| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is mod [H]
Identifier: 110632903
GI number: 110632903
Start: 599421
End: 601394
Strand: Direct
Name: mod [H]
Synonym: Meso_0543
Alternate gene names: 110632903
Gene position: 599421-601394 (Clockwise)
Preceding gene: 110632902
Following gene: 110632904
Centisome position: 13.58
GC content: 57.24
Gene sequence:
>1974_bases ATGGACAAGTTGAAGATGCACAGCCCAGACCTGAGCCAGGAGAACATCGCGAAGATCCGCGACCTGTTCCCCGGCTGCGT GACCGAGGCACGCGACGAGGTGACGGGCGCGGTGCGTCTTGCGGTGGATTTTGATCAGCTGCGTCAGGAACTGAGCGACC ATATCATTGAAGGGCCACAGGAGCGGTATCGGCTGGACTGGCCGGGCAAGCGCGATGCGTTGGCCGTAGCGAACGCCCCA ATCAACAAGGCGCTGCGTCCCGTTCCGGACGACAGCCTTCAGTTTGAGGCGACGAAGAATCTGTTCATCGAGGGTGATAA CCTCCAAGCGCTCAAGCTCATTCAGGACACCTATCTCGGACAGATCAAGCTGATTTACGTCGATCCTCCCTACAACACAG GAAAGGATTTTATCTATCGGGATAGCTTTGCCTCAGATCAGAATACGCACGAAATAGCCTCGGGCGAACGCAGCGAAGAA GGAGCACGCCTTGTTGCCAACTCTGAGGGTAACGGCCGTTTCCACTCCAACTGGCTGACCATGATCGCCCCGCGCCTTAG GCTCGCGAAGAACCTGCTAAAGCGGGATGGGGCAATTTTCGTCTCCTGTGACGAGGGCGAACAGCCGCGGCTACGCCTGA TCATGGATGAGATTTTCGGTCAGTCGAACTTTGTTGCGGACATGGTTTGGGCGGCCGGTCGCAAAAACGACTCGCGGTTG GTCTCCGTCTCGCACGAATACATTGTCTGCTATGCTCGTGATTCCGAATATCTGCGCGAGAACCAAGTGATTTGGCGGCA ACGCAAAAAGGGGCTTGATGAGATTTATGCGCAGTATGAGCGGCTGAAACGCCAACACGGAAACGACTTCAAGGCGATGA CTGAGGGAATGAAGGAATGGTATAGGTCGCTGGCCGATAGCCATCCTTCGAAAGCCCACAAGCATTACGCGCACGTTGAC GTGCGAGGTGTCTATTTCCCGGATAACATTTCTTGGCCTGGGGGCGGCGGGCCAAAGTATGAGGTGCTTCATCCGAGAAC CAAGAGACCCGTTAAGGTGCCCTCACGCGGCTGGATGACTAGCGATCCGAAGCGGATGCAGGAGTGGATCGACGATGACC GCGTTCATTTCGGAGACGATGAAAACTCGGTACCTTGCATAAAGAGCTATCTGAAGGACAAAGAGGTTCAGACCCCGTAT AGCGTGTTCTATCAGGACGGCCGCGCCGCCTCGAAGCGCTTGCGGGCGCTAATGGGGGGCGACCTTTTCGACTTCCCCAA GGATGAGTTGGTTCTCCAGGAAGTCATCGAGATGATGACCGAGGGCAGTGACATCATCCTCGACTTCTTCGCGGGATCGT CGACTACGGCGCATTCGGTGATGCTTCAGAATGCGAAAGATGGCGCGAATCGCAAATTTATTATGGTCCAGTTGGATGAG GCGGCGGCTGAGGATTCGGAGGCACACAGGGCCGGCTTCAAGACGATCCCCGAGGTCAGTCGCGAACGCATCCGCCGCGC AGGCAAGCAAGTTCTTGACGGCGAATGCCACCCAGATTGGAACCGCGACGTTGGCTTCCGGGTCCTGAAGGTCGACACCT CGAACATGCAGGATGTGTACTACCGTCCGGATCAGATCGATCAGAAGGACCTGCTGGCCGCCGTCGACAACATCAAGCCG GATCGTAGCGCCGAGGATTTGTTGTTCCAGGTGCTCGTCGACTGGGGCGTGGACCTGACGCTGCCGATCAAGCGCGAGAA GGTGCAGGGCAAGACCGTGTTCTTTGTCGACGGTAATGCGTTGGTTGCCTGCTTCGAGACTGGCGTGACGGAGGAACTGG TGAAGGAGCTTGCCAGCCGGGAGCCTCTGCGCGTCGTGTTCCGCGACAACGGCTTTGTGTCCGACGCGGTGAAGATCAAC GTCGAGCAGGTCTTCCGCCAGGTCTCGCCCGGCACCGACGTCAAGTCGATTTGA
Upstream 100 bases:
>100_bases GTGGCGATCAATGCCGAGCTGCGCGCTGCACGGCAGGAATTGGAGCGCCTTTCCGGCGGCGTACCCGTCACTGCCATGAC GAATGAGTAAGGGAATGACG
Downstream 100 bases:
>100_bases GGGGCTGGCCGTGAAGCTTAAATTCAAGGTCCAGCCCTATCAGACACAGGCCGTGACTGCGGTCGTGGATTGCTTCGCCG GGCAGCCGATGTCGACCGGG
Product: DNA methylase N-4/N-6
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MDKLKMHSPDLSQENIAKIRDLFPGCVTEARDEVTGAVRLAVDFDQLRQELSDHIIEGPQERYRLDWPGKRDALAVANAP INKALRPVPDDSLQFEATKNLFIEGDNLQALKLIQDTYLGQIKLIYVDPPYNTGKDFIYRDSFASDQNTHEIASGERSEE GARLVANSEGNGRFHSNWLTMIAPRLRLAKNLLKRDGAIFVSCDEGEQPRLRLIMDEIFGQSNFVADMVWAAGRKNDSRL VSVSHEYIVCYARDSEYLRENQVIWRQRKKGLDEIYAQYERLKRQHGNDFKAMTEGMKEWYRSLADSHPSKAHKHYAHVD VRGVYFPDNISWPGGGGPKYEVLHPRTKRPVKVPSRGWMTSDPKRMQEWIDDDRVHFGDDENSVPCIKSYLKDKEVQTPY SVFYQDGRAASKRLRALMGGDLFDFPKDELVLQEVIEMMTEGSDIILDFFAGSSTTAHSVMLQNAKDGANRKFIMVQLDE AAAEDSEAHRAGFKTIPEVSRERIRRAGKQVLDGECHPDWNRDVGFRVLKVDTSNMQDVYYRPDQIDQKDLLAAVDNIKP DRSAEDLLFQVLVDWGVDLTLPIKREKVQGKTVFFVDGNALVACFETGVTEELVKELASREPLRVVFRDNGFVSDAVKIN VEQVFRQVSPGTDVKSI
Sequences:
>Translated_657_residues MDKLKMHSPDLSQENIAKIRDLFPGCVTEARDEVTGAVRLAVDFDQLRQELSDHIIEGPQERYRLDWPGKRDALAVANAP INKALRPVPDDSLQFEATKNLFIEGDNLQALKLIQDTYLGQIKLIYVDPPYNTGKDFIYRDSFASDQNTHEIASGERSEE GARLVANSEGNGRFHSNWLTMIAPRLRLAKNLLKRDGAIFVSCDEGEQPRLRLIMDEIFGQSNFVADMVWAAGRKNDSRL VSVSHEYIVCYARDSEYLRENQVIWRQRKKGLDEIYAQYERLKRQHGNDFKAMTEGMKEWYRSLADSHPSKAHKHYAHVD VRGVYFPDNISWPGGGGPKYEVLHPRTKRPVKVPSRGWMTSDPKRMQEWIDDDRVHFGDDENSVPCIKSYLKDKEVQTPY SVFYQDGRAASKRLRALMGGDLFDFPKDELVLQEVIEMMTEGSDIILDFFAGSSTTAHSVMLQNAKDGANRKFIMVQLDE AAAEDSEAHRAGFKTIPEVSRERIRRAGKQVLDGECHPDWNRDVGFRVLKVDTSNMQDVYYRPDQIDQKDLLAAVDNIKP DRSAEDLLFQVLVDWGVDLTLPIKREKVQGKTVFFVDGNALVACFETGVTEELVKELASREPLRVVFRDNGFVSDAVKIN VEQVFRQVSPGTDVKSI >Mature_657_residues MDKLKMHSPDLSQENIAKIRDLFPGCVTEARDEVTGAVRLAVDFDQLRQELSDHIIEGPQERYRLDWPGKRDALAVANAP INKALRPVPDDSLQFEATKNLFIEGDNLQALKLIQDTYLGQIKLIYVDPPYNTGKDFIYRDSFASDQNTHEIASGERSEE GARLVANSEGNGRFHSNWLTMIAPRLRLAKNLLKRDGAIFVSCDEGEQPRLRLIMDEIFGQSNFVADMVWAAGRKNDSRL VSVSHEYIVCYARDSEYLRENQVIWRQRKKGLDEIYAQYERLKRQHGNDFKAMTEGMKEWYRSLADSHPSKAHKHYAHVD VRGVYFPDNISWPGGGGPKYEVLHPRTKRPVKVPSRGWMTSDPKRMQEWIDDDRVHFGDDENSVPCIKSYLKDKEVQTPY SVFYQDGRAASKRLRALMGGDLFDFPKDELVLQEVIEMMTEGSDIILDFFAGSSTTAHSVMLQNAKDGANRKFIMVQLDE AAAEDSEAHRAGFKTIPEVSRERIRRAGKQVLDGECHPDWNRDVGFRVLKVDTSNMQDVYYRPDQIDQKDLLAAVDNIKP DRSAEDLLFQVLVDWGVDLTLPIKREKVQGKTVFFVDGNALVACFETGVTEELVKELASREPLRVVFRDNGFVSDAVKIN VEQVFRQVSPGTDVKSI
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 74897; Mature: 74897
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLKMHSPDLSQENIAKIRDLFPGCVTEARDEVTGAVRLAVDFDQLRQELSDHIIEGPQ CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHCCCH ERYRLDWPGKRDALAVANAPINKALRPVPDDSLQFEATKNLFIEGDNLQALKLIQDTYLG HHEECCCCCCCCEEEEECCCHHHCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHCCC QIKLIYVDPPYNTGKDFIYRDSFASDQNTHEIASGERSEEGARLVANSEGNGRFHSNWLT EEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCEECCHHH MIAPRLRLAKNLLKRDGAIFVSCDEGEQPRLRLIMDEIFGQSNFVADMVWAAGRKNDSRL HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEE VSVSHEYIVCYARDSEYLRENQVIWRQRKKGLDEIYAQYERLKRQHGNDFKAMTEGMKEW EEEECEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YRSLADSHPSKAHKHYAHVDVRGVYFPDNISWPGGGGPKYEVLHPRTKRPVKVPSRGWMT HHHHHCCCCHHHHHCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC SDPKRMQEWIDDDRVHFGDDENSVPCIKSYLKDKEVQTPYSVFYQDGRAASKRLRALMGG CCHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCC DLFDFPKDELVLQEVIEMMTEGSDIILDFFAGSSTTAHSVMLQNAKDGANRKFIMVQLDE CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHEECCCCCCCCEEEEEEECC AAAEDSEAHRAGFKTIPEVSRERIRRAGKQVLDGECHPDWNRDVGFRVLKVDTSNMQDVY CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEE YRPDQIDQKDLLAAVDNIKPDRSAEDLLFQVLVDWGVDLTLPIKREKVQGKTVFFVDGNA ECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCHHCCCCCEEEEECCCE LVACFETGVTEELVKELASREPLRVVFRDNGFVSDAVKINVEQVFRQVSPGTDVKSI EEEEECCCCHHHHHHHHHCCCCEEEEEECCCEECCCEEEEHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDKLKMHSPDLSQENIAKIRDLFPGCVTEARDEVTGAVRLAVDFDQLRQELSDHIIEGPQ CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHCCCH ERYRLDWPGKRDALAVANAPINKALRPVPDDSLQFEATKNLFIEGDNLQALKLIQDTYLG HHEECCCCCCCCEEEEECCCHHHCCCCCCCCCEEEEECCEEEEECCCCHHHHHHHHHCCC QIKLIYVDPPYNTGKDFIYRDSFASDQNTHEIASGERSEEGARLVANSEGNGRFHSNWLT EEEEEEECCCCCCCCCCEEECCCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCEECCHHH MIAPRLRLAKNLLKRDGAIFVSCDEGEQPRLRLIMDEIFGQSNFVADMVWAAGRKNDSRL HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEE VSVSHEYIVCYARDSEYLRENQVIWRQRKKGLDEIYAQYERLKRQHGNDFKAMTEGMKEW EEEECEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH YRSLADSHPSKAHKHYAHVDVRGVYFPDNISWPGGGGPKYEVLHPRTKRPVKVPSRGWMT HHHHHCCCCHHHHHCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC SDPKRMQEWIDDDRVHFGDDENSVPCIKSYLKDKEVQTPYSVFYQDGRAASKRLRALMGG CCHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCC DLFDFPKDELVLQEVIEMMTEGSDIILDFFAGSSTTAHSVMLQNAKDGANRKFIMVQLDE CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHEECCCCCCCCEEEEEEECC AAAEDSEAHRAGFKTIPEVSRERIRRAGKQVLDGECHPDWNRDVGFRVLKVDTSNMQDVY CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEE YRPDQIDQKDLLAAVDNIKPDRSAEDLLFQVLVDWGVDLTLPIKREKVQGKTVFFVDGNA ECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCHHCCCCCEEEEECCCE LVACFETGVTEELVKELASREPLRVVFRDNGFVSDAVKINVEQVFRQVSPGTDVKSI EEEEECCCCHHHHHHHHHCCCCEEEEEECCCEECCCEEEEHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]