Click here to switch to the map view.

The map label for this gene is 110636211

Identifier: 110636211

GI number: 110636211

Start: 4190420

End: 4191088

Strand: Reverse

Name: 110636211

Synonym: Meso_3887

Alternate gene names: NA

Gene position: 4191088-4190420 (Counterclockwise)

Preceding gene: 110636212

Following gene: 110636207

Centisome position: 94.98

GC content: 62.93

Gene sequence:

>669_bases
ATGTGCCTGTCCGCAGAGGTCAGTCTGGGCGCCGCGGCTATTCTCATCCCGACCGGGGCGGTTGCCGCCGCCTCCGCCTG
GCGGCGGGATCGCCGCTACCTGATGATCGCGACTCTGCCATTTCTGTTCGGGCTGCAGCAACTGGTGGAAGGCCTGATCT
GGATCGAGGGCCGTGCCGGTAATGCGCATCACGTCGCTCAATACTCGCTCCTCTTTATGTTCTTCACCTGGATCGCCTGG
CCGATCTGGGTGCCGGTTTCAGCCTACTTTCTCGAGCGCGGCGCGCGGCGGAACGTCATCCTGCTGTTCGTGATTGCGGG
AGCGATGCTGGGCGGCCTGCAATTCATTCCCTATTTCGTACATGACGGCTGGCTGACGACGACGTTCCTGCGCTGGGCGG
TCCGCTACCAGGACATCAACCTGCTCGACGGGCTCGTCTCGCGGAACGTGACCTACGCGATCTACGTCACCGTCGTCATC
GTGCCGTTCCTGCTGGTGCGCAGCCGGGAGATCAAGGTGTTCGGCCTGCTGGTCGCCGGCGTCCTCGTCGTCACGTATGT
GTTCTTCTCCTACGCCTACATCTCGGTGTTCTGCTTCGGCGGCGCGGTGATCTCCACCTATTTGCTCGCACTGATGTGGC
GCAGGCGGTCGACGCCCGTATTGGCGTGA

Upstream 100 bases:

>100_bases
AATACCGACGCCGCCCTCCGGCGAATCATAGATACCACCATCGCCAATATCGAAGGGTTTGCGGCCGGACAGCTCGTCAA
TCTGGTCCAGGCTGGCTGAG

Downstream 100 bases:

>100_bases
TCGGGTCCGTACGTTCGCATTGCTAGAGTGTGCCGGGCGAAGCACGCGAAGGTAAGGCCGAGATCGCGACGGCGAATCCG
CCCTTATGCACCTGGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MCLSAEVSLGAAAILIPTGAVAAASAWRRDRRYLMIATLPFLFGLQQLVEGLIWIEGRAGNAHHVAQYSLLFMFFTWIAW
PIWVPVSAYFLERGARRNVILLFVIAGAMLGGLQFIPYFVHDGWLTTTFLRWAVRYQDINLLDGLVSRNVTYAIYVTVVI
VPFLLVRSREIKVFGLLVAGVLVVTYVFFSYAYISVFCFGGAVISTYLLALMWRRRSTPVLA

Sequences:

>Translated_222_residues
MCLSAEVSLGAAAILIPTGAVAAASAWRRDRRYLMIATLPFLFGLQQLVEGLIWIEGRAGNAHHVAQYSLLFMFFTWIAW
PIWVPVSAYFLERGARRNVILLFVIAGAMLGGLQFIPYFVHDGWLTTTFLRWAVRYQDINLLDGLVSRNVTYAIYVTVVI
VPFLLVRSREIKVFGLLVAGVLVVTYVFFSYAYISVFCFGGAVISTYLLALMWRRRSTPVLA
>Mature_222_residues
MCLSAEVSLGAAAILIPTGAVAAASAWRRDRRYLMIATLPFLFGLQQLVEGLIWIEGRAGNAHHVAQYSLLFMFFTWIAW
PIWVPVSAYFLERGARRNVILLFVIAGAMLGGLQFIPYFVHDGWLTTTFLRWAVRYQDINLLDGLVSRNVTYAIYVTVVI
VPFLLVRSREIKVFGLLVAGVLVVTYVFFSYAYISVFCFGGAVISTYLLALMWRRRSTPVLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24984; Mature: 24984

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLSAEVSLGAAAILIPTGAVAAASAWRRDRRYLMIATLPFLFGLQQLVEGLIWIEGRAG
CCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHEEEECCCC
NAHHVAQYSLLFMFFTWIAWPIWVPVSAYFLERGARRNVILLFVIAGAMLGGLQFIPYFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HDGWLTTTFLRWAVRYQDINLLDGLVSRNVTYAIYVTVVIVPFLLVRSREIKVFGLLVAG
HCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLVVTYVFFSYAYISVFCFGGAVISTYLLALMWRRRSTPVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCLSAEVSLGAAAILIPTGAVAAASAWRRDRRYLMIATLPFLFGLQQLVEGLIWIEGRAG
CCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHEEEECCCC
NAHHVAQYSLLFMFFTWIAWPIWVPVSAYFLERGARRNVILLFVIAGAMLGGLQFIPYFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
HDGWLTTTFLRWAVRYQDINLLDGLVSRNVTYAIYVTVVIVPFLLVRSREIKVFGLLVAG
HCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLVVTYVFFSYAYISVFCFGGAVISTYLLALMWRRRSTPVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA