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The map label for this gene is ybhP [H]

Identifier: 110636350

GI number: 110636350

Start: 4329667

End: 4330464

Strand: Reverse

Name: ybhP [H]

Synonym: Meso_4026

Alternate gene names: 110636350

Gene position: 4330464-4329667 (Counterclockwise)

Preceding gene: 110636352

Following gene: 110636345

Centisome position: 98.14

GC content: 61.03

Gene sequence:

>798_bases
ATGAGAGTACAGGACGCGAATGAGAAAGGCCCCCGCCATGGGCTGTCCGAGCATGCAACCATGCGGGTGATGACCTGGAA
CATCCATGGCGGGATTGGTCCGGACGGACGGCGCGACCTGCAAAGGGTTGTGGATCTCGTCCGCAAGCACGATCCGGACC
TCGTGGCCCTGCAAGAGGTTGGCTCCAGGCGCAAAGTCACGGATGCGGCCGAGGCTTTCACTTTTCTCCTCAGTACGCTT
GGCAACCATGCAACCGAGACCCGGCTCATTACGGCGCCAGACGGGAACTACGGCCACGCCCTGATTTGCCGGTGGCCGCT
CCGAAGTACGGTCTGCCACGACATTTCCTACCGCAAACGTGAGCGCCGTGCGGCCATAGAGGCGGTGGCCGAGACACCAT
TCGGCCCCTTGCACGTGGTTGCCGCGCATCTCGGATTGAGCTTCAGGGAACGCAGGCACCAGGCACAATTGCTGGCAGAT
CTGGTACGGTCGGGATCGGCACCGACCGTTCTCATGGGCGACCTCAACGATTGGGTTTGGAGCGGCTCCGTGCAGACCCT
GCTCAACCGTCTCTTCCCTGGCCATACCCATTTCAAGACCTTTCCCGCATTCTGGCCCGTTTTCGCGCTTGACCGCATCT
ATTGCCGGCCAGGCGGAATGCTGGCGCGGCAATGGACCGATCCGCAAGCGCGAACCGCATCCGACCATTTGCCGGTGATC
GCCGAATTACGGATGGAAGAAGGTCTCTCGTCAGGAAGGACCGGGAAGACCTTATTCGAAGATGATAGCGGGGGTTGA

Upstream 100 bases:

>100_bases
ATGACCGTGAATGCAACGCGCGGGACCAGCTTTCAGATCCGGGCCGCTACAAAAACTCACCCGCCGTTCAACAATCCGGC
GGCTCATGCGTTGAGCGGAA

Downstream 100 bases:

>100_bases
ACCGGCGGCCGCCTTCTCCGCCTCCAGTCTCTCCAGCACCTTTTGCGCCACGGCGCGGTAGGTTTTCGCCTGCGCGCCTT
CGGGATCGGATACCACCACC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRVQDANEKGPRHGLSEHATMRVMTWNIHGGIGPDGRRDLQRVVDLVRKHDPDLVALQEVGSRRKVTDAAEAFTFLLSTL
GNHATETRLITAPDGNYGHALICRWPLRSTVCHDISYRKRERRAAIEAVAETPFGPLHVVAAHLGLSFRERRHQAQLLAD
LVRSGSAPTVLMGDLNDWVWSGSVQTLLNRLFPGHTHFKTFPAFWPVFALDRIYCRPGGMLARQWTDPQARTASDHLPVI
AELRMEEGLSSGRTGKTLFEDDSGG

Sequences:

>Translated_265_residues
MRVQDANEKGPRHGLSEHATMRVMTWNIHGGIGPDGRRDLQRVVDLVRKHDPDLVALQEVGSRRKVTDAAEAFTFLLSTL
GNHATETRLITAPDGNYGHALICRWPLRSTVCHDISYRKRERRAAIEAVAETPFGPLHVVAAHLGLSFRERRHQAQLLAD
LVRSGSAPTVLMGDLNDWVWSGSVQTLLNRLFPGHTHFKTFPAFWPVFALDRIYCRPGGMLARQWTDPQARTASDHLPVI
AELRMEEGLSSGRTGKTLFEDDSGG
>Mature_265_residues
MRVQDANEKGPRHGLSEHATMRVMTWNIHGGIGPDGRRDLQRVVDLVRKHDPDLVALQEVGSRRKVTDAAEAFTFLLSTL
GNHATETRLITAPDGNYGHALICRWPLRSTVCHDISYRKRERRAAIEAVAETPFGPLHVVAAHLGLSFRERRHQAQLLAD
LVRSGSAPTVLMGDLNDWVWSGSVQTLLNRLFPGHTHFKTFPAFWPVFALDRIYCRPGGMLARQWTDPQARTASDHLPVI
AELRMEEGLSSGRTGKTLFEDDSGG

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=258, Percent_Identity=29.0697674418605, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 29582; Mature: 29582

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVQDANEKGPRHGLSEHATMRVMTWNIHGGIGPDGRRDLQRVVDLVRKHDPDLVALQEV
CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHC
GSRRKVTDAAEAFTFLLSTLGNHATETRLITAPDGNYGHALICRWPLRSTVCHDISYRKR
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHH
ERRAAIEAVAETPFGPLHVVAAHLGLSFRERRHQAQLLADLVRSGSAPTVLMGDLNDWVW
HHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHC
SGSVQTLLNRLFPGHTHFKTFPAFWPVFALDRIYCRPGGMLARQWTDPQARTASDHLPVI
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHH
AELRMEEGLSSGRTGKTLFEDDSGG
HHHHHHHCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MRVQDANEKGPRHGLSEHATMRVMTWNIHGGIGPDGRRDLQRVVDLVRKHDPDLVALQEV
CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHC
GSRRKVTDAAEAFTFLLSTLGNHATETRLITAPDGNYGHALICRWPLRSTVCHDISYRKR
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHH
ERRAAIEAVAETPFGPLHVVAAHLGLSFRERRHQAQLLADLVRSGSAPTVLMGDLNDWVW
HHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHC
SGSVQTLLNRLFPGHTHFKTFPAFWPVFALDRIYCRPGGMLARQWTDPQARTASDHLPVI
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHH
AELRMEEGLSSGRTGKTLFEDDSGG
HHHHHHHCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]