFYLFTLRLVPVVPFFIINLVMGLTPIKARTFYWVSQVGMLAGTAVYV HHHHHHCHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEE NAGTQLGQIDSLKGLLSVELIGAFVLLGIFPWIAKGIMARVQARKVYKGWKKPKQFDRNL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCE IVIGAGAAGLVSAYIAATVKAKVTLIEKHKMGGDCLNTGCVPSKALIKSARVAFNDKQAE EEEECCHHHHHHHHHHHHHHHHEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH KYGFEAINSRFRFSSMMERVQQVIEKIEPHDSVERYSELGVDCRQGEARFLSPWEVEIRN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECC GDHVETLTARSIIIASGARPFVPPIPGIEDIDILTSDNLWQIEEQPKRLLVLGGGPIGCE CCCEEHHHHCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEECCCCCCHH LAQTFARLGSEVTQIEMLPRLMIREDAEASEIVTRSLKESGVHVLTNHKAVRFSEENSEK HHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCEEEECCCCCCE VLLVEHDGKETALPFDQVLVAVGRKANTDGLGLDALQLPTETNGTIQTNDRLQSRYPNIY EEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEECCHHHHHCCCEE ACGDVAGPYQFTHTAAHQAWYASVNALFGFLKSFKVDYRVIPWCTFTDPEVARVGVNEQE EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHCCCCCHHH ADEQGIEYDITRYGIDDLDRAIADSADLGYVKVLTAKGSDKILGVTIVGQHAGELISEYV HHHCCCCEEEHHCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECHHHHHHHHHHH LAMKHGLGLNKILGTIHIYPTMAEANKFAAGEWKKARKPEGLLRWVERIHNVRR HHHHHCCCHHHHHHHEEEEEEHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037534 [H]