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The map label for this gene is ylbK [H]

Identifier: 110632793

GI number: 110632793

Start: 478241

End: 479128

Strand: Direct

Name: ylbK [H]

Synonym: Meso_0432

Alternate gene names: 110632793

Gene position: 478241-479128 (Clockwise)

Preceding gene: 110632792

Following gene: 110632795

Centisome position: 10.84

GC content: 62.61

Gene sequence:

>888_bases
ATGGTTGATCAGAAGCGCGCCAAGGCAGAGTCCGGCTTCGTCACACGCAAGTCGTCAACCCCAAGCTTTGCCATCGCCTT
TGGCGGCGGCGGCGCGCGGGGGCTTGCGCATATCCATGTCATCGAGGCGCTGGACGAATTGGGCATTCGTCCGGCCGCCA
TTTCAGGCTCTTCCATCGGCGCGATCATGGGAGCGGGGATGGCCGCCGGCATGCAGGGCAAGGAGCTCCGCGCCCATGCA
GCCTCGGTCCTTGCCCGCCGGTCAGAGGTGGTCGCACGTATCTGGCGCGCCCGGCCGGCCAAATTCTCGGAAATGATGGA
AACGGGCCTGCGCTTGGGCCAGTTCAACGCGGAGCGCATCCTGAAGGAGTTTTTGCCGCGGCAGATACCCGACACGTTCG
AGAAGCTCGAAATCCCGCTGCGGGTAACAGCCACCGACTATTACGGCCACCACCTCACCGTATTCGATAGCGGAGAACTC
TGGTCGGCGCTTGCGGCCTCCGCGGCGCTTCCGGCGGTGTTCCGCCCGGTAATGCGCGACGGCCGCATGCTGATCGACGG
CGGCATCTACAATCCGGTTCCCTTCGACATACTGGAAGGCGCCGCCGATATTCTGATCGCCGTCGACGTGGTCGGCGTGC
CCAGCGTCCGCACGTCTAAGATTCCCAACACGATCGAAATGATGTTCGGGACGACGCAGCTCATGATGCAGTCCATCATC
GCCATGAAGCTGCAGAAGCAGCGGCCGGACATTCTGCTGAGGCCGGCTATCTCCGGCTTCCGTGTGCTCGACTTCATGAA
GATGGATGAGATCATGGCTGAAACCGCATCCATCAAGGACGAGCTGAAGCGCGGCGTGGAGGCGCTTTTGAAGCGGGACG
CGGCCTGA

Upstream 100 bases:

>100_bases
AAAACGGCAGCCGGACCCACCGGCTGCCGCAGGGAAAGGCTGGGGCCTTTTCCGGAACTGCGGGCGATACGAAGCCGTTC
GTTCTGGGAGGGCAAAGGCA

Downstream 100 bases:

>100_bases
CCCGTAAAAATTCCTAGCCCGAATTCTCCTTCACTGCCGGATCGAGGCGGCGCGCTTCGCGCGCGGGCTTTGTCAAAGGC
TCGGGCGTGACCGGACGGAC

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MVDQKRAKAESGFVTRKSSTPSFAIAFGGGGARGLAHIHVIEALDELGIRPAAISGSSIGAIMGAGMAAGMQGKELRAHA
ASVLARRSEVVARIWRARPAKFSEMMETGLRLGQFNAERILKEFLPRQIPDTFEKLEIPLRVTATDYYGHHLTVFDSGEL
WSALAASAALPAVFRPVMRDGRMLIDGGIYNPVPFDILEGAADILIAVDVVGVPSVRTSKIPNTIEMMFGTTQLMMQSII
AMKLQKQRPDILLRPAISGFRVLDFMKMDEIMAETASIKDELKRGVEALLKRDAA

Sequences:

>Translated_295_residues
MVDQKRAKAESGFVTRKSSTPSFAIAFGGGGARGLAHIHVIEALDELGIRPAAISGSSIGAIMGAGMAAGMQGKELRAHA
ASVLARRSEVVARIWRARPAKFSEMMETGLRLGQFNAERILKEFLPRQIPDTFEKLEIPLRVTATDYYGHHLTVFDSGEL
WSALAASAALPAVFRPVMRDGRMLIDGGIYNPVPFDILEGAADILIAVDVVGVPSVRTSKIPNTIEMMFGTTQLMMQSII
AMKLQKQRPDILLRPAISGFRVLDFMKMDEIMAETASIKDELKRGVEALLKRDAA
>Mature_295_residues
MVDQKRAKAESGFVTRKSSTPSFAIAFGGGGARGLAHIHVIEALDELGIRPAAISGSSIGAIMGAGMAAGMQGKELRAHA
ASVLARRSEVVARIWRARPAKFSEMMETGLRLGQFNAERILKEFLPRQIPDTFEKLEIPLRVTATDYYGHHLTVFDSGEL
WSALAASAALPAVFRPVMRDGRMLIDGGIYNPVPFDILEGAADILIAVDVVGVPSVRTSKIPNTIEMMFGTTQLMMQSII
AMKLQKQRPDILLRPAISGFRVLDFMKMDEIMAETASIKDELKRGVEALLKRDAA

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656043, Length=303, Percent_Identity=27.3927392739274, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI260656037, Length=303, Percent_Identity=27.3927392739274, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI260656041, Length=303, Percent_Identity=27.3927392739274, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI116256487, Length=303, Percent_Identity=27.3927392739274, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI260656039, Length=303, Percent_Identity=27.3927392739274, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI148727290, Length=289, Percent_Identity=27.3356401384083, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI148727335, Length=289, Percent_Identity=27.3356401384083, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI226510936, Length=285, Percent_Identity=25.9649122807018, Blast_Score=84, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323581, Length=291, Percent_Identity=26.1168384879725, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32093; Mature: 32093

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDQKRAKAESGFVTRKSSTPSFAIAFGGGGARGLAHIHVIEALDELGIRPAAISGSSIG
CCCCHHHHHHCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCCHH
AIMGAGMAAGMQGKELRAHAASVLARRSEVVARIWRARPAKFSEMMETGLRLGQFNAERI
HHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
LKEFLPRQIPDTFEKLEIPLRVTATDYYGHHLTVFDSGELWSALAASAALPAVFRPVMRD
HHHHHHHCCCCHHHHHCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHC
GRMLIDGGIYNPVPFDILEGAADILIAVDVVGVPSVRTSKIPNTIEMMFGTTQLMMQSII
CCEEEECCCCCCCCHHHHHCHHHEEEEEEECCCCCCCCCCCCCHHHHHHCHHHHHHHHHH
AMKLQKQRPDILLRPAISGFRVLDFMKMDEIMAETASIKDELKRGVEALLKRDAA
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVDQKRAKAESGFVTRKSSTPSFAIAFGGGGARGLAHIHVIEALDELGIRPAAISGSSIG
CCCCHHHHHHCCCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEECCCCHH
AIMGAGMAAGMQGKELRAHAASVLARRSEVVARIWRARPAKFSEMMETGLRLGQFNAERI
HHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
LKEFLPRQIPDTFEKLEIPLRVTATDYYGHHLTVFDSGELWSALAASAALPAVFRPVMRD
HHHHHHHCCCCHHHHHCCCEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHC
GRMLIDGGIYNPVPFDILEGAADILIAVDVVGVPSVRTSKIPNTIEMMFGTTQLMMQSII
CCEEEECCCCCCCCHHHHHCHHHEEEEEEECCCCCCCCCCCCCHHHHHHCHHHHHHHHHH
AMKLQKQRPDILLRPAISGFRVLDFMKMDEIMAETASIKDELKRGVEALLKRDAA
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]