| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632561
Identifier: 110632561
GI number: 110632561
Start: 238263
End: 239357
Strand: Reverse
Name: 110632561
Synonym: Meso_0199
Alternate gene names: NA
Gene position: 239357-238263 (Counterclockwise)
Preceding gene: 110632562
Following gene: 110632560
Centisome position: 5.42
GC content: 59.36
Gene sequence:
>1095_bases ATGAGTGACCGCCCTGAATTGGTGCAAAAGGCATTTGAAGCCAGAGATACCGGTTTTGACTACGGTCCTTATGCCAAAGC TCTGCTTTCGTACATAGAAGCACTCGAAGCCGCTGCCCTCGCCAGAGCGGAAGCCAATGCCGAGGGCCGGGAGGTGATGG GAGAGCAGGAAATCTTGCGGCTGAAGTGGGAACGGGACGAGGCGGTCAGGATCGGTCTTTTCCATGCTCGGTGCCGCAAG GCCACCGAAGCACGGGTGACGGATGCTCTGCGCGCATTAAAGGCGATCCGTATTAGATGCCAGGAAGGAGATAAACGGGC TGACTGGCTTCCGATTATTGACCGATTAGCTGGCGACGCTGAAGCCGCTCTCGCCCAAGCAAGGCATCCCATAGAAATGC TTAAGGACGAAGCGGGAGCGTCCCGTTACGCGGAAGTGCTAGAGACTGCTAAGGCACTGCGGGAGGCCCAGCGCGCCTAT CTTGCTGATCGTGGTAATGATGTTCTCGGACAGGTCGTAGCCGAGGCCGCCGAAGCGCTAGACGGAGCCCTCGCCAGAGC GGAAGCCAATGCCGGAGAGCCGGTAATAGGAGACGAGCGCATATATCCAAATGAACCCTTCGGCTCCGCCCTCACGGCAG GCAAGCCGAACCGGGAGGAGTTGGAGTCAGCGGCCAAGGTGGCCTTGCTGTACCTTGATAGTGGATTTCTAGCCTGCGAT GTGTGCGGCCATCAGATGCCGACCAAGGACACCGACGCTGCGCATACACTGCGCGATGCCCTCACGGCAGGCAAGCCGGA GCAGGCGGTGCCGAGCGAGCCGGACTGGTGGTGGCGCGACTTCGACCCCGAAGACAGCGGCGACTCTCCGCACGAGGCGC TGCGTAATGTGCCGGATTTCTGCGTTTGCCTTCTTCGGAGCAGCTATAACGGCCCCGATAAGTTTGCATTTCGATCACCG ACGCTCAACCCTGATGACGATGATGATGAAGTCATCCTATTCGATACGGAACACGAAGCTCTCGCAGCTGCCAAGGAACG GGCAGAAGCGATGAAGGACGCCGCCCCTACAGCAGGAGGTGGCGATGCGGAGTAG
Upstream 100 bases:
>100_bases TACTACCGCATAGAGGGCGAGTGCCTAGCATGGGCGCTCATACCTGATGCGACAGTGGTTGAGTCCGCCATCGCCCGCTC GCTTGTGAAGGGAGGCGGGG
Downstream 100 bases:
>100_bases GCTGACGGGCAGCGCCGGTACGGTGGAGGTGAGTACCGGTGATCGGTTCCACGCTGACGGCGTGGAGTGGGAGATTGTCG GCTTTACGGGCGAGTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSDRPELVQKAFEARDTGFDYGPYAKALLSYIEALEAAALARAEANAEGREVMGEQEILRLKWERDEAVRIGLFHARCRK ATEARVTDALRALKAIRIRCQEGDKRADWLPIIDRLAGDAEAALAQARHPIEMLKDEAGASRYAEVLETAKALREAQRAY LADRGNDVLGQVVAEAAEALDGALARAEANAGEPVIGDERIYPNEPFGSALTAGKPNREELESAAKVALLYLDSGFLACD VCGHQMPTKDTDAAHTLRDALTAGKPEQAVPSEPDWWWRDFDPEDSGDSPHEALRNVPDFCVCLLRSSYNGPDKFAFRSP TLNPDDDDDEVILFDTEHEALAAAKERAEAMKDAAPTAGGGDAE
Sequences:
>Translated_364_residues MSDRPELVQKAFEARDTGFDYGPYAKALLSYIEALEAAALARAEANAEGREVMGEQEILRLKWERDEAVRIGLFHARCRK ATEARVTDALRALKAIRIRCQEGDKRADWLPIIDRLAGDAEAALAQARHPIEMLKDEAGASRYAEVLETAKALREAQRAY LADRGNDVLGQVVAEAAEALDGALARAEANAGEPVIGDERIYPNEPFGSALTAGKPNREELESAAKVALLYLDSGFLACD VCGHQMPTKDTDAAHTLRDALTAGKPEQAVPSEPDWWWRDFDPEDSGDSPHEALRNVPDFCVCLLRSSYNGPDKFAFRSP TLNPDDDDDEVILFDTEHEALAAAKERAEAMKDAAPTAGGGDAE >Mature_363_residues SDRPELVQKAFEARDTGFDYGPYAKALLSYIEALEAAALARAEANAEGREVMGEQEILRLKWERDEAVRIGLFHARCRKA TEARVTDALRALKAIRIRCQEGDKRADWLPIIDRLAGDAEAALAQARHPIEMLKDEAGASRYAEVLETAKALREAQRAYL ADRGNDVLGQVVAEAAEALDGALARAEANAGEPVIGDERIYPNEPFGSALTAGKPNREELESAAKVALLYLDSGFLACDV CGHQMPTKDTDAAHTLRDALTAGKPEQAVPSEPDWWWRDFDPEDSGDSPHEALRNVPDFCVCLLRSSYNGPDKFAFRSPT LNPDDDDDEVILFDTEHEALAAAKERAEAMKDAAPTAGGGDAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39719; Mature: 39588
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRPELVQKAFEARDTGFDYGPYAKALLSYIEALEAAALARAEANAEGREVMGEQEILR CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHH LKWERDEAVRIGLFHARCRKATEARVTDALRALKAIRIRCQEGDKRADWLPIIDRLAGDA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCH EAALAQARHPIEMLKDEAGASRYAEVLETAKALREAQRAYLADRGNDVLGQVVAEAAEAL HHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DGALARAEANAGEPVIGDERIYPNEPFGSALTAGKPNREELESAAKVALLYLDSGFLACD HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCEEEE VCGHQMPTKDTDAAHTLRDALTAGKPEQAVPSEPDWWWRDFDPEDSGDSPHEALRNVPDF HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHH CVCLLRSSYNGPDKFAFRSPTLNPDDDDDEVILFDTEHEALAAAKERAEAMKDAAPTAGG HHHHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCC GDAE CCCC >Mature Secondary Structure SDRPELVQKAFEARDTGFDYGPYAKALLSYIEALEAAALARAEANAEGREVMGEQEILR CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHH LKWERDEAVRIGLFHARCRKATEARVTDALRALKAIRIRCQEGDKRADWLPIIDRLAGDA HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCH EAALAQARHPIEMLKDEAGASRYAEVLETAKALREAQRAYLADRGNDVLGQVVAEAAEAL HHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH DGALARAEANAGEPVIGDERIYPNEPFGSALTAGKPNREELESAAKVALLYLDSGFLACD HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCEEEE VCGHQMPTKDTDAAHTLRDALTAGKPEQAVPSEPDWWWRDFDPEDSGDSPHEALRNVPDF HHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHH CVCLLRSSYNGPDKFAFRSPTLNPDDDDDEVILFDTEHEALAAAKERAEAMKDAAPTAGG HHHHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCC GDAE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA