BacMap

Definition	Mesorhizobium sp. BNC1, complete genome.
Accession	NC_008254
Length	4,412,446

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The map label for this gene is gabD [H]

Identifier: 110636091

GI number: 110636091

Start: 4068904

End: 4070355

Strand: Reverse

Name: gabD [H]

Synonym: Meso_3766

Alternate gene names: 110636091

Gene position: 4070355-4068904 (Counterclockwise)

Preceding gene: 110636093

Following gene: 110636090

Centisome position: 92.25

GC content: 62.47

Gene sequence:

>1452_bases
ATGAGCGGTCGCAAATATCCCAACCCTTCGCTGTTCATAAACGGCCGGTCCGTCACGGGCCGGGGTGCGAAGGAAGAGAT
GGTCATCGATCCTTCGAACGAAGAGGTACTCGGCAGCTATCGCTCGGCTGCACCCGAGGATTTGCAGGAGCTGTTGGACT
CCGCAGCTGCGGGTTTCGAGAAATGGCGGAGGACTTCTGCATATGAGAGATGTGAGATCCTTCACAAGGTCGCGGCCGCG
CTGCGCGAAAATGCGCAGGAGATAGGATCTCTGCTGACGCTTGAAACGGGCAAGATTCTCTCCGAATCGATAACGGAAGT
GCGCGGCGCTGCCGACCATTTCGACTGGTCAGGCGAAGAGGGGCGGCGGCTTTATGGCTACACCGTTCCGGCCCGCCGCG
CGGAAAGCCGGCTCCGCGTCGAGCTGGAGCCGCTTGGGATCGTGTTTGCGCTCATCCCATGGAACTTTCCCCTCGGAACC
TCGGCGCGCAAGGTTGCCCCCGCTCTCGCGGCGGGCTGCAGCGTCATCCTGCGCCCGCCCGAGGAAGCGCCGGCCACTGT
AGAAGCGTTTGTTCGCTGCTGCCAGGAGGCAGGTCTTCCTCCTGGTGTGCTCAACATGGTGCTTGGCAGCCCGAAGGATG
TGGTTGAACCCCTGATGGCATCCTTCTCGGTGCGGGCCGTAACCTTCACGGGCTCGACGCGCGTCGGCAAGATTCTGATT
CAGCAAGCCGCGGACACGGTCAAGCATCTCGTCCTCGAACTGGGCGGACATGCGCCGGCAATCGTGCTGCCGGATGCCGA
CCCCAAGAAGGTCGGCGTTGCAGCGGCACGGGCCAAGTTCCGCAATGCGGGCCAGGTGTGCGTGTCCCCCAGCCGCTTCA
TCGTTCACGAGAAGATCGTCGAGCCCTTCACCCAGGCAATGGTCGAGGAAACGCGCTCCATCAAGCTTGGAAGTGGGTTT
GACGCGGGAGCGCAGATGGGACCGCTCACCACCGCACGTCAGCGCGAGCGGGTGGAAAGGCTGGTCGAGGACGCACGCTC
GAAAGGTGCGCGCATCCTTGCCGGCGGCCAGCGCCCATCCGGATTTAACCGTGGCTTCTTTTTCGAGCCCACGGTTCTGG
GAGACGTGCCGGATACGGCTCTCATCTTCGAGGAAGAACCGTTCGGGCCGGTAGCACCGATCATCCCCGTCCGGTCCGTG
CAAGAGGCGGTCGAGAAGGCGAACGCGGTCAAATGGGGGCTTGCGGGCTACCTGTTCACCTCATCGCTAGCTGATGCGAC
GAAAGTTTCCGAAGCCATGCAGGTGGGCATGGTGGGCCTGAACACCTTCGCCGCGGCCGCTCCCGAAGCTCCGTTCGGAG
GCGTCAAGGAGAGCGGTTACGGCCGCGAATGTGGCCTCGAAGGCATTCGCGAGTTCGTCTCTTCAAAACTCATCCACACG
GATATTGGCTGA

Upstream 100 bases:

>100_bases
TTGTCGGAATCATTCAATATATTGTCGCGAAGGTCCGGGACATTTGCCTGCTTTCAAAACAAAAACGCTTAGGCACAAAG
ACAACGCTGAGGCGCCACCC

Downstream 100 bases:

>100_bases
ATATTGGAAGCTGCCCCCTGGGGGGTCCTTTCGAACAATCCAAGGAGTACGCAAAGTGAGGCTCCATGCATTTCTGCTTG
GGCAGTCCGCCGAGCAGACA

Product: aldehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSGRKYPNPSLFINGRSVTGRGAKEEMVIDPSNEEVLGSYRSAAPEDLQELLDSAAAGFEKWRRTSAYERCEILHKVAAA
LRENAQEIGSLLTLETGKILSESITEVRGAADHFDWSGEEGRRLYGYTVPARRAESRLRVELEPLGIVFALIPWNFPLGT
SARKVAPALAAGCSVILRPPEEAPATVEAFVRCCQEAGLPPGVLNMVLGSPKDVVEPLMASFSVRAVTFTGSTRVGKILI
QQAADTVKHLVLELGGHAPAIVLPDADPKKVGVAAARAKFRNAGQVCVSPSRFIVHEKIVEPFTQAMVEETRSIKLGSGF
DAGAQMGPLTTARQRERVERLVEDARSKGARILAGGQRPSGFNRGFFFEPTVLGDVPDTALIFEEEPFGPVAPIIPVRSV
QEAVEKANAVKWGLAGYLFTSSLADATKVSEAMQVGMVGLNTFAAAAPEAPFGGVKESGYGRECGLEGIREFVSSKLIHT
DIG

Sequences:

>Translated_483_residues
MSGRKYPNPSLFINGRSVTGRGAKEEMVIDPSNEEVLGSYRSAAPEDLQELLDSAAAGFEKWRRTSAYERCEILHKVAAA
LRENAQEIGSLLTLETGKILSESITEVRGAADHFDWSGEEGRRLYGYTVPARRAESRLRVELEPLGIVFALIPWNFPLGT
SARKVAPALAAGCSVILRPPEEAPATVEAFVRCCQEAGLPPGVLNMVLGSPKDVVEPLMASFSVRAVTFTGSTRVGKILI
QQAADTVKHLVLELGGHAPAIVLPDADPKKVGVAAARAKFRNAGQVCVSPSRFIVHEKIVEPFTQAMVEETRSIKLGSGF
DAGAQMGPLTTARQRERVERLVEDARSKGARILAGGQRPSGFNRGFFFEPTVLGDVPDTALIFEEEPFGPVAPIIPVRSV
QEAVEKANAVKWGLAGYLFTSSLADATKVSEAMQVGMVGLNTFAAAAPEAPFGGVKESGYGRECGLEGIREFVSSKLIHT
DIG
>Mature_482_residues
SGRKYPNPSLFINGRSVTGRGAKEEMVIDPSNEEVLGSYRSAAPEDLQELLDSAAAGFEKWRRTSAYERCEILHKVAAAL
RENAQEIGSLLTLETGKILSESITEVRGAADHFDWSGEEGRRLYGYTVPARRAESRLRVELEPLGIVFALIPWNFPLGTS
ARKVAPALAAGCSVILRPPEEAPATVEAFVRCCQEAGLPPGVLNMVLGSPKDVVEPLMASFSVRAVTFTGSTRVGKILIQ
QAADTVKHLVLELGGHAPAIVLPDADPKKVGVAAARAKFRNAGQVCVSPSRFIVHEKIVEPFTQAMVEETRSIKLGSGFD
AGAQMGPLTTARQRERVERLVEDARSKGARILAGGQRPSGFNRGFFFEPTVLGDVPDTALIFEEEPFGPVAPIIPVRSVQ
EAVEKANAVKWGLAGYLFTSSLADATKVSEAMQVGMVGLNTFAAAAPEAPFGGVKESGYGRECGLEGIREFVSSKLIHTD
IG

Specific function: Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=456, Percent_Identity=38.3771929824561, Blast_Score=298, Evalue=6e-81,
Organism=Homo sapiens, GI25777721, Length=469, Percent_Identity=37.5266524520256, Blast_Score=291, Evalue=1e-78,
Organism=Homo sapiens, GI25777730, Length=481, Percent_Identity=35.1351351351351, Blast_Score=282, Evalue=4e-76,
Organism=Homo sapiens, GI153266822, Length=478, Percent_Identity=32.0083682008368, Blast_Score=268, Evalue=1e-71,
Organism=Homo sapiens, GI25777724, Length=479, Percent_Identity=33.8204592901879, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI21361176, Length=488, Percent_Identity=32.172131147541, Blast_Score=265, Evalue=7e-71,
Organism=Homo sapiens, GI25777732, Length=477, Percent_Identity=31.8658280922432, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI25777728, Length=421, Percent_Identity=35.3919239904988, Blast_Score=253, Evalue=4e-67,
Organism=Homo sapiens, GI238814322, Length=479, Percent_Identity=31.7327766179541, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI21614513, Length=481, Percent_Identity=32.2245322245322, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI115387104, Length=470, Percent_Identity=31.063829787234, Blast_Score=235, Evalue=9e-62,
Organism=Homo sapiens, GI12007648, Length=473, Percent_Identity=30.8668076109937, Blast_Score=231, Evalue=9e-61,
Organism=Homo sapiens, GI25777726, Length=479, Percent_Identity=31.5240083507307, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI11095441, Length=477, Percent_Identity=26.6247379454927, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI25952152, Length=468, Percent_Identity=27.7777777777778, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI310128103, Length=453, Percent_Identity=27.8145695364238, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI188035924, Length=453, Percent_Identity=27.8145695364238, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI310128093, Length=452, Percent_Identity=27.8761061946903, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI301500698, Length=281, Percent_Identity=34.8754448398576, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI73695881, Length=326, Percent_Identity=32.2085889570552, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI73695879, Length=326, Percent_Identity=32.2085889570552, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI4502043, Length=325, Percent_Identity=32.6153846153846, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI238814371, Length=325, Percent_Identity=32.6153846153846, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI71773324, Length=325, Percent_Identity=32.6153846153846, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI206597441, Length=342, Percent_Identity=30.7017543859649, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI206597439, Length=342, Percent_Identity=30.7017543859649, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI22907049, Length=342, Percent_Identity=30.7017543859649, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI310128091, Length=452, Percent_Identity=25.4424778761062, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI223972651, Length=464, Percent_Identity=26.0775862068966, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI73466520, Length=335, Percent_Identity=28.0597014925373, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI4557303, Length=335, Percent_Identity=28.0597014925373, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI310128087, Length=278, Percent_Identity=28.7769784172662, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI310128089, Length=295, Percent_Identity=27.1186440677966, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI310128097, Length=255, Percent_Identity=29.4117647058824, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI238859541, Length=441, Percent_Identity=26.7573696145125, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI25777736, Length=441, Percent_Identity=26.7573696145125, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI25777734, Length=441, Percent_Identity=26.7573696145125, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI310128095, Length=294, Percent_Identity=25.8503401360544, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI223972653, Length=465, Percent_Identity=23.6559139784946, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI310128099, Length=222, Percent_Identity=28.3783783783784, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI310128101, Length=222, Percent_Identity=28.3783783783784, Blast_Score=90, Evalue=4e-18,
Organism=Escherichia coli, GI1789015, Length=467, Percent_Identity=37.6873661670236, Blast_Score=337, Evalue=1e-93,
Organism=Escherichia coli, GI1787684, Length=470, Percent_Identity=33.1914893617021, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1786504, Length=476, Percent_Identity=33.8235294117647, Blast_Score=258, Evalue=7e-70,
Organism=Escherichia coli, GI87081926, Length=459, Percent_Identity=33.7690631808279, Blast_Score=258, Evalue=8e-70,
Organism=Escherichia coli, GI1787558, Length=473, Percent_Identity=32.76955602537, Blast_Score=245, Evalue=6e-66,
Organism=Escherichia coli, GI87081896, Length=477, Percent_Identity=32.0754716981132, Blast_Score=244, Evalue=9e-66,
Organism=Escherichia coli, GI1787715, Length=464, Percent_Identity=32.5431034482759, Blast_Score=238, Evalue=5e-64,
Organism=Escherichia coli, GI87082295, Length=483, Percent_Identity=32.5051759834368, Blast_Score=232, Evalue=4e-62,
Organism=Escherichia coli, GI1787250, Length=453, Percent_Identity=28.9183222958057, Blast_Score=164, Evalue=2e-41,
Organism=Escherichia coli, GI1788042, Length=466, Percent_Identity=28.9699570815451, Blast_Score=148, Evalue=8e-37,
Organism=Escherichia coli, GI1787653, Length=465, Percent_Identity=26.6666666666667, Blast_Score=102, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17534119, Length=469, Percent_Identity=38.8059701492537, Blast_Score=309, Evalue=2e-84,
Organism=Caenorhabditis elegans, GI25143874, Length=480, Percent_Identity=32.7083333333333, Blast_Score=259, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI25143876, Length=480, Percent_Identity=32.7083333333333, Blast_Score=259, Evalue=3e-69,
Organism=Caenorhabditis elegans, GI133930964, Length=483, Percent_Identity=31.6770186335404, Blast_Score=255, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17562198, Length=473, Percent_Identity=32.3467230443975, Blast_Score=254, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI71995606, Length=481, Percent_Identity=33.4719334719335, Blast_Score=247, Evalue=9e-66,
Organism=Caenorhabditis elegans, GI25144435, Length=490, Percent_Identity=31.6326530612245, Blast_Score=243, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17551164, Length=442, Percent_Identity=30.0904977375566, Blast_Score=221, Evalue=9e-58,
Organism=Caenorhabditis elegans, GI32564736, Length=422, Percent_Identity=32.4644549763033, Blast_Score=220, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI71995613, Length=419, Percent_Identity=33.4128878281623, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI115534176, Length=452, Percent_Identity=28.9823008849558, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71986308, Length=438, Percent_Identity=26.2557077625571, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI32566756, Length=339, Percent_Identity=29.4985250737463, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25146391, Length=342, Percent_Identity=30.1169590643275, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25146394, Length=342, Percent_Identity=30.1169590643275, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17564084, Length=336, Percent_Identity=30.3571428571429, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17534447, Length=473, Percent_Identity=24.7357293868922, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI32564151, Length=451, Percent_Identity=24.8337028824834, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI115532534, Length=335, Percent_Identity=25.6716417910448, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71990744, Length=316, Percent_Identity=25.6329113924051, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319478, Length=491, Percent_Identity=36.4562118126273, Blast_Score=325, Evalue=1e-89,
Organism=Saccharomyces cerevisiae, GI6320917, Length=483, Percent_Identity=34.1614906832298, Blast_Score=286, Evalue=6e-78,
Organism=Saccharomyces cerevisiae, GI6324950, Length=480, Percent_Identity=32.7083333333333, Blast_Score=271, Evalue=2e-73,
Organism=Saccharomyces cerevisiae, GI6325196, Length=482, Percent_Identity=33.195020746888, Blast_Score=262, Evalue=9e-71,
Organism=Saccharomyces cerevisiae, GI6323821, Length=490, Percent_Identity=30, Blast_Score=236, Evalue=5e-63,
Organism=Saccharomyces cerevisiae, GI6323822, Length=490, Percent_Identity=29.7959183673469, Blast_Score=235, Evalue=1e-62,
Organism=Saccharomyces cerevisiae, GI6321828, Length=477, Percent_Identity=25.7861635220126, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321826, Length=487, Percent_Identity=25.6673511293634, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6323757, Length=321, Percent_Identity=26.791277258567, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281362580, Length=471, Percent_Identity=39.9150743099788, Blast_Score=346, Evalue=2e-95,
Organism=Drosophila melanogaster, GI62472918, Length=471, Percent_Identity=39.9150743099788, Blast_Score=346, Evalue=2e-95,
Organism=Drosophila melanogaster, GI62472926, Length=471, Percent_Identity=39.9150743099788, Blast_Score=346, Evalue=2e-95,
Organism=Drosophila melanogaster, GI62472936, Length=471, Percent_Identity=39.9150743099788, Blast_Score=346, Evalue=2e-95,
Organism=Drosophila melanogaster, GI21356737, Length=471, Percent_Identity=39.9150743099788, Blast_Score=346, Evalue=2e-95,
Organism=Drosophila melanogaster, GI24650465, Length=472, Percent_Identity=33.8983050847458, Blast_Score=274, Evalue=8e-74,
Organism=Drosophila melanogaster, GI20129399, Length=473, Percent_Identity=33.4038054968288, Blast_Score=265, Evalue=6e-71,
Organism=Drosophila melanogaster, GI24585660, Length=479, Percent_Identity=29.0187891440501, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24666674, Length=464, Percent_Identity=29.0948275862069, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24638878, Length=477, Percent_Identity=27.4633123689727, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24638876, Length=477, Percent_Identity=27.4633123689727, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI281360299, Length=343, Percent_Identity=30.6122448979592, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI281360297, Length=343, Percent_Identity=30.6122448979592, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI281360295, Length=343, Percent_Identity=30.6122448979592, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI24586250, Length=343, Percent_Identity=30.6122448979592, Blast_Score=139, Evalue=5e-33,
Organism=Drosophila melanogaster, GI281360301, Length=343, Percent_Identity=30.6122448979592, Blast_Score=139, Evalue=6e-33,
Organism=Drosophila melanogaster, GI45552499, Length=343, Percent_Identity=30.0291545189504, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI281360303, Length=343, Percent_Identity=30.0291545189504, Blast_Score=135, Evalue=7e-32,
Organism=Drosophila melanogaster, GI24668425, Length=466, Percent_Identity=24.6781115879828, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24668417, Length=466, Percent_Identity=24.6781115879828, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24668413, Length=466, Percent_Identity=24.6781115879828, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI28571802, Length=481, Percent_Identity=24.948024948025, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571800, Length=481, Percent_Identity=24.948024948025, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571798, Length=481, Percent_Identity=24.948024948025, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571796, Length=481, Percent_Identity=24.948024948025, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571794, Length=481, Percent_Identity=24.948024948025, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571806, Length=481, Percent_Identity=24.948024948025, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28574525, Length=506, Percent_Identity=22.3320158102767, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281360293, Length=162, Percent_Identity=30.2469135802469, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51798; Mature: 51667

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRKYPNPSLFINGRSVTGRGAKEEMVIDPSNEEVLGSYRSAAPEDLQELLDSAAAGFE
CCCCCCCCCCEEEECCEECCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
KWRRTSAYERCEILHKVAAALRENAQEIGSLLTLETGKILSESITEVRGAADHFDWSGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCCCC
GRRLYGYTVPARRAESRLRVELEPLGIVFALIPWNFPLGTSARKVAPALAAGCSVILRPP
CCEEEEEECCHHHCCCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEECC
EEAPATVEAFVRCCQEAGLPPGVLNMVLGSPKDVVEPLMASFSVRAVTFTGSTRVGKILI
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCEEEEEEEECCCHHHHHHH
QQAADTVKHLVLELGGHAPAIVLPDADPKKVGVAAARAKFRNAGQVCVSPSRFIVHEKIV
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHH
EPFTQAMVEETRSIKLGSGFDAGAQMGPLTTARQRERVERLVEDARSKGARILAGGQRPS
HHHHHHHHHHHHCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
GFNRGFFFEPTVLGDVPDTALIFEEEPFGPVAPIIPVRSVQEAVEKANAVKWGLAGYLFT
CCCCCEEECCCEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSLADATKVSEAMQVGMVGLNTFAAAAPEAPFGGVKESGYGRECGLEGIREFVSSKLIHT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHC
DIG
CCC
>Mature Secondary Structure 
SGRKYPNPSLFINGRSVTGRGAKEEMVIDPSNEEVLGSYRSAAPEDLQELLDSAAAGFE
CCCCCCCCCEEEECCEECCCCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
KWRRTSAYERCEILHKVAAALRENAQEIGSLLTLETGKILSESITEVRGAADHFDWSGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCCCC
GRRLYGYTVPARRAESRLRVELEPLGIVFALIPWNFPLGTSARKVAPALAAGCSVILRPP
CCEEEEEECCHHHCCCCEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEECC
EEAPATVEAFVRCCQEAGLPPGVLNMVLGSPKDVVEPLMASFSVRAVTFTGSTRVGKILI
CCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCEEEEEEEECCCHHHHHHH
QQAADTVKHLVLELGGHAPAIVLPDADPKKVGVAAARAKFRNAGQVCVSPSRFIVHEKIV
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHH
EPFTQAMVEETRSIKLGSGFDAGAQMGPLTTARQRERVERLVEDARSKGARILAGGQRPS
HHHHHHHHHHHHCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCC
GFNRGFFFEPTVLGDVPDTALIFEEEPFGPVAPIIPVRSVQEAVEKANAVKWGLAGYLFT
CCCCCEEECCCEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSLADATKVSEAMQVGMVGLNTFAAAAPEAPFGGVKESGYGRECGLEGIREFVSSKLIHT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHC
DIG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]