Definition | Mesorhizobium sp. BNC1, complete genome. |
---|---|
Accession | NC_008254 |
Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110632968
Identifier: 110632968
GI number: 110632968
Start: 685263
End: 686546
Strand: Direct
Name: 110632968
Synonym: Meso_0611
Alternate gene names: NA
Gene position: 685263-686546 (Clockwise)
Preceding gene: 110632963
Following gene: 110632977
Centisome position: 15.53
GC content: 60.75
Gene sequence:
>1284_bases ATGACTTCCTGCTCGCGATCCCCATCGAACCTGTTCCGCTTCTTCCGCTCTCTGGCGAAAGACCAGGGCGGTTCGGTAGC GGTTATTGCCGCCATCGTCTTTCCCGTCGTTGTCGGTGCGATGGGTCTGGGCGTCGAGAGCGGCTATTGGTATCTCAAGC AGCGCAAGCTGCAGCATGCGGCTGACGTTGCCGTCTACGCCGCCTCTGTTCGCTATCGTGCGGGCGACGCCCGTGCGCTG ATGGAAACGGCGGCTCTCAGATCCGCTCGCGTGACCGGCTACCAGCCTTCCATTGGAACCATTACGACAGGAGTCCAGGC CGGCTCGACGGCCGGAAGCGGTACGGTTTCGGTAGAACTGACGGAAACGCATTCGCGCCTCTTCTCGTCTGTTTTTACCA CCGATCCGGTTGTCCTCAGTGCCCGCGCGGTGGCTGAGCTCAAGGGCGGCTCCAGAGCTTGCGTCCTTGCGCTGTCGCCC ACCGCGCCGGGCGCCGTCACCGTGACAGGCTCGACCGACGTGCAGCTTAACGGCTGCAGTGTCGTGTCAAACTCCAACGC GTCCGACGCATTTTTGATGAGGAACGGCAGTGCTCTTATGTCGACGGACTGCGTCTATACCGTCGGCGGCGCGATCACGA CGACGGGTCTGAACCTGACCGGGTGCAGCAAGCCGGTGGTCTCTTCTCCACCTGTTCCCGACCCTTTTGCCGGTGTCCCC GAGCCAGACAAGGTGCAGATCCAGCAGCTACCCTGCCGGACGCTTTCTCACGTTTCGACCACCGACTACGCATTCGATAC CTTGGCCAACGGGCAGAAGGCCATCCGCTTCTGCGGCGGGCTCGACATCAAAGGTAACATTACGCTCAAATCTGGGCTCT ATATCATCGACGGCGGCAAATTCACGATAACGGCGGGGGCAGCGCTTGTCGGCAGTGGCGTGACATTCCTGCTCACCGGC GCCACCACGGTGGACTTGATGGGTAACGCGAAAATCGACCTTTCGGCCCCGACTTCCGGACCATATGCCGGAGTTCTGAT GTTCGGAAGCCGCAGCGGGCCGGAAGCCAATCATACGATCACCGGCAATTCGGACTGGCGTCTTCAGGGCACGATCTACA TGCCGAAGGGAATCCTCGATTTCACGGGTAACTCGACCGTGACCGGCGCCTGCACGCAGATCGTTGCGGACCGGATTAAC TTCACCGGAAATTCGGCGATGGAAACCTGCGCCGACAAGACAAACGAGATCTTGGTCGGCCGCACGATCGCTATCATCGA GTAG
Upstream 100 bases:
>100_bases CTACCGCCCTGGGCTGCGGGGACTAGGCTATGTGGCTGAATCGAGAGGAACTGCCGGAAGGGCTATATCCGTCGCGCTCC ACCTTTCCCGGAAAAGAAAA
Downstream 100 bases:
>100_bases AAGGCGGGAGCGGACCGCTCCTGCCGCTTTCCGGCGGAACGTGTTACGATTTGTTCAGCAGGGCCAAGTTGGCCTGCACC ACTGGGTCTCCAGGCAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTSCSRSPSNLFRFFRSLAKDQGGSVAVIAAIVFPVVVGAMGLGVESGYWYLKQRKLQHAADVAVYAASVRYRAGDARAL METAALRSARVTGYQPSIGTITTGVQAGSTAGSGTVSVELTETHSRLFSSVFTTDPVVLSARAVAELKGGSRACVLALSP TAPGAVTVTGSTDVQLNGCSVVSNSNASDAFLMRNGSALMSTDCVYTVGGAITTTGLNLTGCSKPVVSSPPVPDPFAGVP EPDKVQIQQLPCRTLSHVSTTDYAFDTLANGQKAIRFCGGLDIKGNITLKSGLYIIDGGKFTITAGAALVGSGVTFLLTG ATTVDLMGNAKIDLSAPTSGPYAGVLMFGSRSGPEANHTITGNSDWRLQGTIYMPKGILDFTGNSTVTGACTQIVADRIN FTGNSAMETCADKTNEILVGRTIAIIE
Sequences:
>Translated_427_residues MTSCSRSPSNLFRFFRSLAKDQGGSVAVIAAIVFPVVVGAMGLGVESGYWYLKQRKLQHAADVAVYAASVRYRAGDARAL METAALRSARVTGYQPSIGTITTGVQAGSTAGSGTVSVELTETHSRLFSSVFTTDPVVLSARAVAELKGGSRACVLALSP TAPGAVTVTGSTDVQLNGCSVVSNSNASDAFLMRNGSALMSTDCVYTVGGAITTTGLNLTGCSKPVVSSPPVPDPFAGVP EPDKVQIQQLPCRTLSHVSTTDYAFDTLANGQKAIRFCGGLDIKGNITLKSGLYIIDGGKFTITAGAALVGSGVTFLLTG ATTVDLMGNAKIDLSAPTSGPYAGVLMFGSRSGPEANHTITGNSDWRLQGTIYMPKGILDFTGNSTVTGACTQIVADRIN FTGNSAMETCADKTNEILVGRTIAIIE >Mature_426_residues TSCSRSPSNLFRFFRSLAKDQGGSVAVIAAIVFPVVVGAMGLGVESGYWYLKQRKLQHAADVAVYAASVRYRAGDARALM ETAALRSARVTGYQPSIGTITTGVQAGSTAGSGTVSVELTETHSRLFSSVFTTDPVVLSARAVAELKGGSRACVLALSPT APGAVTVTGSTDVQLNGCSVVSNSNASDAFLMRNGSALMSTDCVYTVGGAITTTGLNLTGCSKPVVSSPPVPDPFAGVPE PDKVQIQQLPCRTLSHVSTTDYAFDTLANGQKAIRFCGGLDIKGNITLKSGLYIIDGGKFTITAGAALVGSGVTFLLTGA TTVDLMGNAKIDLSAPTSGPYAGVLMFGSRSGPEANHTITGNSDWRLQGTIYMPKGILDFTGNSTVTGACTQIVADRINF TGNSAMETCADKTNEILVGRTIAIIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44071; Mature: 43939
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSCSRSPSNLFRFFRSLAKDQGGSVAVIAAIVFPVVVGAMGLGVESGYWYLKQRKLQHA CCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH ADVAVYAASVRYRAGDARALMETAALRSARVTGYQPSIGTITTGVQAGSTAGSGTVSVEL HHEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEEEE TETHSRLFSSVFTTDPVVLSARAVAELKGGSRACVLALSPTAPGAVTVTGSTDVQLNGCS EHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCEEEECCEE VVSNSNASDAFLMRNGSALMSTDCVYTVGGAITTTGLNLTGCSKPVVSSPPVPDPFAGVP EEECCCCCCEEEEECCCEEEECCEEEEECCEEEECCEEECCCCCCCCCCCCCCCCCCCCC EPDKVQIQQLPCRTLSHVSTTDYAFDTLANGQKAIRFCGGLDIKGNITLKSGLYIIDGGK CCCCEEEEECCCHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCEEEECCEEEEECCE FTITAGAALVGSGVTFLLTGATTVDLMGNAKIDLSAPTSGPYAGVLMFGSRSGPEANHTI EEEEECCEECCCCEEEEEECCEEEEEECCCEEEEECCCCCCEEEEEEEECCCCCCCCCEE TGNSDWRLQGTIYMPKGILDFTGNSTVTGACTQIVADRINFTGNSAMETCADKTNEILVG ECCCCEEEEEEEECCCCEEEECCCCEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEE RTIAIIE EEEEEEC >Mature Secondary Structure TSCSRSPSNLFRFFRSLAKDQGGSVAVIAAIVFPVVVGAMGLGVESGYWYLKQRKLQHA CCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHH ADVAVYAASVRYRAGDARALMETAALRSARVTGYQPSIGTITTGVQAGSTAGSGTVSVEL HHEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCEEEEEE TETHSRLFSSVFTTDPVVLSARAVAELKGGSRACVLALSPTAPGAVTVTGSTDVQLNGCS EHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCEEEECCEE VVSNSNASDAFLMRNGSALMSTDCVYTVGGAITTTGLNLTGCSKPVVSSPPVPDPFAGVP EEECCCCCCEEEEECCCEEEECCEEEEECCEEEECCEEECCCCCCCCCCCCCCCCCCCCC EPDKVQIQQLPCRTLSHVSTTDYAFDTLANGQKAIRFCGGLDIKGNITLKSGLYIIDGGK CCCCEEEEECCCHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCEEEECCEEEEECCE FTITAGAALVGSGVTFLLTGATTVDLMGNAKIDLSAPTSGPYAGVLMFGSRSGPEANHTI EEEEECCEECCCCEEEEEECCEEEEEECCCEEEEECCCCCCEEEEEEEECCCCCCCCCEE TGNSDWRLQGTIYMPKGILDFTGNSTVTGACTQIVADRINFTGNSAMETCADKTNEILVG ECCCCEEEEEEEECCCCEEEECCCCEEHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEE RTIAIIE EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA