Definition | Mesorhizobium sp. BNC1, complete genome. |
---|---|
Accession | NC_008254 |
Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is katG
Identifier: 110632983
GI number: 110632983
Start: 703539
End: 705719
Strand: Direct
Name: katG
Synonym: Meso_0626
Alternate gene names: 110632983
Gene position: 703539-705719 (Clockwise)
Preceding gene: 110632982
Following gene: 110633005
Centisome position: 15.94
GC content: 63.14
Gene sequence:
>2181_bases ATGGACGCAAAAACTGACGATAGCGCGGGCAAATGTCCGTTTACCGGCGGCGGCCGCCGTGGACACAGGAATCGCGACTG GTGGCCGGAGCAGTTGGACCTTGACGTCCTGCATCGGAATTCCACCTTGTCCGACCCGATGGGCGAGGATTTCGATTATG CGGAGGAGTTCAAGAGCCTCGACCTGAATGCCGTCATCCAGGATCTGCATGCCCTGATGACCGATTCGCAGGATTGGTGG CCGGCCGATTTCGGTCACTATGGCGGACTGATGATCCGCATGGCCTGGCACAGCGCGGGTACCTACCGCATAACCGACGG CCGCGGCGGTGCAGGCGCCGGTCAGCAGCGTTTCGCGCCGCTCAACAGCTGGCCCGACAACGCGAACCTCGACAAGGCGC GTCGGATGCTCTGGCCGATCAAGCAGAAATATGGGCGCAAGATCTCCTGGGCCGACCTGATGATTCTCGCCGGCAATGTC GCGCTTGAATCGATGGGCTTCAAAACCTTCGGCTTCGCCGGCGGGCGCAAGGATGTCTGGGAGCCTGAAGAGCTCTTCTG GGGACCTGAAGGAACATGGCTGGGCGACGAGCGCTATAGCGGCGAACGTCAGCTCTCCGAACCGCTGGCCGCGGTGCAGA TGGGCCTGATCTACGTCAATCCGGAAGGACCGAACGGCAATCCGGACCCGGTGGCGGCGGCGAAGGACATCCGTGAAACC TTCTACCGCATGGCGATGAACGACGAGGAGACGGTTGCGCTGATCGCCGGCGGCCACACTTTCGGCAAGACGCACGGCGC CGGCGATCCCTCGCTGATCGGCCCGGACCCGGAAGGGGCGGCCATTGAGGACCAGGGCCTTGGCTGGAAAAGCGGCCATG GCACGGGCTTTGGAGCCGATACCATCACAGGCGGCCCGGAGGTCACCTGGTCGCAGACGCCGACGAGATGGAGCAACTAT TTCTTCGAGAACCTCTTCGGCTATGAATGGGAACTGACGAAGAGTCCCGCCGGCGCCTGGCAGTGGAAGGCAAAGAACGC CGAAGCCACGGTTCCCGATGCCCATGACCCGTCCAAGAAGCACGTGCCGACCATGCTCACGACGGACCTCTCGCTGCGCT TCGATCCCATTTACGAGAAGATCTCGCGGCGCTTCCTTGAGAATCCGGACCAGTTCGCCGATGCATTCGCGCGCGCCTGG TTCAAGCTGACCCACCGCGATATGGGTCCGAAAGTGCGCTACCTCGGCCCCCTCGTGCCGAAGGAAACCTTGATCTGGCA GGATCCGATCCCCGAGGTCGATCATGTGTTGGTGGACGACCAGGACATTGCCGGACTGAAGGCGAAGATCCTTGCTTCGG GCCTCTCCGTATCCGAGCTGGTCTCGACGGCCTGGGCTTCGGCATCGACCTTCCGCGGCTCCGACAAGCGGGGCGGCGCC AATGGTGCGCGCATTCGTCTGGCCCCGCAGAAGGACTGGGAGGTCAACGACCCGGCCCAGCTCGCCAAGGTTCTCCAGAG ACTTGAAGCGATCCAAGGCGAGTTCAACGCGGCTCAGGCCGGCGGCAAGAAGATCTCGCTTGCCGACCTGATCGTTCTCG GCGGCTGCGCTGCGGTCGAGAAGGCCGCCAGGGATGCGGGCGTCGATGTGAAGGTGCCTTTCACTCCGGGCCGTATGGAC GCCTCTCAGGAGCAGACGGACATCGATTCCTTCCGCGCTCTTGAGCCGCGTGCCGACGGCTTCCGCAATTATCTGAGTGG CAGGCAGTTCATGATGCCCGAGGAAGCCCTGGTGGATCGGGCGCAGCTACTGAGGCTGACGGCGCCGGAGATGACGGTTC TGCTCGGCGGCCTGCGCGTTCTCGGTGCGAATTCCGGCGGCTCCGAACACGGCGTCCTCACCAAGCAGGTTGGCAAGCTG ACAAACGACTTCTTTGTCAACCTGCTCACCATGAACACGCAGTGGCAGCCGATCGCCGACGGCACCTATGAGGGCCGCGA CCGGAAGACCAACGAATTGAAGTGGCGGGCCACGCGCGTCGACCTGATCTTCGGCGCGCATTCGCAACTGCGGGCGCTGG CGGAGGTCTATGCGTGCGGCGACAGCCAGGAGAAGTTCGTTCAGGATTTCGTCGCTGCGTGGACGAAGGTCATGAACGCC GACCGTTTCGACCTGGCCTGA
Upstream 100 bases:
>100_bases GAAAATAGGAATTTCGATTAGCGATTATCAGCTGAGTTCTCTAATCTAGCCTAGTCTGGAATAGTTCTAGGGTGGCGAGT GGCCGCTGATGGAGAGCAAC
Downstream 100 bases:
>100_bases TCTAAACAGGCCGTCGAATAGGTCTAGAAGCGACTGCAACGAGCGCGGAGCGATCCGCGCTCGTTTGCTTTGCGCCGCCG CTTGGTGGCGCCTCGCTCAA
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MDAKTDDSAGKCPFTGGGRRGHRNRDWWPEQLDLDVLHRNSTLSDPMGEDFDYAEEFKSLDLNAVIQDLHALMTDSQDWW PADFGHYGGLMIRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRMLWPIKQKYGRKISWADLMILAGNV ALESMGFKTFGFAGGRKDVWEPEELFWGPEGTWLGDERYSGERQLSEPLAAVQMGLIYVNPEGPNGNPDPVAAAKDIRET FYRMAMNDEETVALIAGGHTFGKTHGAGDPSLIGPDPEGAAIEDQGLGWKSGHGTGFGADTITGGPEVTWSQTPTRWSNY FFENLFGYEWELTKSPAGAWQWKAKNAEATVPDAHDPSKKHVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPKVRYLGPLVPKETLIWQDPIPEVDHVLVDDQDIAGLKAKILASGLSVSELVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEVNDPAQLAKVLQRLEAIQGEFNAAQAGGKKISLADLIVLGGCAAVEKAARDAGVDVKVPFTPGRMD ASQEQTDIDSFRALEPRADGFRNYLSGRQFMMPEEALVDRAQLLRLTAPEMTVLLGGLRVLGANSGGSEHGVLTKQVGKL TNDFFVNLLTMNTQWQPIADGTYEGRDRKTNELKWRATRVDLIFGAHSQLRALAEVYACGDSQEKFVQDFVAAWTKVMNA DRFDLA
Sequences:
>Translated_726_residues MDAKTDDSAGKCPFTGGGRRGHRNRDWWPEQLDLDVLHRNSTLSDPMGEDFDYAEEFKSLDLNAVIQDLHALMTDSQDWW PADFGHYGGLMIRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRMLWPIKQKYGRKISWADLMILAGNV ALESMGFKTFGFAGGRKDVWEPEELFWGPEGTWLGDERYSGERQLSEPLAAVQMGLIYVNPEGPNGNPDPVAAAKDIRET FYRMAMNDEETVALIAGGHTFGKTHGAGDPSLIGPDPEGAAIEDQGLGWKSGHGTGFGADTITGGPEVTWSQTPTRWSNY FFENLFGYEWELTKSPAGAWQWKAKNAEATVPDAHDPSKKHVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPKVRYLGPLVPKETLIWQDPIPEVDHVLVDDQDIAGLKAKILASGLSVSELVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEVNDPAQLAKVLQRLEAIQGEFNAAQAGGKKISLADLIVLGGCAAVEKAARDAGVDVKVPFTPGRMD ASQEQTDIDSFRALEPRADGFRNYLSGRQFMMPEEALVDRAQLLRLTAPEMTVLLGGLRVLGANSGGSEHGVLTKQVGKL TNDFFVNLLTMNTQWQPIADGTYEGRDRKTNELKWRATRVDLIFGAHSQLRALAEVYACGDSQEKFVQDFVAAWTKVMNA DRFDLA >Mature_726_residues MDAKTDDSAGKCPFTGGGRRGHRNRDWWPEQLDLDVLHRNSTLSDPMGEDFDYAEEFKSLDLNAVIQDLHALMTDSQDWW PADFGHYGGLMIRMAWHSAGTYRITDGRGGAGAGQQRFAPLNSWPDNANLDKARRMLWPIKQKYGRKISWADLMILAGNV ALESMGFKTFGFAGGRKDVWEPEELFWGPEGTWLGDERYSGERQLSEPLAAVQMGLIYVNPEGPNGNPDPVAAAKDIRET FYRMAMNDEETVALIAGGHTFGKTHGAGDPSLIGPDPEGAAIEDQGLGWKSGHGTGFGADTITGGPEVTWSQTPTRWSNY FFENLFGYEWELTKSPAGAWQWKAKNAEATVPDAHDPSKKHVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAW FKLTHRDMGPKVRYLGPLVPKETLIWQDPIPEVDHVLVDDQDIAGLKAKILASGLSVSELVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEVNDPAQLAKVLQRLEAIQGEFNAAQAGGKKISLADLIVLGGCAAVEKAARDAGVDVKVPFTPGRMD ASQEQTDIDSFRALEPRADGFRNYLSGRQFMMPEEALVDRAQLLRLTAPEMTVLLGGLRVLGANSGGSEHGVLTKQVGKL TNDFFVNLLTMNTQWQPIADGTYEGRDRKTNELKWRATRVDLIFGAHSQLRALAEVYACGDSQEKFVQDFVAAWTKVMNA DRFDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=732, Percent_Identity=62.7049180327869, Blast_Score=879, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_MESSB (Q11KP9)
Other databases:
- EMBL: CP000390 - RefSeq: YP_673191.1 - ProteinModelPortal: Q11KP9 - SMR: Q11KP9 - STRING: Q11KP9 - GeneID: 4182409 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_0626 - NMPDR: fig|266779.1.peg.2762 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: FEWELTK - PhylomeDB: Q11KP9 - ProtClustDB: PRK15061 - BioCyc: MSP266779:MESO_0626-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 80229; Mature: 80229
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 97-97
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAKTDDSAGKCPFTGGGRRGHRNRDWWPEQLDLDVLHRNSTLSDPMGEDFDYAEEFKSL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCHHHHHHCC DLNAVIQDLHALMTDSQDWWPADFGHYGGLMIRMAWHSAGTYRITDGRGGAGAGQQRFAP CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCC LNSWPDNANLDKARRMLWPIKQKYGRKISWADLMILAGNVALESMGFKTFGFAGGRKDVW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHCCCCEEECCCCCCCCC EPEELFWGPEGTWLGDERYSGERQLSEPLAAVQMGLIYVNPEGPNGNPDPVAAAKDIRET CHHHHEECCCCCCCCCHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHH FYRMAMNDEETVALIAGGHTFGKTHGAGDPSLIGPDPEGAAIEDQGLGWKSGHGTGFGAD HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC TITGGPEVTWSQTPTRWSNYFFENLFGYEWELTKSPAGAWQWKAKNAEATVPDAHDPSKK CCCCCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC HVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAWFKLTHRDMGPKVRYLGPLVP CCCEEEEECCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC KETLIWQDPIPEVDHVLVDDQDIAGLKAKILASGLSVSELVSTAWASASTFRGSDKRGGA CCCEEECCCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCCCC NGARIRLAPQKDWEVNDPAQLAKVLQRLEAIQGEFNAAQAGGKKISLADLIVLGGCAAVE CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEHHHHHHHCCHHHHH KAARDAGVDVKVPFTPGRMDASQEQTDIDSFRALEPRADGFRNYLSGRQFMMPEEALVDR HHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHH AQLLRLTAPEMTVLLGGLRVLGANSGGSEHGVLTKQVGKLTNDFFVNLLTMNTQWQPIAD HHHHHHCCCHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCC GTYEGRDRKTNELKWRATRVDLIFGAHSQLRALAEVYACGDSQEKFVQDFVAAWTKVMNA CCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC DRFDLA CCCCCC >Mature Secondary Structure MDAKTDDSAGKCPFTGGGRRGHRNRDWWPEQLDLDVLHRNSTLSDPMGEDFDYAEEFKSL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCHHHHHHCC DLNAVIQDLHALMTDSQDWWPADFGHYGGLMIRMAWHSAGTYRITDGRGGAGAGQQRFAP CHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCC LNSWPDNANLDKARRMLWPIKQKYGRKISWADLMILAGNVALESMGFKTFGFAGGRKDVW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHCCCCEEECCCCCCCCC EPEELFWGPEGTWLGDERYSGERQLSEPLAAVQMGLIYVNPEGPNGNPDPVAAAKDIRET CHHHHEECCCCCCCCCHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHH FYRMAMNDEETVALIAGGHTFGKTHGAGDPSLIGPDPEGAAIEDQGLGWKSGHGTGFGAD HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC TITGGPEVTWSQTPTRWSNYFFENLFGYEWELTKSPAGAWQWKAKNAEATVPDAHDPSKK CCCCCCCEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC HVPTMLTTDLSLRFDPIYEKISRRFLENPDQFADAFARAWFKLTHRDMGPKVRYLGPLVP CCCEEEEECCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC KETLIWQDPIPEVDHVLVDDQDIAGLKAKILASGLSVSELVSTAWASASTFRGSDKRGGA CCCEEECCCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCCCCCC NGARIRLAPQKDWEVNDPAQLAKVLQRLEAIQGEFNAAQAGGKKISLADLIVLGGCAAVE CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEHHHHHHHCCHHHHH KAARDAGVDVKVPFTPGRMDASQEQTDIDSFRALEPRADGFRNYLSGRQFMMPEEALVDR HHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHH AQLLRLTAPEMTVLLGGLRVLGANSGGSEHGVLTKQVGKLTNDFFVNLLTMNTQWQPIAD HHHHHHCCCHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCC GTYEGRDRKTNELKWRATRVDLIFGAHSQLRALAEVYACGDSQEKFVQDFVAAWTKVMNA CCCCCCCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC DRFDLA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA