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The map label for this gene is yejB [H]

Identifier: 110636406

GI number: 110636406

Start: 4391755

End: 4392855

Strand: Reverse

Name: yejB [H]

Synonym: Meso_4082

Alternate gene names: 110636406

Gene position: 4392855-4391755 (Counterclockwise)

Preceding gene: 110636407

Following gene: 110636405

Centisome position: 99.56

GC content: 59.13

Gene sequence:

>1101_bases
ATGGGAGCCTACATCCTCCGCCGCCTGCTTCTTATGATCCCGACCCTGTTCGGCATCATGGCCATTTCCTTCATCGTCAT
TCAGTTCGCGCCGGGTGGCCCGGTGGAGCAGGTCATAGCCCAGGTCACAGGCCAAGGAGGCGGGGCCGATGCCCGCATCG
GCGGTGGCGGAGGAGACGCGGGCGCTCAGAATTTCGAGGCGGCGGGCGGCGCGAATTCCCGCTATCGCGGGGCGCAGGGG
CTCGATCCGGAATTCATTGCCCAGCTTGAAAAGCAGTTCGGCTTCGACAAGCCTCCCCTGGAACGCTTCGGGCTGATGCT
CTGGAACTATATCCGGTTCGATTTCGGCGAGAGTTATTTCCGCGATATTTCGGTCGTCGACCTGATCCTTGAGAAGATGC
CGGTCTCGATCTCCCTCGGCCTCTGGATCACGCTGCTCTCCTACGGCATTTCCATTCCGCTCGGCATCCGCAAGGCCGTT
AAGGACGGAACGCCCTTCGACGTCTGGACCAGCGGGATCGTCATTGTCGCATATGCGATTCCGAGCTTTCTCTTCGCGAT
TCTGCTTATGGTTCTCTTCGCCGGCGGCTCTTTCTTCGACTGGTTTCCCCTGCGCGGACTGACATCGGACAACTGGAGCT
CGCTATCCTGGCCGGAACGAATCCTGGACTACTTCTGGCACCTTGCCTTGCCGCTGACGGCGCTTGTGCTATCCGCCTTC
GCCACGACGACCCTGCTCACCAAGAACTCCTTCCTCGATGAGATCCGGAAACAGTACGTCGTCACAGCCCGCGCGAAAGG
CTTGTCAGACCGGCAGGTGCTCTATGGACATGTTTTCCGCAACGCCATGCTGCTTATCATTGCCGGCTTTCCAGGAGCCT
TCATTTCCTCCTTCTTCACCGGCTCGCTCCTGATCGAAAGCATCTTTTCGCTGGACGGGCTGGGCCTGCTCGGCTTTCGC
TCTGTGATTGACCGCGATTATCCCGTGGTGTTTGCCACGCTCTATATCTTCTCGCTCATGGGCCTGATCATCAGTCTTGT
CTCCGACCTCACCTACACGCTCATCGACCCGCGCATCGATTTCGAGCGGAGGGATGTCTAG

Upstream 100 bases:

>100_bases
GTGGTGGTACGACGAGGAAAAGGCCAAAACGATTGGAAAAGCGTAAAATCGGCGTGACTGTCATCCTCGCTGGAACATCA
CCGAATGGGGCAATCGGCTG

Downstream 100 bases:

>100_bases
ATGTCTGAAATACAGGCGAAGGCACAGGTGGAGAGGGTGCGCGAGGAAGTATCGCGGCCCTGGCTTTCACCCATCAACCA
ACGCCGCTGGCAGAATTTCA

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MGAYILRRLLLMIPTLFGIMAISFIVIQFAPGGPVEQVIAQVTGQGGGADARIGGGGGDAGAQNFEAAGGANSRYRGAQG
LDPEFIAQLEKQFGFDKPPLERFGLMLWNYIRFDFGESYFRDISVVDLILEKMPVSISLGLWITLLSYGISIPLGIRKAV
KDGTPFDVWTSGIVIVAYAIPSFLFAILLMVLFAGGSFFDWFPLRGLTSDNWSSLSWPERILDYFWHLALPLTALVLSAF
ATTTLLTKNSFLDEIRKQYVVTARAKGLSDRQVLYGHVFRNAMLLIIAGFPGAFISSFFTGSLLIESIFSLDGLGLLGFR
SVIDRDYPVVFATLYIFSLMGLIISLVSDLTYTLIDPRIDFERRDV

Sequences:

>Translated_366_residues
MGAYILRRLLLMIPTLFGIMAISFIVIQFAPGGPVEQVIAQVTGQGGGADARIGGGGGDAGAQNFEAAGGANSRYRGAQG
LDPEFIAQLEKQFGFDKPPLERFGLMLWNYIRFDFGESYFRDISVVDLILEKMPVSISLGLWITLLSYGISIPLGIRKAV
KDGTPFDVWTSGIVIVAYAIPSFLFAILLMVLFAGGSFFDWFPLRGLTSDNWSSLSWPERILDYFWHLALPLTALVLSAF
ATTTLLTKNSFLDEIRKQYVVTARAKGLSDRQVLYGHVFRNAMLLIIAGFPGAFISSFFTGSLLIESIFSLDGLGLLGFR
SVIDRDYPVVFATLYIFSLMGLIISLVSDLTYTLIDPRIDFERRDV
>Mature_365_residues
GAYILRRLLLMIPTLFGIMAISFIVIQFAPGGPVEQVIAQVTGQGGGADARIGGGGGDAGAQNFEAAGGANSRYRGAQGL
DPEFIAQLEKQFGFDKPPLERFGLMLWNYIRFDFGESYFRDISVVDLILEKMPVSISLGLWITLLSYGISIPLGIRKAVK
DGTPFDVWTSGIVIVAYAIPSFLFAILLMVLFAGGSFFDWFPLRGLTSDNWSSLSWPERILDYFWHLALPLTALVLSAFA
TTTLLTKNSFLDEIRKQYVVTARAKGLSDRQVLYGHVFRNAMLLIIAGFPGAFISSFFTGSLLIESIFSLDGLGLLGFRS
VIDRDYPVVFATLYIFSLMGLIISLVSDLTYTLIDPRIDFERRDV

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=60.989010989011, Blast_Score=458, Evalue=1e-130,
Organism=Escherichia coli, GI1789965, Length=379, Percent_Identity=28.2321899736148, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1787497, Length=362, Percent_Identity=28.1767955801105, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1789888, Length=359, Percent_Identity=25.9052924791086, Blast_Score=121, Evalue=9e-29,
Organism=Escherichia coli, GI1787053, Length=367, Percent_Identity=27.7929155313352, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787550, Length=287, Percent_Identity=25.4355400696864, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787761, Length=292, Percent_Identity=25.3424657534247, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40373; Mature: 40241

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAYILRRLLLMIPTLFGIMAISFIVIQFAPGGPVEQVIAQVTGQGGGADARIGGGGGDA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCC
GAQNFEAAGGANSRYRGAQGLDPEFIAQLEKQFGFDKPPLERFGLMLWNYIRFDFGESYF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHH
RDISVVDLILEKMPVSISLGLWITLLSYGISIPLGIRKAVKDGTPFDVWTSGIVIVAYAI
HHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHH
PSFLFAILLMVLFAGGSFFDWFPLRGLTSDNWSSLSWPERILDYFWHLALPLTALVLSAF
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ATTTLLTKNSFLDEIRKQYVVTARAKGLSDRQVLYGHVFRNAMLLIIAGFPGAFISSFFT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHH
GSLLIESIFSLDGLGLLGFRSVIDRDYPVVFATLYIFSLMGLIISLVSDLTYTLIDPRID
HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FERRDV
CCCCCC
>Mature Secondary Structure 
GAYILRRLLLMIPTLFGIMAISFIVIQFAPGGPVEQVIAQVTGQGGGADARIGGGGGDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCC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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]