| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110632565
Identifier: 110632565
GI number: 110632565
Start: 241217
End: 241630
Strand: Reverse
Name: 110632565
Synonym: Meso_0203
Alternate gene names: NA
Gene position: 241630-241217 (Counterclockwise)
Preceding gene: 110632566
Following gene: 110632564
Centisome position: 5.48
GC content: 56.76
Gene sequence:
>414_bases ATGGCGGGGAAACAGTCAGAAAAGCCGATCTATGCCTTCATCAGACGCGGAAACAATCTCGTGCCAGAGATGGACATGGA TTTGCGCGCCCTTGATGGCGTGGCGCAGGGACAGCGCGTGAAGGTCGATATCAAGGCCTTCCGCAGCCTCCCCCGCCTAA GGGCATACTGGTCTATGTTGCATGAAGTCGTCGCGGCCACGGAATGCGCGGCTTCTGCCGAGCGCCTTCACGAGGCGATG AAGCTGGAGCTTGGCATTGTTGACTTGGTGAAGGTAGGCAATCTGACGGTCGCCATTCCCGGATCCATCGCTTTCGACCG AATGAACGAAGCGGAAATGTCCGAATTTTTCAATATCGCTCAGCGCTGGCTGGCAGAGAAATACGGTTATGTGCCGCAAG CGAGGGCCGCATGA
Upstream 100 bases:
>100_bases GGCAAATATCCGATGTGGTCAACAACCATCAGCCTGAGCAAAGCGGTTACGTCCACGACGATCTGGACGACGACCCATTG CCTTTCTAGGAGCAGCGGCG
Downstream 100 bases:
>100_bases CGCGCGTCGTTTCAGAACTGGAGTTCCGCACGAGGCTGCAAACAGCGCTGCGGTCAGCAGAATATACTTGGGTTGGGGCG GTGACTGGCCCAGGTAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAGKQSEKPIYAFIRRGNNLVPEMDMDLRALDGVAQGQRVKVDIKAFRSLPRLRAYWSMLHEVVAATECAASAERLHEAM KLELGIVDLVKVGNLTVAIPGSIAFDRMNEAEMSEFFNIAQRWLAEKYGYVPQARAA
Sequences:
>Translated_137_residues MAGKQSEKPIYAFIRRGNNLVPEMDMDLRALDGVAQGQRVKVDIKAFRSLPRLRAYWSMLHEVVAATECAASAERLHEAM KLELGIVDLVKVGNLTVAIPGSIAFDRMNEAEMSEFFNIAQRWLAEKYGYVPQARAA >Mature_136_residues AGKQSEKPIYAFIRRGNNLVPEMDMDLRALDGVAQGQRVKVDIKAFRSLPRLRAYWSMLHEVVAATECAASAERLHEAMK LELGIVDLVKVGNLTVAIPGSIAFDRMNEAEMSEFFNIAQRWLAEKYGYVPQARAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15341; Mature: 15210
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKQSEKPIYAFIRRGNNLVPEMDMDLRALDGVAQGQRVKVDIKAFRSLPRLRAYWSML CCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHH HEVVAATECAASAERLHEAMKLELGIVDLVKVGNLTVAIPGSIAFDRMNEAEMSEFFNIA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCHHHHHCCHHHHHHHHHHH QRWLAEKYGYVPQARAA HHHHHHHHCCCCCCCCC >Mature Secondary Structure AGKQSEKPIYAFIRRGNNLVPEMDMDLRALDGVAQGQRVKVDIKAFRSLPRLRAYWSML CCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHH HEVVAATECAASAERLHEAMKLELGIVDLVKVGNLTVAIPGSIAFDRMNEAEMSEFFNIA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCHHHHHCCHHHHHHHHHHH QRWLAEKYGYVPQARAA HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA