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The map label for this gene is iolB [H]

Identifier: 110632816

GI number: 110632816

Start: 502633

End: 503448

Strand: Direct

Name: iolB [H]

Synonym: Meso_0455

Alternate gene names: 110632816

Gene position: 502633-503448 (Clockwise)

Preceding gene: 110632815

Following gene: 110632818

Centisome position: 11.39

GC content: 61.89

Gene sequence:

>816_bases
ATGGCAAGCCTGTTGGTGAAGCCTGCCGGAACCGCAGGCAAGGTGCATGACATCACGCCGCGTTCGGCCGGTTGGGGCTA
TGTGGGCTTCAGCCTCTACCGGCTCAAGGCGGGCGAGACGGCGCAGGAGGATACCGGCGACCGGGAGGTGATCCTCGTGC
TGGTTGAAGGCAAGGCTGAGATCGCCGCCGACGGCAAAAGCTTCGGGGAGCTTGGCGACCGTATGGATGTCTTCGATCGC
CGTCCGCCACACGTGGTCTATGCCCCCAATGGCTCAAACTGGTCGGCCAAGGCGACGACCGATTGCACGCTGGCGGTTTG
CTCCGCACCGGGCACGGGCGGGCACGATGCCCAGGTAATCGGCCCCGCCGGGATTGGAACGATCGAGCGGGGAAAGGGGG
CGAACACTCGTTACATCCACAATATCGCCATGGAAGAGCGCGACGTGGCCGACAGCCTGCTTGTGGCGGAGGTTTATACG
CCGCAGGGCAACTGGTCGTCCTATCCGCCGCATCGGCATGACGAGGACGACTTTCCGAACATGACCTATCTGGAAGAGAG
CTATTACCACCGAATCAACCCTTCACAAGGCTTCGGCTTTCAGCGGGTGTTCACGGAGGACGGCAGCCTGGACGAGACGA
TGGCTGTCTCGAACCATGACGTCGTGCTGGTGCCGCGCGGGCATCATCCCTGCGGCGCGCCTTACGGCTATGAGATGTAT
TATCTCACCGTCATGGCGAGTCCGCGCCGCGCGTGGCGCTTCAAGAACCATCCCGACCACGACTGGATTTTCCAGCGCGA
CAATAAGATTGATTGA

Upstream 100 bases:

>100_bases
GGGCACGCTCTTTGTCGGCCTTGGCGTCTACTGCATCTGGGGCTTTCTGTTCGCCTTCAATCCTGACGCCGAGAACAAGG
CGGAATAGGGAGAGAATGCC

Downstream 100 bases:

>100_bases
GGCCGGCCGTTCAGGCCACCTCAGTTCCGCCCATAGACATCGTCGAAGCGGATGATGTCATCCTCGCCCAGATAGTCGCC
GCTCTGCACCTCTATGAGTA

Product: myo-inositol catabolism IolB region

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MASLLVKPAGTAGKVHDITPRSAGWGYVGFSLYRLKAGETAQEDTGDREVILVLVEGKAEIAADGKSFGELGDRMDVFDR
RPPHVVYAPNGSNWSAKATTDCTLAVCSAPGTGGHDAQVIGPAGIGTIERGKGANTRYIHNIAMEERDVADSLLVAEVYT
PQGNWSSYPPHRHDEDDFPNMTYLEESYYHRINPSQGFGFQRVFTEDGSLDETMAVSNHDVVLVPRGHHPCGAPYGYEMY
YLTVMASPRRAWRFKNHPDHDWIFQRDNKID

Sequences:

>Translated_271_residues
MASLLVKPAGTAGKVHDITPRSAGWGYVGFSLYRLKAGETAQEDTGDREVILVLVEGKAEIAADGKSFGELGDRMDVFDR
RPPHVVYAPNGSNWSAKATTDCTLAVCSAPGTGGHDAQVIGPAGIGTIERGKGANTRYIHNIAMEERDVADSLLVAEVYT
PQGNWSSYPPHRHDEDDFPNMTYLEESYYHRINPSQGFGFQRVFTEDGSLDETMAVSNHDVVLVPRGHHPCGAPYGYEMY
YLTVMASPRRAWRFKNHPDHDWIFQRDNKID
>Mature_270_residues
ASLLVKPAGTAGKVHDITPRSAGWGYVGFSLYRLKAGETAQEDTGDREVILVLVEGKAEIAADGKSFGELGDRMDVFDRR
PPHVVYAPNGSNWSAKATTDCTLAVCSAPGTGGHDAQVIGPAGIGTIERGKGANTRYIHNIAMEERDVADSLLVAEVYTP
QGNWSSYPPHRHDEDDFPNMTYLEESYYHRINPSQGFGFQRVFTEDGSLDETMAVSNHDVVLVPRGHHPCGAPYGYEMYY
LTVMASPRRAWRFKNHPDHDWIFQRDNKID

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 30002; Mature: 29870

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLLVKPAGTAGKVHDITPRSAGWGYVGFSLYRLKAGETAQEDTGDREVILVLVEGKAE
CCCEEEECCCCCCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCE
IAADGKSFGELGDRMDVFDRRPPHVVYAPNGSNWSAKATTDCTLAVCSAPGTGGHDAQVI
EEECCCHHHHHCCHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEE
GPAGIGTIERGKGANTRYIHNIAMEERDVADSLLVAEVYTPQGNWSSYPPHRHDEDDFPN
CCCCCCCCCCCCCCCCEEEEEEHHCCHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCC
MTYLEESYYHRINPSQGFGFQRVFTEDGSLDETMAVSNHDVVLVPRGHHPCGAPYGYEMY
CEEEHHHHHEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCEEE
YLTVMASPRRAWRFKNHPDHDWIFQRDNKID
EEEEEECCHHHHCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure 
ASLLVKPAGTAGKVHDITPRSAGWGYVGFSLYRLKAGETAQEDTGDREVILVLVEGKAE
CCEEEECCCCCCCEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCE
IAADGKSFGELGDRMDVFDRRPPHVVYAPNGSNWSAKATTDCTLAVCSAPGTGGHDAQVI
EEECCCHHHHHCCHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEE
GPAGIGTIERGKGANTRYIHNIAMEERDVADSLLVAEVYTPQGNWSSYPPHRHDEDDFPN
CCCCCCCCCCCCCCCCEEEEEEHHCCHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCC
MTYLEESYYHRINPSQGFGFQRVFTEDGSLDETMAVSNHDVVLVPRGHHPCGAPYGYEMY
CEEEHHHHHEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCEEE
YLTVMASPRRAWRFKNHPDHDWIFQRDNKID
EEEEEECCHHHHCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA