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The map label for this gene is yhcV [H]

Identifier: 110636213

GI number: 110636213

Start: 4192097

End: 4192750

Strand: Reverse

Name: yhcV [H]

Synonym: Meso_3889

Alternate gene names: 110636213

Gene position: 4192750-4192097 (Counterclockwise)

Preceding gene: 110636214

Following gene: 110636212

Centisome position: 95.02

GC content: 67.89

Gene sequence:

>654_bases
ATGCGCGTGCGAGATGTGATGTCGACCCAGCTGGTCACGATCAGCCCCGAGCACAGCGTCTGGCACGCCGCGCAGATCAT
GCTCACCAAACACGTCAGCGGCCTGCCCGTGCTTGATGACGGCCAGGTCATGGTCGGCCTGCTGACCGAGGGCGACCTGC
TGCGACGCTCCGAACTGGGAACCCCCCTCGGCGATGAAGGGGCGCAGGAGCGCGCCCGCGCCTATGTCCAAAGCCGGAGC
TGGAAGGTTGGCGCGCTCATGTCCTCTCCCGTCCTCACGATCGGGGAGGACGCCCCGCTGTCCCGGGTGGCGATGCTCCT
CGGCGTTCACCGGATCAAGCGCCTGCCTGTTCTCCGCGACACGCAGCTGGTGGGGATCGTCAGCCGGGCGGACCTCCTCA
AGGTTATCTCGGCGGGCGGACCGGAGGCCGAGATCAGGGGCGACGAGGCCGTCCGACGCGCACTGAACGCTCGCCTCGCG
GAGGCCGGGAGCGTCCTGAGCCGTCAGCCGGAACTGCACGTCGAGGCCGGCAGGGTGCGCGTGGCTGGCGCAATGCGATC
GGCCGCAGAGCTCGAGGTCGTGCGGATGGTGGTCGACAGCGTCGTGGGATCGGGGTTTATGGACGAACTGACGATCGAGA
AGGAGCATGAATGA

Upstream 100 bases:

>100_bases
TGAAGCAGGCGATCAGCAAGATCGGCCCGTCCTTCAATTCTCATCGGATGATGCAGCGCTACGTCACCGAAGCCTATCTG
CGATGACAGGGGGACGAGCG

Downstream 100 bases:

>100_bases
GGGTCGTTCTGTTCGAGGCGGAGGATTGGGAGAAAAAGGCCTGCGCACCCCTGATGCGCCGGCACGATGTCCGCTGCACG
ACAGCTCCGCTCAACTTCAC

Product: signal-transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MRVRDVMSTQLVTISPEHSVWHAAQIMLTKHVSGLPVLDDGQVMVGLLTEGDLLRRSELGTPLGDEGAQERARAYVQSRS
WKVGALMSSPVLTIGEDAPLSRVAMLLGVHRIKRLPVLRDTQLVGIVSRADLLKVISAGGPEAEIRGDEAVRRALNARLA
EAGSVLSRQPELHVEAGRVRVAGAMRSAAELEVVRMVVDSVVGSGFMDELTIEKEHE

Sequences:

>Translated_217_residues
MRVRDVMSTQLVTISPEHSVWHAAQIMLTKHVSGLPVLDDGQVMVGLLTEGDLLRRSELGTPLGDEGAQERARAYVQSRS
WKVGALMSSPVLTIGEDAPLSRVAMLLGVHRIKRLPVLRDTQLVGIVSRADLLKVISAGGPEAEIRGDEAVRRALNARLA
EAGSVLSRQPELHVEAGRVRVAGAMRSAAELEVVRMVVDSVVGSGFMDELTIEKEHE
>Mature_217_residues
MRVRDVMSTQLVTISPEHSVWHAAQIMLTKHVSGLPVLDDGQVMVGLLTEGDLLRRSELGTPLGDEGAQERARAYVQSRS
WKVGALMSSPVLTIGEDAPLSRVAMLLGVHRIKRLPVLRDTQLVGIVSRADLLKVISAGGPEAEIRGDEAVRRALNARLA
EAGSVLSRQPELHVEAGRVRVAGAMRSAAELEVVRMVVDSVVGSGFMDELTIEKEHE

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 23493; Mature: 23493

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVRDVMSTQLVTISPEHSVWHAAQIMLTKHVSGLPVLDDGQVMVGLLTEGDLLRRSELG
CCCHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCHHHHHHCC
TPLGDEGAQERARAYVQSRSWKVGALMSSPVLTIGEDAPLSRVAMLLGVHRIKRLPVLRD
CCCCCCHHHHHHHHHHHHCCCEEEEHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCC
TQLVGIVSRADLLKVISAGGPEAEIRGDEAVRRALNARLAEAGSVLSRQPELHVEAGRVR
CHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEE
VAGAMRSAAELEVVRMVVDSVVGSGFMDELTIEKEHE
EHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC
>Mature Secondary Structure
MRVRDVMSTQLVTISPEHSVWHAAQIMLTKHVSGLPVLDDGQVMVGLLTEGDLLRRSELG
CCCHHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCHHHHHHCC
TPLGDEGAQERARAYVQSRSWKVGALMSSPVLTIGEDAPLSRVAMLLGVHRIKRLPVLRD
CCCCCCHHHHHHHHHHHHCCCEEEEHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCC
TQLVGIVSRADLLKVISAGGPEAEIRGDEAVRRALNARLAEAGSVLSRQPELHVEAGRVR
CHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEE
VAGAMRSAAELEVVRMVVDSVVGSGFMDELTIEKEHE
EHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]