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The map label for this gene is yvrE [H]

Identifier: 110636025

GI number: 110636025

Start: 3993154

End: 3994023

Strand: Reverse

Name: yvrE [H]

Synonym: Meso_3700

Alternate gene names: 110636025

Gene position: 3994023-3993154 (Counterclockwise)

Preceding gene: 110636026

Following gene: 110636024

Centisome position: 90.52

GC content: 56.32

Gene sequence:

>870_bases
ATGGATGTTTTTTTCGAAGCAGGAATGGAAACTGGCGAAGGGCCGATTTGGGACCCGAGAAATGGCACGCTGTATTGCGT
GGATTCTACCAACCCGGCTCTTTGGGCCTTTGTACCCGGATCCAACCAGGTTCGCCGCTACGCGCTTCCACAGCAGGTCG
GGTTCGCGGCGCTTACATATAAGGTCGATACTGTAGTCCTGGGCCTCGAGGACGGCCTATATGCCTACGATCTGAACCGT
CGGGAACTACGGTTGATCATCGATCCCGAACCCGGCATCGCCGGCAACCGCATCAATGACGGCACCGTCGACATCGATGG
CGGCCTTATCTTCGGTACTTTGGACCTCGGCTTAAGGAATCCGACCGGGTCAGCATACAAGTTGTTCCCGGACGGGCGCC
TCCTGAAATTCGACGAAGGCTATATTGTCTTCAACGGACCGTTCGCCGATCCCGCCAACCCGCGCATCTTTACAGTCAAT
TCCGAAGTGCACGAAGTGTACGTATTCGACCGCGAGGCCGACGGTTCCTTCACAAACAAGCGGTTGTTCACGGAATGGCC
GAGAGAATGGGGCATCCCCGATGGTCTCGTCATGGATTCAGCCGGCAATGTCTGGATCGCTCACTGGGATGGCAGTAGAA
TCACGCGTTTCTCGCCAAGCGGTCGATATGAAGCCCATATTGAGCTACCCGTGGGCCGGGTGACAAAAATCGCATTCGGC
GGTGAGGATCTCCGAACCATTTATGCAACCACCGCGAATAGAGGCGTGGAACGCAGGTTACAGCCCCTCGCTGGGAGTGT
ATTCCGGCTTGAACAAGATTATCGCGGGCTTGGGCCTCGGTTTGTCGCCGACACTTTGCTGGCACTCTGA

Upstream 100 bases:

>100_bases
TTGTCTCTGATGTCTGCGCATTGCACGCCTGGAAGACTGCCTTCGACCGCTCCATGTCGGCCGAAGGCGTGAAGTTCGTT
TTTGATCCCCGGCTGTAGGA

Downstream 100 bases:

>100_bases
TCATTTTTGCGTGATGGGCGACGCTCTCCGATGCATCGGCTGACGGAGTGGAAAATCTGGATCACTCAGCCTCGATCCTG
AGCTCCAGCATAATCAGTAG

Product: SMP-30/gluconolaconase/LRE-like region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MDVFFEAGMETGEGPIWDPRNGTLYCVDSTNPALWAFVPGSNQVRRYALPQQVGFAALTYKVDTVVLGLEDGLYAYDLNR
RELRLIIDPEPGIAGNRINDGTVDIDGGLIFGTLDLGLRNPTGSAYKLFPDGRLLKFDEGYIVFNGPFADPANPRIFTVN
SEVHEVYVFDREADGSFTNKRLFTEWPREWGIPDGLVMDSAGNVWIAHWDGSRITRFSPSGRYEAHIELPVGRVTKIAFG
GEDLRTIYATTANRGVERRLQPLAGSVFRLEQDYRGLGPRFVADTLLAL

Sequences:

>Translated_289_residues
MDVFFEAGMETGEGPIWDPRNGTLYCVDSTNPALWAFVPGSNQVRRYALPQQVGFAALTYKVDTVVLGLEDGLYAYDLNR
RELRLIIDPEPGIAGNRINDGTVDIDGGLIFGTLDLGLRNPTGSAYKLFPDGRLLKFDEGYIVFNGPFADPANPRIFTVN
SEVHEVYVFDREADGSFTNKRLFTEWPREWGIPDGLVMDSAGNVWIAHWDGSRITRFSPSGRYEAHIELPVGRVTKIAFG
GEDLRTIYATTANRGVERRLQPLAGSVFRLEQDYRGLGPRFVADTLLAL
>Mature_289_residues
MDVFFEAGMETGEGPIWDPRNGTLYCVDSTNPALWAFVPGSNQVRRYALPQQVGFAALTYKVDTVVLGLEDGLYAYDLNR
RELRLIIDPEPGIAGNRINDGTVDIDGGLIFGTLDLGLRNPTGSAYKLFPDGRLLKFDEGYIVFNGPFADPANPRIFTVN
SEVHEVYVFDREADGSFTNKRLFTEWPREWGIPDGLVMDSAGNVWIAHWDGSRITRFSPSGRYEAHIELPVGRVTKIAFG
GEDLRTIYATTANRGVERRLQPLAGSVFRLEQDYRGLGPRFVADTLLAL

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=301, Percent_Identity=26.578073089701, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI4759036, Length=301, Percent_Identity=26.578073089701, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24646912, Length=261, Percent_Identity=26.4367816091954, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24646910, Length=261, Percent_Identity=26.4367816091954, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI45551448, Length=268, Percent_Identity=26.865671641791, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641471, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI18860103, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24641469, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32185; Mature: 32185

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVFFEAGMETGEGPIWDPRNGTLYCVDSTNPALWAFVPGSNQVRRYALPQQVGFAALTY
CCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEEE
KVDTVVLGLEDGLYAYDLNRRELRLIIDPEPGIAGNRINDGTVDIDGGLIFGTLDLGLRN
EEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEEECCCC
PTGSAYKLFPDGRLLKFDEGYIVFNGPFADPANPRIFTVNSEVHEVYVFDREADGSFTNK
CCCCEEEECCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCC
RLFTEWPREWGIPDGLVMDSAGNVWIAHWDGSRITRFSPSGRYEAHIELPVGRVTKIAFG
CCEECCCHHHCCCCCEEEECCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCEEEEEEC
GEDLRTIYATTANRGVERRLQPLAGSVFRLEQDYRGLGPRFVADTLLAL
CCCEEEEEEECCCCCHHHHHHHHCCCEEEEEHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDVFFEAGMETGEGPIWDPRNGTLYCVDSTNPALWAFVPGSNQVRRYALPQQVGFAALTY
CCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCEEEEEE
KVDTVVLGLEDGLYAYDLNRRELRLIIDPEPGIAGNRINDGTVDIDGGLIFGTLDLGLRN
EEEEEEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCEEEEEEEECCCC
PTGSAYKLFPDGRLLKFDEGYIVFNGPFADPANPRIFTVNSEVHEVYVFDREADGSFTNK
CCCCEEEECCCCEEEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCC
RLFTEWPREWGIPDGLVMDSAGNVWIAHWDGSRITRFSPSGRYEAHIELPVGRVTKIAFG
CCEECCCHHHCCCCCEEEECCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCEEEEEEC
GEDLRTIYATTANRGVERRLQPLAGSVFRLEQDYRGLGPRFVADTLLAL
CCCEEEEEEECCCCCHHHHHHHHCCCEEEEEHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]