| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633051
Identifier: 110633051
GI number: 110633051
Start: 771350
End: 772483
Strand: Direct
Name: 110633051
Synonym: Meso_0694
Alternate gene names: NA
Gene position: 771350-772483 (Clockwise)
Preceding gene: 110633049
Following gene: 110633052
Centisome position: 17.48
GC content: 61.38
Gene sequence:
>1134_bases ATGGCGCCGGGGCAGAAACGCTCTCGTTTTCCTTCCATTGCATTGGGCATCGGCTTTTTGCTCGGCTTCCCAACGGTCGG CGCCTATCAGGACATGGTGAGCCTGGTTGCTGGACAGGATATTCAAGCGCGTTGGACGGCGGTGGTGGAGCGTTCCGTCG CTGGGTCCGTCCACAAAGCCGAGATGCCGTTCCTGAACCCGGATGCACCGGCCGCGGCTGTTTCGGGCGCAGGGCGCCTC ACGCCCGGCATTGGCGAGGTCGCATTTCGCACAGGCGGCAAGGCGGCTGAGGGATCGGACGAGAAGAATATCAATCGTCA GGCCAAGCATGGGCGTTTGGTGAAAACCTTGCCCATGGCCCCTCCACGCCTTTTCAATGCGGGCACGATTTTCGAGCAGA CGAGCCTGCTCAAGGCTGAGCCGCTCGGCGAAACCCTGATGGCTTTTGTCGATCCCGACATCAAGGGCAAGGAGGTTCAA ATCGCCTCCGCCTTCTATATCAAGAAGAAGCAGGACCTTGGCCTTCTCCCCGCCATAGCCGAACTCGTCAACAACGAGGA GGGCGATATCCTTCCAAGCGCCTATGCGCCGGCAGAGCCGGATTATGCGCGGGCATCACCCTTCGCCAGCATCTTGCGGG ACGAGAACGCGGGCCGCTTCATCCCGCCTGTCCCGCAAAGCGATCACCCTTGGGCGCGGACGCCCCTGCCGCCGGATGTC TTTTCGGAGCGGGAGCAGCAGTGCCTGACGGCCGGCGTTTATTTCGAGGCGCGTGGCGAGCCGGTGCGCGGCCAGGCGGC CGTGGCCCAGGTCATTTTGAACCGCGTGCGCAATCCCACCTATCCGAACAGCATCTGCGGCGTCGTTTATCAGAACGAGA AATGGCGCAACCGCTGCCAGTTTTCCTTCGCCTGCGATGGCATAAAGGACCGGGTTGCAAGCCCGAAGCACTGGCAGATG GCCAAGGACGTGGCATTGGCGGTTACTGCTGGCAGGATTTGGCTTGAAGAGGTTGGCACTGCCACCCATTATCACGCCAC CTATGTGCACCCGCGCTGGGCCAATTTCATGGAGCGCACGAAGAAGATCGGGCAGCACATTTTCTACCGGACCTATGGCG GCGGCTGGGATTGA
Upstream 100 bases:
>100_bases CGCGTTAACCGGTGATCAAGGTTAACGAAATAGTCTCGGATTAATCGGCGTTTTAGTTTCGAGAGGGGTCCGAGTGTTTG CGTCAGGTGTAGGGCGGCGT
Downstream 100 bases:
>100_bases AAGGCCTCATGGCTGCCCATTCCGGGCGCCGAAATCCGTGATTCCGCCGCCCGACAGGCTCCTGATCGGCAAGACGCTTT GTCGCACCGCATTAATTCAT
Product: cell wall hydrolase, SleB
Products: NA
Alternate protein names: Cell Wall Hydrolase Family; SleB-Like Protein; Hydrolase; Cell Wall Hydrolase; Spore Cortex-Lytic; Cell Wall Hydrolase Domain Protein; Spore-Cortex-Lytic Prepeptide; Cell Wall Hydrolase Sleb; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase Domain-Containing Protein; Cell Wall Hydrolase Family Protein
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MAPGQKRSRFPSIALGIGFLLGFPTVGAYQDMVSLVAGQDIQARWTAVVERSVAGSVHKAEMPFLNPDAPAAAVSGAGRL TPGIGEVAFRTGGKAAEGSDEKNINRQAKHGRLVKTLPMAPPRLFNAGTIFEQTSLLKAEPLGETLMAFVDPDIKGKEVQ IASAFYIKKKQDLGLLPAIAELVNNEEGDILPSAYAPAEPDYARASPFASILRDENAGRFIPPVPQSDHPWARTPLPPDV FSEREQQCLTAGVYFEARGEPVRGQAAVAQVILNRVRNPTYPNSICGVVYQNEKWRNRCQFSFACDGIKDRVASPKHWQM AKDVALAVTAGRIWLEEVGTATHYHATYVHPRWANFMERTKKIGQHIFYRTYGGGWD
Sequences:
>Translated_377_residues MAPGQKRSRFPSIALGIGFLLGFPTVGAYQDMVSLVAGQDIQARWTAVVERSVAGSVHKAEMPFLNPDAPAAAVSGAGRL TPGIGEVAFRTGGKAAEGSDEKNINRQAKHGRLVKTLPMAPPRLFNAGTIFEQTSLLKAEPLGETLMAFVDPDIKGKEVQ IASAFYIKKKQDLGLLPAIAELVNNEEGDILPSAYAPAEPDYARASPFASILRDENAGRFIPPVPQSDHPWARTPLPPDV FSEREQQCLTAGVYFEARGEPVRGQAAVAQVILNRVRNPTYPNSICGVVYQNEKWRNRCQFSFACDGIKDRVASPKHWQM AKDVALAVTAGRIWLEEVGTATHYHATYVHPRWANFMERTKKIGQHIFYRTYGGGWD >Mature_376_residues APGQKRSRFPSIALGIGFLLGFPTVGAYQDMVSLVAGQDIQARWTAVVERSVAGSVHKAEMPFLNPDAPAAAVSGAGRLT PGIGEVAFRTGGKAAEGSDEKNINRQAKHGRLVKTLPMAPPRLFNAGTIFEQTSLLKAEPLGETLMAFVDPDIKGKEVQI ASAFYIKKKQDLGLLPAIAELVNNEEGDILPSAYAPAEPDYARASPFASILRDENAGRFIPPVPQSDHPWARTPLPPDVF SEREQQCLTAGVYFEARGEPVRGQAAVAQVILNRVRNPTYPNSICGVVYQNEKWRNRCQFSFACDGIKDRVASPKHWQMA KDVALAVTAGRIWLEEVGTATHYHATYVHPRWANFMERTKKIGQHIFYRTYGGGWD
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41326; Mature: 41195
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPGQKRSRFPSIALGIGFLLGFPTVGAYQDMVSLVAGQDIQARWTAVVERSVAGSVHKA CCCCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHC EMPFLNPDAPAAAVSGAGRLTPGIGEVAFRTGGKAAEGSDEKNINRQAKHGRLVKTLPMA CCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCHHHHCCCEEEECCCC PPRLFNAGTIFEQTSLLKAEPLGETLMAFVDPDIKGKEVQIASAFYIKKKQDLGLLPAIA CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEHEEEEECCCCCCHHHHHH ELVNNEEGDILPSAYAPAEPDYARASPFASILRDENAGRFIPPVPQSDHPWARTPLPPDV HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH FSEREQQCLTAGVYFEARGEPVRGQAAVAQVILNRVRNPTYPNSICGVVYQNEKWRNRCQ HHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCC FSFACDGIKDRVASPKHWQMAKDVALAVTAGRIWLEEVGTATHYHATYVHPRWANFMERT EEEECCCHHHHCCCCHHHHHHHHHHEEEHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHH KKIGQHIFYRTYGGGWD HHHHHHEEEEECCCCCC >Mature Secondary Structure APGQKRSRFPSIALGIGFLLGFPTVGAYQDMVSLVAGQDIQARWTAVVERSVAGSVHKA CCCCCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHC EMPFLNPDAPAAAVSGAGRLTPGIGEVAFRTGGKAAEGSDEKNINRQAKHGRLVKTLPMA CCCCCCCCCCHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCHHHHCCCEEEECCCC PPRLFNAGTIFEQTSLLKAEPLGETLMAFVDPDIKGKEVQIASAFYIKKKQDLGLLPAIA CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEHEEEEECCCCCCHHHHHH ELVNNEEGDILPSAYAPAEPDYARASPFASILRDENAGRFIPPVPQSDHPWARTPLPPDV HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH FSEREQQCLTAGVYFEARGEPVRGQAAVAQVILNRVRNPTYPNSICGVVYQNEKWRNRCQ HHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCC FSFACDGIKDRVASPKHWQMAKDVALAVTAGRIWLEEVGTATHYHATYVHPRWANFMERT EEEECCCHHHHCCCCHHHHHHHHHHEEEHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHH KKIGQHIFYRTYGGGWD HHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA