Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632609
Identifier: 110632609
GI number: 110632609
Start: 279662
End: 280651
Strand: Direct
Name: 110632609
Synonym: Meso_0248
Alternate gene names: NA
Gene position: 279662-280651 (Clockwise)
Preceding gene: 110632608
Following gene: 110632613
Centisome position: 6.34
GC content: 56.46
Gene sequence:
>990_bases ATGAAAATCCCCTCTCTCGATGATGAGACGATCCAGAAGATCATCCAGACCTATAGGGAGACAGGAAATTTCAGAGAGAC AGGCAGGATTCACGGCGTAGCGGAAAGCAGCGTACGTAAGTATGTGAAGAAGGCGCGTGAGGAAGTCCAATACACTCCGG ACCTGGGCGACCTTGGCACCGGTAAGCCGCGCATTCGCGTCAGGGCCTACAACCCCAATATGACGCGGGAACTGCAGGCG CGGCGTGTGATCTGCATCGGTGACATGCACCGCAAGCCGGGACAACCGATAGAAATCATGCGCTTCATTGGCCGGTATGT GGCTGAGACGCGCCCCGATAATGTCATTCAGATTGGCGACTTTTTAGACATGGAGAGCTGCGAATTTCACAGCGCTCCCG GCTCTGCTGCGCAAATGCAGCGGCCCTGCGTTCTGGATGAGATCGACCACGGCGATGAATCCCTGAGCGAGTACCATAAG GAAGTCGGGGTAGGGGAAATTCCGCACCACGTAACGCTGGGGAACCATGAGTTTCGCGCCAATCGCCTTGAGGAGCTTGC CCCCAATCTGACCGGCACAGTCACTATCCAGATCGATCAGCTTTTCTCCCGCTACAGGTGGGCCATTACCCCCTACAAGC ACTGGATGTTCCTTGAAGGCGTCGGCTTCACCCACGTTCCCCTGAGCATCATGGGAAAGCCGGTGGGCGGCAGATACCCG GAAAACACCATCGGCAACCAATCCACGCATTCTGTCGTCTTCGGCCATACCCACCGGTACAACCACGTCACCGTGCCGAA GATCGGGATCAACAATTCGATCACCGTGACGAACGTGGGTTGTGCAATGCCCTACGGCTACATCCCCAACTACGCCGATG GCTGCACAACGGGTTACTCCTACGGCATCGCAGATTTGCGGTTGCGGGGAGGCCGCGTCGAAAGCGCCAGCTTTATCTCA ATGCTCGACTTGCAGGAGCGATTTTCCTAA
Upstream 100 bases:
>100_bases GCGTCATGGTCGCGCCGGTTGGTTTCTCGGCCTCGCTGGTGGGTGTGGGCTACGTTGTACCAGGCCGCGTTGTTTGTGAC CTCCTTGCGCGGGGTGCCTG
Downstream 100 bases:
>100_bases TGACTAACCGCGTCCATATCCGCGTATCGATGGAAGGCAATCAGCCCAAATGGGAACTGATGCATGACGGCCTGAAGATC ACCGAACTGTCATTCATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKIPSLDDETIQKIIQTYRETGNFRETGRIHGVAESSVRKYVKKAREEVQYTPDLGDLGTGKPRIRVRAYNPNMTRELQA RRVICIGDMHRKPGQPIEIMRFIGRYVAETRPDNVIQIGDFLDMESCEFHSAPGSAAQMQRPCVLDEIDHGDESLSEYHK EVGVGEIPHHVTLGNHEFRANRLEELAPNLTGTVTIQIDQLFSRYRWAITPYKHWMFLEGVGFTHVPLSIMGKPVGGRYP ENTIGNQSTHSVVFGHTHRYNHVTVPKIGINNSITVTNVGCAMPYGYIPNYADGCTTGYSYGIADLRLRGGRVESASFIS MLDLQERFS
Sequences:
>Translated_329_residues MKIPSLDDETIQKIIQTYRETGNFRETGRIHGVAESSVRKYVKKAREEVQYTPDLGDLGTGKPRIRVRAYNPNMTRELQA RRVICIGDMHRKPGQPIEIMRFIGRYVAETRPDNVIQIGDFLDMESCEFHSAPGSAAQMQRPCVLDEIDHGDESLSEYHK EVGVGEIPHHVTLGNHEFRANRLEELAPNLTGTVTIQIDQLFSRYRWAITPYKHWMFLEGVGFTHVPLSIMGKPVGGRYP ENTIGNQSTHSVVFGHTHRYNHVTVPKIGINNSITVTNVGCAMPYGYIPNYADGCTTGYSYGIADLRLRGGRVESASFIS MLDLQERFS >Mature_329_residues MKIPSLDDETIQKIIQTYRETGNFRETGRIHGVAESSVRKYVKKAREEVQYTPDLGDLGTGKPRIRVRAYNPNMTRELQA RRVICIGDMHRKPGQPIEIMRFIGRYVAETRPDNVIQIGDFLDMESCEFHSAPGSAAQMQRPCVLDEIDHGDESLSEYHK EVGVGEIPHHVTLGNHEFRANRLEELAPNLTGTVTIQIDQLFSRYRWAITPYKHWMFLEGVGFTHVPLSIMGKPVGGRYP ENTIGNQSTHSVVFGHTHRYNHVTVPKIGINNSITVTNVGCAMPYGYIPNYADGCTTGYSYGIADLRLRGGRVESASFIS MLDLQERFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37141; Mature: 37141
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPSLDDETIQKIIQTYRETGNFRETGRIHGVAESSVRKYVKKAREEVQYTPDLGDLGT CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC GKPRIRVRAYNPNMTRELQARRVICIGDMHRKPGQPIEIMRFIGRYVAETRPDNVIQIGD CCCEEEEEEECCCCHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC FLDMESCEFHSAPGSAAQMQRPCVLDEIDHGDESLSEYHKEVGVGEIPHHVTLGNHEFRA CCCCCCCCCCCCCCCHHHHCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHH NRLEELAPNLTGTVTIQIDQLFSRYRWAITPYKHWMFLEGVGFTHVPLSIMGKPVGGRYP HHHHHHCCCCCEEEEEEHHHHHHHHHEEECCHHHEEEEECCCCCCCCHHHCCCCCCCCCC ENTIGNQSTHSVVFGHTHRYNHVTVPKIGINNSITVTNVGCAMPYGYIPNYADGCTTGYS CCCCCCCCCCEEEEECCCCCCEEECCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC YGIADLRLRGGRVESASFISMLDLQERFS CCCEEEEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKIPSLDDETIQKIIQTYRETGNFRETGRIHGVAESSVRKYVKKAREEVQYTPDLGDLGT CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC GKPRIRVRAYNPNMTRELQARRVICIGDMHRKPGQPIEIMRFIGRYVAETRPDNVIQIGD CCCEEEEEEECCCCHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC FLDMESCEFHSAPGSAAQMQRPCVLDEIDHGDESLSEYHKEVGVGEIPHHVTLGNHEFRA CCCCCCCCCCCCCCCHHHHCCCCCHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHH NRLEELAPNLTGTVTIQIDQLFSRYRWAITPYKHWMFLEGVGFTHVPLSIMGKPVGGRYP HHHHHHCCCCCEEEEEEHHHHHHHHHEEECCHHHEEEEECCCCCCCCHHHCCCCCCCCCC ENTIGNQSTHSVVFGHTHRYNHVTVPKIGINNSITVTNVGCAMPYGYIPNYADGCTTGYS CCCCCCCCCCEEEEECCCCCCEEECCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC YGIADLRLRGGRVESASFISMLDLQERFS CCCEEEEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA