| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yghZ [H]
Identifier: 110632809
GI number: 110632809
Start: 494093
End: 495139
Strand: Direct
Name: yghZ [H]
Synonym: Meso_0448
Alternate gene names: 110632809
Gene position: 494093-495139 (Clockwise)
Preceding gene: 110632808
Following gene: 110632810
Centisome position: 11.2
GC content: 60.65
Gene sequence:
>1047_bases ATGAATTGGGAGCCTTCGCCTGACCGTTACGAGGGAATGCAGTATCGCCGTTGCGGCCGCTCCGGCCTCAAACTGCCCCC GATTTCTCTCGGCTTGTGGCATAATTTCGGGGAGGATCGGCCGCACGAGATGAAACAGGCGATCTGCCGCAGGGCTTTCG ACCTCGGCATCACCCATTTCGACCTAGCCAACAATTACGGCCCGCCACCGGGCTCGGCCGAGGAAGCCTTTGGGGAAATC CTGCGCACAGACTTCGCCGGTTATCGCGATCAGCTCATCATTTCCTCGAAGGCGGGCTATCTGATGTGGCCGGGGCCCTA TGGCGAGTGGGGCAGCCGCAAATATCTCATCGCGAGCTGCGACCAGAGCCTGAAGCGGATGGGGCTCGATTATGTCGATA TTTTCTATTCCCACCGCTTCGATCCGCAGACGCCCCTTGAAGAGACGATGATGGCCCTCGATCATATCGCTCGGTCGGGC CGCGCGCTTTATGTAGGCATCTCGTCCTATAATTCGCGCCGCACACGGGAGGCCGTTGCCATCCTCGAGGATCTCGGGAC GCCCTGCCTTATTCATCAGCCCAGCTACTCGATGATCAATCGCTGGGTGGAGGATGATGGCCTGCTCGACACGCTTGAAG AGCTGGGTGTTGGCTGCATCGCCTTTTCGCCGCTAGCTCAGGGCATGCTCACCGACAGATATCTGGGCGGCATTCCTCAA GACAGCCGCGCTGCGCAGGGCAAGTCGCTCCGTAAGGAGTTCATAAACGAGAAGACGCTCGGAAACATCCGCCACTTGAA CGAGATCGCGGCGCGCCGTGGCCAGAGCTTGGCGCAGATGGCGGTCGCCTGGGTACTGCGCGGCGGGCGGGTCACCTCCG CGCTCATCGGAGCTAGCCGTCCCGAGCAGGTCGAAGAGATAGTCGCAGGCCTGGAAAAGGCGGACTTCACCGCCGACGAA CTGGCGGAAATCGAATCCTATGCCCGCGAGGCCGATATCAACCTCTGGGCAGCTTCCGCAGAGAGAACCGGCCCACAGCG GAAATAA
Upstream 100 bases:
>100_bases GCCGGTGCCGGCACTGGCACGTTGAATGGGGAAGAAATCCTGTTCAACTGGCGGCTGCGCTCGTCGCGGCGCGCCGATTG CTGGCAGAAAGGGAATTTGC
Downstream 100 bases:
>100_bases TAAGCGGATTGCTCATGCCCGTTCAATTTGACGGCTGCAAGCCGTAGGGTTTCTTTCGGCGATCGATGGACACGACGATG AGGGGCGGGGGCCTATATTT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNWEPSPDRYEGMQYRRCGRSGLKLPPISLGLWHNFGEDRPHEMKQAICRRAFDLGITHFDLANNYGPPPGSAEEAFGEI LRTDFAGYRDQLIISSKAGYLMWPGPYGEWGSRKYLIASCDQSLKRMGLDYVDIFYSHRFDPQTPLEETMMALDHIARSG RALYVGISSYNSRRTREAVAILEDLGTPCLIHQPSYSMINRWVEDDGLLDTLEELGVGCIAFSPLAQGMLTDRYLGGIPQ DSRAAQGKSLRKEFINEKTLGNIRHLNEIAARRGQSLAQMAVAWVLRGGRVTSALIGASRPEQVEEIVAGLEKADFTADE LAEIESYAREADINLWAASAERTGPQRK
Sequences:
>Translated_348_residues MNWEPSPDRYEGMQYRRCGRSGLKLPPISLGLWHNFGEDRPHEMKQAICRRAFDLGITHFDLANNYGPPPGSAEEAFGEI LRTDFAGYRDQLIISSKAGYLMWPGPYGEWGSRKYLIASCDQSLKRMGLDYVDIFYSHRFDPQTPLEETMMALDHIARSG RALYVGISSYNSRRTREAVAILEDLGTPCLIHQPSYSMINRWVEDDGLLDTLEELGVGCIAFSPLAQGMLTDRYLGGIPQ DSRAAQGKSLRKEFINEKTLGNIRHLNEIAARRGQSLAQMAVAWVLRGGRVTSALIGASRPEQVEEIVAGLEKADFTADE LAEIESYAREADINLWAASAERTGPQRK >Mature_348_residues MNWEPSPDRYEGMQYRRCGRSGLKLPPISLGLWHNFGEDRPHEMKQAICRRAFDLGITHFDLANNYGPPPGSAEEAFGEI LRTDFAGYRDQLIISSKAGYLMWPGPYGEWGSRKYLIASCDQSLKRMGLDYVDIFYSHRFDPQTPLEETMMALDHIARSG RALYVGISSYNSRRTREAVAILEDLGTPCLIHQPSYSMINRWVEDDGLLDTLEELGVGCIAFSPLAQGMLTDRYLGGIPQ DSRAAQGKSLRKEFINEKTLGNIRHLNEIAARRGQSLAQMAVAWVLRGGRVTSALIGASRPEQVEEIVAGLEKADFTADE LAEIESYAREADINLWAASAERTGPQRK
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=324, Percent_Identity=34.5679012345679, Blast_Score=174, Evalue=8e-44, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=34.2679127725857, Blast_Score=171, Evalue=9e-43, Organism=Homo sapiens, GI27436964, Length=333, Percent_Identity=32.7327327327327, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI27436962, Length=327, Percent_Identity=33.0275229357798, Blast_Score=166, Evalue=2e-41, Organism=Homo sapiens, GI27436966, Length=327, Percent_Identity=32.7217125382263, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI27436971, Length=329, Percent_Identity=31.6109422492401, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI41327764, Length=212, Percent_Identity=27.8301886792453, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI41152114, Length=214, Percent_Identity=28.5046728971963, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI223718702, Length=212, Percent_Identity=27.3584905660377, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1789375, Length=346, Percent_Identity=61.5606936416185, Blast_Score=449, Evalue=1e-127, Organism=Escherichia coli, GI87081735, Length=323, Percent_Identity=33.7461300309598, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789199, Length=345, Percent_Identity=28.9855072463768, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1788070, Length=315, Percent_Identity=27.6190476190476, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788081, Length=317, Percent_Identity=27.1293375394322, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI48994888, Length=262, Percent_Identity=27.8625954198473, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1787674, Length=304, Percent_Identity=24.0131578947368, Blast_Score=66, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=334, Percent_Identity=26.3473053892216, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6319951, Length=327, Percent_Identity=24.4648318042813, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6323998, Length=331, Percent_Identity=22.9607250755287, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322615, Length=251, Percent_Identity=24.3027888446215, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=22.9452054794521, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640980, Length=334, Percent_Identity=27.2455089820359, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI45549126, Length=334, Percent_Identity=27.2455089820359, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38979; Mature: 38979
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWEPSPDRYEGMQYRRCGRSGLKLPPISLGLWHNFGEDRPHEMKQAICRRAFDLGITHF CCCCCCCCHHHCHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEE DLANNYGPPPGSAEEAFGEILRTDFAGYRDQLIISSKAGYLMWPGPYGEWGSRKYLIASC EHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCEEEHHHH DQSLKRMGLDYVDIFYSHRFDPQTPLEETMMALDHIARSGRALYVGISSYNSRRTREAVA HHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH ILEDLGTPCLIHQPSYSMINRWVEDDGLLDTLEELGVGCIAFSPLAQGMLTDRYLGGIPQ HHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCC DSRAAQGKSLRKEFINEKTLGNIRHLNEIAARRGQSLAQMAVAWVLRGGRVTSALIGASR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHCCCC PEQVEEIVAGLEKADFTADELAEIESYAREADINLWAASAERTGPQRK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCHHCCCCCCC >Mature Secondary Structure MNWEPSPDRYEGMQYRRCGRSGLKLPPISLGLWHNFGEDRPHEMKQAICRRAFDLGITHF CCCCCCCCHHHCHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEE DLANNYGPPPGSAEEAFGEILRTDFAGYRDQLIISSKAGYLMWPGPYGEWGSRKYLIASC EHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCEEEHHHH DQSLKRMGLDYVDIFYSHRFDPQTPLEETMMALDHIARSGRALYVGISSYNSRRTREAVA HHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH ILEDLGTPCLIHQPSYSMINRWVEDDGLLDTLEELGVGCIAFSPLAQGMLTDRYLGGIPQ HHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCC DSRAAQGKSLRKEFINEKTLGNIRHLNEIAARRGQSLAQMAVAWVLRGGRVTSALIGASR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHCCCC PEQVEEIVAGLEKADFTADELAEIESYAREADINLWAASAERTGPQRK HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]