| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is zur [H]
Identifier: 110636327
GI number: 110636327
Start: 4309872
End: 4310306
Strand: Reverse
Name: zur [H]
Synonym: Meso_4003
Alternate gene names: 110636327
Gene position: 4310306-4309872 (Counterclockwise)
Preceding gene: 110636328
Following gene: 110636319
Centisome position: 97.69
GC content: 59.77
Gene sequence:
>435_bases ATGACGACCCACCCGGAGCTCACACGCAACCAATCTTTGGTGCTCAAGACGCTCGGCAGGGCGGAAAGCCCGCTCAGCGC CTATACCATTCTCGACCGGCTCCGGGATGACGGCTTCCGCGCGCCGCTCCAGGTTTATCGGGCGCTTGAGAAGCTGCAGG AATTCGGCCTCGTTCACCGGCTAGAGAGCATCAATGCCTTCGTTGCCTGCGCCGATCCTCACTGTCATGGCCATTCCATG ATCGCATTCGCGATATGCGAGACCTGTGGTCGTGTCGACGAGTTTTCAGACGAGACCGTCGAAGCGCGGCTCGGCGAGTG GGTGACGGCCAACGGTTTCAAACCGGCCAAAACGACCATCGAAATCCGTGGCAACTGCGCCGCTTGCTCGGCGGCAATTC AGGCGCCTAAGGGATTAGAACAATCCGTCCTTTGA
Upstream 100 bases:
>100_bases CAGGCCCGTCGATCGTCGTCGCGGCTCTCATCCTCTTTCTCCTGAGCCTGGTGCGTCTGCCCTGGCGGCAGACGGCGCCG CTCAATACCGGAGGAAAAAT
Downstream 100 bases:
>100_bases AAGCTGGATCGCCGCCGGCCCGAGAATGATCGCAAAAAGCACCGGCAGGAAAAATAGGATCATCGGCACCGTCAGTTTGG GCGGCAGGGCTGCTGCCTTT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Zinc uptake regulator [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTTHPELTRNQSLVLKTLGRAESPLSAYTILDRLRDDGFRAPLQVYRALEKLQEFGLVHRLESINAFVACADPHCHGHSM IAFAICETCGRVDEFSDETVEARLGEWVTANGFKPAKTTIEIRGNCAACSAAIQAPKGLEQSVL
Sequences:
>Translated_144_residues MTTHPELTRNQSLVLKTLGRAESPLSAYTILDRLRDDGFRAPLQVYRALEKLQEFGLVHRLESINAFVACADPHCHGHSM IAFAICETCGRVDEFSDETVEARLGEWVTANGFKPAKTTIEIRGNCAACSAAIQAPKGLEQSVL >Mature_143_residues TTHPELTRNQSLVLKTLGRAESPLSAYTILDRLRDDGFRAPLQVYRALEKLQEFGLVHRLESINAFVACADPHCHGHSMI AFAICETCGRVDEFSDETVEARLGEWVTANGFKPAKTTIEIRGNCAACSAAIQAPKGLEQSVL
Specific function: Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes (znuACB) [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI87082363, Length=126, Percent_Identity=38.8888888888889, Blast_Score=71, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15815; Mature: 15684
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHPELTRNQSLVLKTLGRAESPLSAYTILDRLRDDGFRAPLQVYRALEKLQEFGLVHR CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LESINAFVACADPHCHGHSMIAFAICETCGRVDEFSDETVEARLGEWVTANGFKPAKTTI HHHHCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEECCCCCCCCEEE EIRGNCAACSAAIQAPKGLEQSVL EECCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTHPELTRNQSLVLKTLGRAESPLSAYTILDRLRDDGFRAPLQVYRALEKLQEFGLVHR CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH LESINAFVACADPHCHGHSMIAFAICETCGRVDEFSDETVEARLGEWVTANGFKPAKTTI HHHHCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEECCCCCCCCEEE EIRGNCAACSAAIQAPKGLEQSVL EECCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 9680209 [H]