Click here to switch to the map view.

The map label for this gene is 110632580

Identifier: 110632580

GI number: 110632580

Start: 250838

End: 251257

Strand: Direct

Name: 110632580

Synonym: Meso_0219

Alternate gene names: NA

Gene position: 250838-251257 (Clockwise)

Preceding gene: 110632579

Following gene: 110632581

Centisome position: 5.68

GC content: 56.9

Gene sequence:

>420_bases
ATGAACGCGAAGGACAAGATCCGCGCGGCCAAGGCCATATCGATCATGCTCAATTCATTTCCTCTACAGCACGGCACTGA
TGCTGAGGTTCAGTTGGCAAGCTTCCTGGAGTGCATCGACCAATTCTCGCCTGAGGCTGTGGAGGAAACCTGCCTTCGAT
ATCGGCGCGGCGAAATTGTCGGGCACGATGCCCGGTTCGCGCCTTCAACGGCGCAATTCACTCAATCCGTGAAAGAGCGG
CAAAGCCATCTCGATTGGCTCAATGCGTCGCGTATCGCGCCGGAGCGGCAAATCCCCAAGCCATACTCGCCGCGCGTCAG
CAAAGAGAAGATGCAGGCATTCACCGACGCACTGCATGGGAGGCGTTCATGGGAAAGCCTGTCGGAAGAATTTGGCATCC
CTGTGAGGGATGTCGACTGA

Upstream 100 bases:

>100_bases
TGGCTACATCAGGGCCGTTGGGAAGACGAGATAGAAGCGCCGCGCCCGAGCAATACAATCTCAGCAGCCCAATCCATCAT
AGCCAGACTGGAGCGCGACC

Downstream 100 bases:

>100_bases
ATGAATGGACCCCTGAGTTGTGGGAAATCGCAACAGCAGATTGGGGGAACTGGGAAACGCAAGAGGTAAGAAATGCCGTC
AGCAAAACTAAACCCGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNAKDKIRAAKAISIMLNSFPLQHGTDAEVQLASFLECIDQFSPEAVEETCLRYRRGEIVGHDARFAPSTAQFTQSVKER
QSHLDWLNASRIAPERQIPKPYSPRVSKEKMQAFTDALHGRRSWESLSEEFGIPVRDVD

Sequences:

>Translated_139_residues
MNAKDKIRAAKAISIMLNSFPLQHGTDAEVQLASFLECIDQFSPEAVEETCLRYRRGEIVGHDARFAPSTAQFTQSVKER
QSHLDWLNASRIAPERQIPKPYSPRVSKEKMQAFTDALHGRRSWESLSEEFGIPVRDVD
>Mature_139_residues
MNAKDKIRAAKAISIMLNSFPLQHGTDAEVQLASFLECIDQFSPEAVEETCLRYRRGEIVGHDARFAPSTAQFTQSVKER
QSHLDWLNASRIAPERQIPKPYSPRVSKEKMQAFTDALHGRRSWESLSEEFGIPVRDVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15817; Mature: 15817

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKDKIRAAKAISIMLNSFPLQHGTDAEVQLASFLECIDQFSPEAVEETCLRYRRGEIV
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
GHDARFAPSTAQFTQSVKERQSHLDWLNASRIAPERQIPKPYSPRVSKEKMQAFTDALHG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
RRSWESLSEEFGIPVRDVD
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNAKDKIRAAKAISIMLNSFPLQHGTDAEVQLASFLECIDQFSPEAVEETCLRYRRGEIV
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
GHDARFAPSTAQFTQSVKERQSHLDWLNASRIAPERQIPKPYSPRVSKEKMQAFTDALHG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
RRSWESLSEEFGIPVRDVD
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA