Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632792
Identifier: 110632792
GI number: 110632792
Start: 476781
End: 478136
Strand: Direct
Name: 110632792
Synonym: Meso_0431
Alternate gene names: NA
Gene position: 476781-478136 (Clockwise)
Preceding gene: 110632791
Following gene: 110632793
Centisome position: 10.81
GC content: 61.87
Gene sequence:
>1356_bases ATGAGAATCGAAAGAACCGCATTGGCCATGGTCATGAAAGCATCACATCGCACTTGCCTGCGGGCGATGTCGCTCGGACT GGTTCTGTTTGCCCTTGTCCTTCCGGCCCGCGCTGATCTCGATATTGCCGAGGTTACTTCGCCGAAGGGCATAAAGGCAT GGCTGGTGGAGGACCAGACGGACCCGATGGTTGTCATCTCCTTCGCCTTCATGGGCGGCAGCAACAATGACCCCAAAGGC AAGGAGGGCGTCGCCGACTTGATGGCCTCGCTGCTCGACAACGGCGCCGGCGACCTGGACTCCGATACCTTCCAGCAGCG TTTGTACGAGACCGGAGCCGATCTCTCCTTCCGCGCGAGCCCGGAGCTCATTTCGGGCAGGCTGAGAGTTCTTGCCGGCG AAACGGAGGAGCCGCTGGAGCTCCTTTCGCTTGCCGTGAAGTCTCCGCGCTTCGACGAGCCCGAATTCGCCCGTGACAAA GCGGTTGCGATCTCCGACGAGCGGTCGAGCAGCAACGATCCTGACGTGCGCGGGCAAAAGGCTCTGATGGCCGCTCTTTA TGGAGATCATCCGCTGGGCCGCCCGGTGACGGAGGATACCCTTGCTGCCGTCACACGCGAGGATCTGGCGGCCTTCCACA AGAAGCTTTTCGCCCGCTCCAACCTGCTCGTGGGCGTGGTCGGCGCGATCGATCCGGCCACGCTTGAACGCGTGCTCGAC CAGGTCTTCGGCGATCTTCCGGCGGAGGCCGAGGTGGCCGAAGTCCCTGCTCCGAAGATCAATTTCGGAAAGGTGGTTCG CGAGGTCTACGATCGGCCGCAGACATCTATCAGCTTCGTCTATCCCGGCGTTTCCGCGACCAGCCCTGACGTCTATTCCG CCACGCTCCTGGCGGAGATAATGGGCGGCAGCGGCTTGAGCTCTCGGCTGTTCACGGAACTGCGCGAGAAGCGCGGCCTC ACTTATGGCGCCTATGCCAACCTGGATGCCAATATCGACTGGGGCGATCTGTCCATTGGCGTGGCCACGGGCAGCGACCG CGCGGCCGAAACGATCAGGACAACGCGGGAGGTTGTTCGCCAGATGGTCGAAGAGGGTCCGACGGAGAGGGAACTCGCCG ACGCCAAGAAATACGCGATCGGCTCCTATGCGATATCGCAGTTGAGTTCGAGCAGCCAGATCGCAAACACGCTGGTGGGC CTGCAGAGGCTTGGCCGCGGCAGGGACTACATCCAGAAGCGCGTTGGCCTTTTCGAGGCGGTTACGATGGATGAGGTGAA GGAAATGGCGACGCGGCTTCTTTCGGTCGAGCCGACAGTCCTCCTTGTCGGGCCGGAGATGAAGGCCGAGAACTGA
Upstream 100 bases:
>100_bases CGGTGACGGCCGATCAGATCCGTGAAGCAGCGCAGCGCTACCTGTCGGTTCGCCGCAGCGTGGCCGGTTATCTCCTTCCC GTCGATGCGGAGGACCCGGC
Downstream 100 bases:
>100_bases AAGAAAAACGGCAGCCGGACCCACCGGCTGCCGCAGGGAAAGGCTGGGGCCTTTTCCGGAACTGCGGGCGATACGAAGCC GTTCGTTCTGGGAGGGCAAA
Product: peptidase M16-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MRIERTALAMVMKASHRTCLRAMSLGLVLFALVLPARADLDIAEVTSPKGIKAWLVEDQTDPMVVISFAFMGGSNNDPKG KEGVADLMASLLDNGAGDLDSDTFQQRLYETGADLSFRASPELISGRLRVLAGETEEPLELLSLAVKSPRFDEPEFARDK AVAISDERSSSNDPDVRGQKALMAALYGDHPLGRPVTEDTLAAVTREDLAAFHKKLFARSNLLVGVVGAIDPATLERVLD QVFGDLPAEAEVAEVPAPKINFGKVVREVYDRPQTSISFVYPGVSATSPDVYSATLLAEIMGGSGLSSRLFTELREKRGL TYGAYANLDANIDWGDLSIGVATGSDRAAETIRTTREVVRQMVEEGPTERELADAKKYAIGSYAISQLSSSSQIANTLVG LQRLGRGRDYIQKRVGLFEAVTMDEVKEMATRLLSVEPTVLLVGPEMKAEN
Sequences:
>Translated_451_residues MRIERTALAMVMKASHRTCLRAMSLGLVLFALVLPARADLDIAEVTSPKGIKAWLVEDQTDPMVVISFAFMGGSNNDPKG KEGVADLMASLLDNGAGDLDSDTFQQRLYETGADLSFRASPELISGRLRVLAGETEEPLELLSLAVKSPRFDEPEFARDK AVAISDERSSSNDPDVRGQKALMAALYGDHPLGRPVTEDTLAAVTREDLAAFHKKLFARSNLLVGVVGAIDPATLERVLD QVFGDLPAEAEVAEVPAPKINFGKVVREVYDRPQTSISFVYPGVSATSPDVYSATLLAEIMGGSGLSSRLFTELREKRGL TYGAYANLDANIDWGDLSIGVATGSDRAAETIRTTREVVRQMVEEGPTERELADAKKYAIGSYAISQLSSSSQIANTLVG LQRLGRGRDYIQKRVGLFEAVTMDEVKEMATRLLSVEPTVLLVGPEMKAEN >Mature_451_residues MRIERTALAMVMKASHRTCLRAMSLGLVLFALVLPARADLDIAEVTSPKGIKAWLVEDQTDPMVVISFAFMGGSNNDPKG KEGVADLMASLLDNGAGDLDSDTFQQRLYETGADLSFRASPELISGRLRVLAGETEEPLELLSLAVKSPRFDEPEFARDK AVAISDERSSSNDPDVRGQKALMAALYGDHPLGRPVTEDTLAAVTREDLAAFHKKLFARSNLLVGVVGAIDPATLERVLD QVFGDLPAEAEVAEVPAPKINFGKVVREVYDRPQTSISFVYPGVSATSPDVYSATLLAEIMGGSGLSSRLFTELREKRGL TYGAYANLDANIDWGDLSIGVATGSDRAAETIRTTREVVRQMVEEGPTERELADAKKYAIGSYAISQLSSSSQIANTLVG LQRLGRGRDYIQKRVGLFEAVTMDEVKEMATRLLSVEPTVLLVGPEMKAEN
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 48800; Mature: 48800
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIERTALAMVMKASHRTCLRAMSLGLVLFALVLPARADLDIAEVTSPKGIKAWLVEDQT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEECCC DPMVVISFAFMGGSNNDPKGKEGVADLMASLLDNGAGDLDSDTFQQRLYETGADLSFRAS CCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCC PELISGRLRVLAGETEEPLELLSLAVKSPRFDEPEFARDKAVAISDERSSSNDPDVRGQK HHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHCCCEEEEECCCCCCCCCCCCHHH ALMAALYGDHPLGRPVTEDTLAAVTREDLAAFHKKLFARSNLLVGVVGAIDPATLERVLD HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH QVFGDLPAEAEVAEVPAPKINFGKVVREVYDRPQTSISFVYPGVSATSPDVYSATLLAEI HHHCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHH MGGSGLSSRLFTELREKRGLTYGAYANLDANIDWGDLSIGVATGSDRAAETIRTTREVVR HCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH QMVEEGPTERELADAKKYAIGSYAISQLSSSSQIANTLVGLQRLGRGRDYIQKRVGLFEA HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VTMDEVKEMATRLLSVEPTVLLVGPEMKAEN HHHHHHHHHHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure MRIERTALAMVMKASHRTCLRAMSLGLVLFALVLPARADLDIAEVTSPKGIKAWLVEDQT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEECCC DPMVVISFAFMGGSNNDPKGKEGVADLMASLLDNGAGDLDSDTFQQRLYETGADLSFRAS CCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEECCC PELISGRLRVLAGETEEPLELLSLAVKSPRFDEPEFARDKAVAISDERSSSNDPDVRGQK HHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHCCCEEEEECCCCCCCCCCCCHHH ALMAALYGDHPLGRPVTEDTLAAVTREDLAAFHKKLFARSNLLVGVVGAIDPATLERVLD HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH QVFGDLPAEAEVAEVPAPKINFGKVVREVYDRPQTSISFVYPGVSATSPDVYSATLLAEI HHHCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHH MGGSGLSSRLFTELREKRGLTYGAYANLDANIDWGDLSIGVATGSDRAAETIRTTREVVR HCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH QMVEEGPTERELADAKKYAIGSYAISQLSSSSQIANTLVGLQRLGRGRDYIQKRVGLFEA HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VTMDEVKEMATRLLSVEPTVLLVGPEMKAEN HHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]