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The map label for this gene is 110632708

Identifier: 110632708

GI number: 110632708

Start: 387915

End: 389294

Strand: Reverse

Name: 110632708

Synonym: Meso_0347

Alternate gene names: NA

Gene position: 389294-387915 (Counterclockwise)

Preceding gene: 110632709

Following gene: 110632707

Centisome position: 8.82

GC content: 64.28

Gene sequence:

>1380_bases
ATGCATATCGATGAATTGAGAAAGGCGGTTCGCGGGGCGGTGACGACCCGTGAAAGCGCCGAATACGAGGCCGTCCGCAC
GGGATTGTTGTGGAACGCCCGCAAACCGGACCGCTTTCCTGAAGTTGTCGTCAAAGCGATGGACGCCGGCGACGTGCAGA
CGGCGGTGAAATTCGCCGCCGCCAACGGAATGCGCGTCTCCGCGCGCGGTGGCGGCCACCACTTCTCCACCATCGCACTG
CAGGATTGCGTGGTTATCGACCTATCGGCGATGAATGCGCTGGAAATCGATGCCGTAGCCGGCACCGCGCGTGCGCAGCC
TGCGGTTACCAATGGCAGGCTCGCCGCGGCGGCGGCCGAATACGGTCTCGCTTTTCCCACCGGTCACTGCGCCAGCGTGC
CTTTGTCGGGCTATCTGCTCGGCGGCGGGTTCGGCTGGAACGCCGGTGCCTGGGGCATCGCCTGCCACAATGTGGAAAGC
GTCAAGGTGGTGCTGGCCGACGGTTCACTGGTGACCGCGAGCGAGGCGGAGAATGCCGATATTTTCTGGGCTGCGCGCGG
AGCGGGCCCGGAGTTCTTCGGCGTCGTGACCGAATACAGGCTGCGCCTGCACGAACTGCCACGAGCGATCCGCACCAGCG
TGTGGGTCTACCCGATAGGCGAGGTGGATGCGGTGGAGCGCTGGATGAGCCGGACGATGCGAACCGTGCCGCGCAATGTC
GAGTTCACGGCCGTGCTCTCCTCAGCACCGCCGCCTCTTGCCGGCAAGGCGACAAAGACGGTCTCGGCGGTTGCGACCAT
TTTTGCGTATACGGAAGAGGAGGCACAGGCCACGCTCGAAAAAATAGCGGCCGGCGCACCGGAAAGCGCGCTCGACATCC
AACTCGGGATGGAGACGCCTTTCGAGGTCCTTTACCTGATCATGGGGCAATTTTTCCTGGAAGGGCGGCGCTACGCGGCC
GACACCAACTGGTCGGCCGATCCGGCCCTGCAGATGGCGATCATGGCGGAAGCGATAGAGGCTGCTCCTTCGGCGGAATC
CTTCGCGCTCGGTGTCGTGTTGCCGCCGCCGGACGGCACCATGCCGGACGCCGCCTTTTCCATGGTTGGCCCGGCCTTCG
GCTGCACTTATGCGATCTGGCAAGACGATGCCCAGGACCAGGCGGCTCTCTCCTGGGTGCGGGCGACAAGCGAAAAGATC
GCGCCGATCTCCCTCGGCCACTATATCGGCGAGGCCGATCTCGATATCGCCGGCCGGTCGCACCGTTCGTTCTCGCCTGA
GGCATTAGAACGGTTGCGGCACCTGCAGCGCAAATACGATCAGGCCGGCCTGTTCCATCGCCCCGAACCGGACGTGGAAC
CGCTCAAAAGAGCCGGTTGA

Upstream 100 bases:

>100_bases
CTTCGCCCAGTTCAATCCGCGTGTGACGTGCGAGCACCATGAGATCAAGCACAGTCACTGAGCCGCATTCCCGCGAGCCG
CGAAAAAGGAGGACAGCAAC

Downstream 100 bases:

>100_bases
AGGCACCCAGTCCTCCCGCAGGAGGACTGGACGCCCTCCAATTTGGGCTCGATCATATGCCGCCGAGACGACTGAAAGGA
GCCCCCCGGCTGAATGGATT

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: 6-HDNO [H]

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MHIDELRKAVRGAVTTRESAEYEAVRTGLLWNARKPDRFPEVVVKAMDAGDVQTAVKFAAANGMRVSARGGGHHFSTIAL
QDCVVIDLSAMNALEIDAVAGTARAQPAVTNGRLAAAAAEYGLAFPTGHCASVPLSGYLLGGGFGWNAGAWGIACHNVES
VKVVLADGSLVTASEAENADIFWAARGAGPEFFGVVTEYRLRLHELPRAIRTSVWVYPIGEVDAVERWMSRTMRTVPRNV
EFTAVLSSAPPPLAGKATKTVSAVATIFAYTEEEAQATLEKIAAGAPESALDIQLGMETPFEVLYLIMGQFFLEGRRYAA
DTNWSADPALQMAIMAEAIEAAPSAESFALGVVLPPPDGTMPDAAFSMVGPAFGCTYAIWQDDAQDQAALSWVRATSEKI
APISLGHYIGEADLDIAGRSHRSFSPEALERLRHLQRKYDQAGLFHRPEPDVEPLKRAG

Sequences:

>Translated_459_residues
MHIDELRKAVRGAVTTRESAEYEAVRTGLLWNARKPDRFPEVVVKAMDAGDVQTAVKFAAANGMRVSARGGGHHFSTIAL
QDCVVIDLSAMNALEIDAVAGTARAQPAVTNGRLAAAAAEYGLAFPTGHCASVPLSGYLLGGGFGWNAGAWGIACHNVES
VKVVLADGSLVTASEAENADIFWAARGAGPEFFGVVTEYRLRLHELPRAIRTSVWVYPIGEVDAVERWMSRTMRTVPRNV
EFTAVLSSAPPPLAGKATKTVSAVATIFAYTEEEAQATLEKIAAGAPESALDIQLGMETPFEVLYLIMGQFFLEGRRYAA
DTNWSADPALQMAIMAEAIEAAPSAESFALGVVLPPPDGTMPDAAFSMVGPAFGCTYAIWQDDAQDQAALSWVRATSEKI
APISLGHYIGEADLDIAGRSHRSFSPEALERLRHLQRKYDQAGLFHRPEPDVEPLKRAG
>Mature_459_residues
MHIDELRKAVRGAVTTRESAEYEAVRTGLLWNARKPDRFPEVVVKAMDAGDVQTAVKFAAANGMRVSARGGGHHFSTIAL
QDCVVIDLSAMNALEIDAVAGTARAQPAVTNGRLAAAAAEYGLAFPTGHCASVPLSGYLLGGGFGWNAGAWGIACHNVES
VKVVLADGSLVTASEAENADIFWAARGAGPEFFGVVTEYRLRLHELPRAIRTSVWVYPIGEVDAVERWMSRTMRTVPRNV
EFTAVLSSAPPPLAGKATKTVSAVATIFAYTEEEAQATLEKIAAGAPESALDIQLGMETPFEVLYLIMGQFFLEGRRYAA
DTNWSADPALQMAIMAEAIEAAPSAESFALGVVLPPPDGTMPDAAFSMVGPAFGCTYAIWQDDAQDQAALSWVRATSEKI
APISLGHYIGEADLDIAGRSHRSFSPEALERLRHLQRKYDQAGLFHRPEPDVEPLKRAG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: =1.5.3.6 [H]

Molecular weight: Translated: 49185; Mature: 49185

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00862 OX2_COVAL_FAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIDELRKAVRGAVTTRESAEYEAVRTGLLWNARKPDRFPEVVVKAMDAGDVQTAVKFAA
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCHHHHHHHHH
ANGMRVSARGGGHHFSTIALQDCVVIDLSAMNALEIDAVAGTARAQPAVTNGRLAAAAAE
CCCEEEEECCCCCEEEEEEECCEEEEEECCCCEEEEEHHCCCCCCCCCCCCCCHHHHHHH
YGLAFPTGHCASVPLSGYLLGGGFGWNAGAWGIACHNVESVKVVLADGSLVTASEAENAD
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEEEEECCCEEEECCCCCCE
IFWAARGAGPEFFGVVTEYRLRLHELPRAIRTSVWVYPIGEVDAVERWMSRTMRTVPRNV
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCC
EFTAVLSSAPPPLAGKATKTVSAVATIFAYTEEEAQATLEKIAAGAPESALDIQLGMETP
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH
FEVLYLIMGQFFLEGRRYAADTNWSADPALQMAIMAEAIEAAPSAESFALGVVLPPPDGT
HHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
MPDAAFSMVGPAFGCTYAIWQDDAQDQAALSWVRATSEKIAPISLGHYIGEADLDIAGRS
CCHHHHHHHCHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCEECCCC
HRSFSPEALERLRHLQRKYDQAGLFHRPEPDVEPLKRAG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MHIDELRKAVRGAVTTRESAEYEAVRTGLLWNARKPDRFPEVVVKAMDAGDVQTAVKFAA
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCHHHHHHHHH
ANGMRVSARGGGHHFSTIALQDCVVIDLSAMNALEIDAVAGTARAQPAVTNGRLAAAAAE
CCCEEEEECCCCCEEEEEEECCEEEEEECCCCEEEEEHHCCCCCCCCCCCCCCHHHHHHH
YGLAFPTGHCASVPLSGYLLGGGFGWNAGAWGIACHNVESVKVVLADGSLVTASEAENAD
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEEEEECCCEEEECCCCCCE
IFWAARGAGPEFFGVVTEYRLRLHELPRAIRTSVWVYPIGEVDAVERWMSRTMRTVPRNV
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHCCCCC
EFTAVLSSAPPPLAGKATKTVSAVATIFAYTEEEAQATLEKIAAGAPESALDIQLGMETP
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCH
FEVLYLIMGQFFLEGRRYAADTNWSADPALQMAIMAEAIEAAPSAESFALGVVLPPPDGT
HHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
MPDAAFSMVGPAFGCTYAIWQDDAQDQAALSWVRATSEKIAPISLGHYIGEADLDIAGRS
CCHHHHHHHCHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCEECCCC
HRSFSPEALERLRHLQRKYDQAGLFHRPEPDVEPLKRAG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3622516; 2680607; 2115879 [H]