Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632776
Identifier: 110632776
GI number: 110632776
Start: 458748
End: 460265
Strand: Direct
Name: 110632776
Synonym: Meso_0415
Alternate gene names: NA
Gene position: 458748-460265 (Clockwise)
Preceding gene: 110632775
Following gene: 110632777
Centisome position: 10.4
GC content: 61.0
Gene sequence:
>1518_bases ATGCTAGACCACACGACAATCCTCGACGGAATAGCGCTCGGCCTATCGGTGGCAGTCCACCCGACCAATCTCCTGTTCGC TTTCTTAGGGTGCCTGATCGGCACGCTCGTGGGTGTCTTGCCGGGTCTCGGACCCACGGCGACTATCGCCATTCTTCTGC CCATCACCTACACGCTCTCGCCGGTAACAGGCCTTATCACCCTGGCTGGCATCTATTATGGGGCGCAGTACGGTGGCTCG ACCACCTCCATCCTGCTGCGCCTTCCGGGCGAGGCTTCCTCGGTGATCACGGCGCTCGACGGCTATGGCATGACCCGCAA GGGAAGGGGAGGCGCCGCGCTCACCATTGCCGCCGTCGGGTCGTTCTTCGCCGGCACGGTGGGCACCTTGTTCATCGCCG TCTTCGCGCCCGTTCTTTCGGTCGTGGTGCTGAAATTCGGCGCACCCGAATATTTCATGCTGATGGTGATCGGTCTGGTC GCTTCGGTCATCCTTGCTCAGGGGTCTGTCCTACGCGCCCTGGCAATGATCATGATCGGCCTGCTGCTGGGGATGGTGGG GACCGACATGAATTCCGGGCAGTACCGCTATACGTTCGGTTCCTACGAGCTTCTCCAAGGCATCCCCTTCTTGCCTCTGG TGGTGGGCCTGTTCGGCATCGCTGACATTCTCGTTGCGGTGGAACGATATGTGCGCGACGAAACGGTCCCAACGATCAGC CGCATATCGAGCCTGTGGCCGAACTCCGAGGAGGTGCGCAAGGCGGTCCCCGCCTCTTTACGGGGCACCGTGATCGGCTT GTTCCTTGGCCTTCTGCCTGGCGGCGGTGCGCTGATGAGCTCCTTTGTGGCCTACTCTGTCGAGAAGCGGTTCTCCAAGA CGCCGGAAGGATTTGGCGACGGGGATCCGGCAGGGGTGGCCGCGCCGGAATCCGCAAACAATGCTGGCTCGCAGACCGCC TTTCTCCCGCTCCTGACCTTGGGCTTGCCGTCCAATGCGGTGATGGCGCTGATGACGGGCGCGATGCTCATTCAGGGCAT CGTGCCCGGACCGCAGATCATGACCAAGCAGCCCGATCTTTTCTGGGGGCTGATCGCTTCCATGTGGATCGGCAATCTGA TGCTACTGGTCATCAACCTGCCACTGGTCGGCCTGTGGGTACAGCTGCTCAAGATCCGCTACCGCATGCTGTTCCCCGTC ATCATCGTTGTCAGCCTGATCGGTATCTATGGCGTCAATTTCTCCACCTTTGACATCTTCCTGACGGCGCTGTTCGGATT GTTCGGTTACCTGATGCACAAATGGCGCTGCGAGCCCGCGCCGCTGATTCTCGCCTTCGTCCTCGGCCCCATGATGGAGC AGTATTTCCGCCGCGCCCTGCTCATTGGCCGCGGCGACCTCGGCATCTTCATCGATCGCCCCATCAGCCTGGCCATGCTG GTCATTCTCATCGGTCTCTTCATCAGCCTGGCCGCACCTCACTTCCGATCGTTCCGCAGGGAGGCTTTTTCGGAATGA
Upstream 100 bases:
>100_bases TTGCCGACACTGCTATTGGCAACTGCGATCACCCTCGGCGCCTGCGTGGTGTTCGTTCTTCTTCTCGGCCTTCAAATCCC GTTATTCCCGAGGTTCTGAG
Downstream 100 bases:
>100_bases TCGTGATCAACCGTCCCATACGGACACAACAGGAGGAAACGAAAAAATGATTTATGCGCTTTCACGCCGCTCCTTCATGA TCGGCGCTGCGGGTGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MLDHTTILDGIALGLSVAVHPTNLLFAFLGCLIGTLVGVLPGLGPTATIAILLPITYTLSPVTGLITLAGIYYGAQYGGS TTSILLRLPGEASSVITALDGYGMTRKGRGGAALTIAAVGSFFAGTVGTLFIAVFAPVLSVVVLKFGAPEYFMLMVIGLV ASVILAQGSVLRALAMIMIGLLLGMVGTDMNSGQYRYTFGSYELLQGIPFLPLVVGLFGIADILVAVERYVRDETVPTIS RISSLWPNSEEVRKAVPASLRGTVIGLFLGLLPGGGALMSSFVAYSVEKRFSKTPEGFGDGDPAGVAAPESANNAGSQTA FLPLLTLGLPSNAVMALMTGAMLIQGIVPGPQIMTKQPDLFWGLIASMWIGNLMLLVINLPLVGLWVQLLKIRYRMLFPV IIVVSLIGIYGVNFSTFDIFLTALFGLFGYLMHKWRCEPAPLILAFVLGPMMEQYFRRALLIGRGDLGIFIDRPISLAML VILIGLFISLAAPHFRSFRREAFSE
Sequences:
>Translated_505_residues MLDHTTILDGIALGLSVAVHPTNLLFAFLGCLIGTLVGVLPGLGPTATIAILLPITYTLSPVTGLITLAGIYYGAQYGGS TTSILLRLPGEASSVITALDGYGMTRKGRGGAALTIAAVGSFFAGTVGTLFIAVFAPVLSVVVLKFGAPEYFMLMVIGLV ASVILAQGSVLRALAMIMIGLLLGMVGTDMNSGQYRYTFGSYELLQGIPFLPLVVGLFGIADILVAVERYVRDETVPTIS RISSLWPNSEEVRKAVPASLRGTVIGLFLGLLPGGGALMSSFVAYSVEKRFSKTPEGFGDGDPAGVAAPESANNAGSQTA FLPLLTLGLPSNAVMALMTGAMLIQGIVPGPQIMTKQPDLFWGLIASMWIGNLMLLVINLPLVGLWVQLLKIRYRMLFPV IIVVSLIGIYGVNFSTFDIFLTALFGLFGYLMHKWRCEPAPLILAFVLGPMMEQYFRRALLIGRGDLGIFIDRPISLAML VILIGLFISLAAPHFRSFRREAFSE >Mature_505_residues MLDHTTILDGIALGLSVAVHPTNLLFAFLGCLIGTLVGVLPGLGPTATIAILLPITYTLSPVTGLITLAGIYYGAQYGGS TTSILLRLPGEASSVITALDGYGMTRKGRGGAALTIAAVGSFFAGTVGTLFIAVFAPVLSVVVLKFGAPEYFMLMVIGLV ASVILAQGSVLRALAMIMIGLLLGMVGTDMNSGQYRYTFGSYELLQGIPFLPLVVGLFGIADILVAVERYVRDETVPTIS RISSLWPNSEEVRKAVPASLRGTVIGLFLGLLPGGGALMSSFVAYSVEKRFSKTPEGFGDGDPAGVAAPESANNAGSQTA FLPLLTLGLPSNAVMALMTGAMLIQGIVPGPQIMTKQPDLFWGLIASMWIGNLMLLVINLPLVGLWVQLLKIRYRMLFPV IIVVSLIGIYGVNFSTFDIFLTALFGLFGYLMHKWRCEPAPLILAFVLGPMMEQYFRRALLIGRGDLGIFIDRPISLAML VILIGLFISLAAPHFRSFRREAFSE
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 53763; Mature: 53763
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHTTILDGIALGLSVAVHPTNLLFAFLGCLIGTLVGVLPGLGPTATIAILLPITYTLS CCCCHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH PVTGLITLAGIYYGAQYGGSTTSILLRLPGEASSVITALDGYGMTRKGRGGAALTIAAVG HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHH SFFAGTVGTLFIAVFAPVLSVVVLKFGAPEYFMLMVIGLVASVILAQGSVLRALAMIMIG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLLGMVGTDMNSGQYRYTFGSYELLQGIPFLPLVVGLFGIADILVAVERYVRDETVPTIS HHHHHHCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RISSLWPNSEEVRKAVPASLRGTVIGLFLGLLPGGGALMSSFVAYSVEKRFSKTPEGFGD HHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCC GDPAGVAAPESANNAGSQTAFLPLLTLGLPSNAVMALMTGAMLIQGIVPGPQIMTKQPDL CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FWGLIASMWIGNLMLLVINLPLVGLWVQLLKIRYRMLFPVIIVVSLIGIYGVNFSTFDIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LTALFGLFGYLMHKWRCEPAPLILAFVLGPMMEQYFRRALLIGRGDLGIFIDRPISLAML HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHH VILIGLFISLAAPHFRSFRREAFSE HHHHHHHHHHHCHHHHHHHHHHCCC >Mature Secondary Structure MLDHTTILDGIALGLSVAVHPTNLLFAFLGCLIGTLVGVLPGLGPTATIAILLPITYTLS CCCCHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH PVTGLITLAGIYYGAQYGGSTTSILLRLPGEASSVITALDGYGMTRKGRGGAALTIAAVG HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHH SFFAGTVGTLFIAVFAPVLSVVVLKFGAPEYFMLMVIGLVASVILAQGSVLRALAMIMIG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LLLGMVGTDMNSGQYRYTFGSYELLQGIPFLPLVVGLFGIADILVAVERYVRDETVPTIS HHHHHHCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RISSLWPNSEEVRKAVPASLRGTVIGLFLGLLPGGGALMSSFVAYSVEKRFSKTPEGFGD HHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCC GDPAGVAAPESANNAGSQTAFLPLLTLGLPSNAVMALMTGAMLIQGIVPGPQIMTKQPDL CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FWGLIASMWIGNLMLLVINLPLVGLWVQLLKIRYRMLFPVIIVVSLIGIYGVNFSTFDIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LTALFGLFGYLMHKWRCEPAPLILAFVLGPMMEQYFRRALLIGRGDLGIFIDRPISLAML HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHH VILIGLFISLAAPHFRSFRREAFSE HHHHHHHHHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]