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The map label for this gene is mmsR [H]

Identifier: 110632932

GI number: 110632932

Start: 634321

End: 635256

Strand: Direct

Name: mmsR [H]

Synonym: Meso_0574

Alternate gene names: 110632932

Gene position: 634321-635256 (Clockwise)

Preceding gene: 110632930

Following gene: 110632933

Centisome position: 14.38

GC content: 55.45

Gene sequence:

>936_bases
ATGAATGCCGTTGCGCATACGAGTTATTTGCGAAACCTCAGCTCACGGGCGCACGAACAAAGCACCTTTCTTTGGTCAAG
CGGGCAATTTGACGTCGCGCGTCGCGATTACACAGAACTAGTTGAGGGCTCGATCCTTTCTACCTGCCATCTCCTCATGG
TCACCTTGGAAGGCGGTGCCGCTCGCCACTCTTACGTGACCGATTGCGGGTATCGGTACGACGGTATTGACGCGCCAGGA
TCGGTTTCCTTCTTACCCGCGAATTCCCAGCGTCGCCTGAGACTTGAAGCCGTGTCATGGCGCTGGGCCAGCATTGCGAT
CTCGCCTGATCATTTCGAGGACATGACAGGGGGCGTGCATATCGATGCGTTCAGCACCCGCGACGACCGTTTCCTGAGTG
CCCTTCTGGGTCAACTCGCGTGGTACCAAGTTCGGGATGGTCATCTCAATCTCCCATATCTTGACGCGATGCTAACCGCT
CTCATTCACCACCTACGGGTCCGCTATCAGACTGAAAGCAGAGCGGTTACTGAGCGTCTTCGTAGGTTGCCCTCATGGGC
GATCCGCCGCATCACGGACTACATCGTGGCTCAGTTGCCGGGAGAGGTCCGGGTTTCGATGCTGGCCAAACTGACGGGGC
TGTCGGAGGGTCATTTTCATCGCGCCTTCCGCGCGACGACCGGAAAAACGCCTCTGCAGTTCATAAATGAGCTGCGTATC
CAAAGCGCCATTCAAATACTCAACCAGCACCCGATCAATACCGCTGAACTTGCAGTGGCGGTCGGCTTTTCAAGTCCAAC
TTACTTTTCACGTGTTTTCCGTAAGGCCGTCGGCTGCTCCCCCTCGAATTATCCAGTATCAATCAAACGTGTTCGAGAAT
CTGCAGGCACAATTGCGGAAAACATCAGCTCTGTGCGACCCAGGTCAGGATCGTGA

Upstream 100 bases:

>100_bases
TTCTGATTAGGCATCGCTATCACAGCAGCGAGTCTACGAATTAGAATTATGCAAAGGCGATGCCAAGGTCGCCACGTGAG
GGCGTCAAAAGGTAAACACG

Downstream 100 bases:

>100_bases
GCGACCATCCGCAGCAAAAGGTCTACTCCCCAGGCCTGTAAACCAGGTACGGAGAGCATGATGACACGAGTTCACAGGCG
CACAATCCTGCAGGCTGCGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNAVAHTSYLRNLSSRAHEQSTFLWSSGQFDVARRDYTELVEGSILSTCHLLMVTLEGGAARHSYVTDCGYRYDGIDAPG
SVSFLPANSQRRLRLEAVSWRWASIAISPDHFEDMTGGVHIDAFSTRDDRFLSALLGQLAWYQVRDGHLNLPYLDAMLTA
LIHHLRVRYQTESRAVTERLRRLPSWAIRRITDYIVAQLPGEVRVSMLAKLTGLSEGHFHRAFRATTGKTPLQFINELRI
QSAIQILNQHPINTAELAVAVGFSSPTYFSRVFRKAVGCSPSNYPVSIKRVRESAGTIAENISSVRPRSGS

Sequences:

>Translated_311_residues
MNAVAHTSYLRNLSSRAHEQSTFLWSSGQFDVARRDYTELVEGSILSTCHLLMVTLEGGAARHSYVTDCGYRYDGIDAPG
SVSFLPANSQRRLRLEAVSWRWASIAISPDHFEDMTGGVHIDAFSTRDDRFLSALLGQLAWYQVRDGHLNLPYLDAMLTA
LIHHLRVRYQTESRAVTERLRRLPSWAIRRITDYIVAQLPGEVRVSMLAKLTGLSEGHFHRAFRATTGKTPLQFINELRI
QSAIQILNQHPINTAELAVAVGFSSPTYFSRVFRKAVGCSPSNYPVSIKRVRESAGTIAENISSVRPRSGS
>Mature_311_residues
MNAVAHTSYLRNLSSRAHEQSTFLWSSGQFDVARRDYTELVEGSILSTCHLLMVTLEGGAARHSYVTDCGYRYDGIDAPG
SVSFLPANSQRRLRLEAVSWRWASIAISPDHFEDMTGGVHIDAFSTRDDRFLSALLGQLAWYQVRDGHLNLPYLDAMLTA
LIHHLRVRYQTESRAVTERLRRLPSWAIRRITDYIVAQLPGEVRVSMLAKLTGLSEGHFHRAFRATTGKTPLQFINELRI
QSAIQILNQHPINTAELAVAVGFSSPTYFSRVFRKAVGCSPSNYPVSIKRVRESAGTIAENISSVRPRSGS

Specific function: Regulatory protein for the mmsAB operon. Activates the transcription of the mmsAB genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34835; Mature: 34835

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVAHTSYLRNLSSRAHEQSTFLWSSGQFDVARRDYTELVEGSILSTCHLLMVTLEGGA
CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHEEEECCCC
ARHSYVTDCGYRYDGIDAPGSVSFLPANSQRRLRLEAVSWRWASIAISPDHFEDMTGGVH
CCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEEEECCHHHHHCCCCEE
IDAFSTRDDRFLSALLGQLAWYQVRDGHLNLPYLDAMLTALIHHLRVRYQTESRAVTERL
EEEECCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RRLPSWAIRRITDYIVAQLPGEVRVSMLAKLTGLSEGHFHRAFRATTGKTPLQFINELRI
HHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHH
QSAIQILNQHPINTAELAVAVGFSSPTYFSRVFRKAVGCSPSNYPVSIKRVRESAGTIAE
HHHHHHHHCCCCCHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
NISSVRPRSGS
HHHHCCCCCCC
>Mature Secondary Structure
MNAVAHTSYLRNLSSRAHEQSTFLWSSGQFDVARRDYTELVEGSILSTCHLLMVTLEGGA
CCCHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHEEEECCCC
ARHSYVTDCGYRYDGIDAPGSVSFLPANSQRRLRLEAVSWRWASIAISPDHFEDMTGGVH
CCCCHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEEEEECCHHHHHCCCCEE
IDAFSTRDDRFLSALLGQLAWYQVRDGHLNLPYLDAMLTALIHHLRVRYQTESRAVTERL
EEEECCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RRLPSWAIRRITDYIVAQLPGEVRVSMLAKLTGLSEGHFHRAFRATTGKTPLQFINELRI
HHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHH
QSAIQILNQHPINTAELAVAVGFSSPTYFSRVFRKAVGCSPSNYPVSIKRVRESAGTIAE
HHHHHHHHCCCCCHHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
NISSVRPRSGS
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339433; 10984043 [H]