| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632536
Identifier: 110632536
GI number: 110632536
Start: 217206
End: 218048
Strand: Reverse
Name: 110632536
Synonym: Meso_0174
Alternate gene names: NA
Gene position: 218048-217206 (Counterclockwise)
Preceding gene: 110632543
Following gene: 110632533
Centisome position: 4.94
GC content: 61.8
Gene sequence:
>843_bases ATGCAAACCGATCCCGTGACGGCACCTGCCACTATCGCAATCGCCCCCAATGGCGCGCGACGCACTAAAGCCGACCATCC CGCCCTGCCGCTGACGGCAAGAGAGCTGGCGGACACGGCGGCGGCGTGTCTCGATGCGGGGGCAGCGATGATCCACATGC ATGTACGCGACAAACAAGACCGGCACATTCTTGAGGCAGAGGCCTATGCGGAGGCGATCAGCGCCGTGCGGAAGGCTGTG GGGAAAAAGCTGGTGCTTCAGATCACGACTGAAGCGGTTGGCCGTTATCAACCGCCCGAGCAGATGGAGATTGTGCGTCA GGTTCGGCCCGAAGCCGCCTCACTCGCACTGAAAGAATTGGTGCCCCAGGCCTCGCACGAGGCCGAATTCGCGCGCTTTC TGGCGTTCATGAAACAGGAAAATATCCTTCCGCAGATCATCCTCTATCACCCGGATGAAGCCCGGCAGCTCAAGGAGATG ATGGCCCGCGGAGTCTTGCCTTTTGATGATCTGCCGGTCCTCTACGTGCTTGGCCGTTACACGGAAGGCCAGCGCTCAGC GCCCGCGGATCTGCTGCCATTTCTCGCACCAGACATGCCGCGCTTCCGGCATTTCATGGTCTGCGCCTTCGGCCCGCGCG AAGCCGCTTGCGGGACGGCTGCCGTCCTCATGGGCGGCCATGTACGCACCGGCTTCGAAAACAATATCTTTTTGCCTGAC GGATGCATCGCGCCCGACAATGCCGCGCTCGTGGCCACCGTTGCGCAAGCCTTAAGCGGGCTGGGGCACGCAGTGGCGGA TGCCGACCAGTTGCGTGCCGACTGGGCTTCTCTTTTTAGATGA
Upstream 100 bases:
>100_bases CCGCGGCAAAAGTCGCACAATCCATGAGAAGCATCCTAGACCGGCAATTCCAGCTATGCAACAAATGTTGCACGGTCTGC AACGAATGGAGAATGCGGTG
Downstream 100 bases:
>100_bases CGCAGCCGGGATCGGTCCTTCCGATCAGTCTTCAAAGGGATGCGCCGGGCATTGACCAGCCCGACGCGCCCACCGGTTGA ATGTGGAAAATCCTAGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MQTDPVTAPATIAIAPNGARRTKADHPALPLTARELADTAAACLDAGAAMIHMHVRDKQDRHILEAEAYAEAISAVRKAV GKKLVLQITTEAVGRYQPPEQMEIVRQVRPEAASLALKELVPQASHEAEFARFLAFMKQENILPQIILYHPDEARQLKEM MARGVLPFDDLPVLYVLGRYTEGQRSAPADLLPFLAPDMPRFRHFMVCAFGPREAACGTAAVLMGGHVRTGFENNIFLPD GCIAPDNAALVATVAQALSGLGHAVADADQLRADWASLFR
Sequences:
>Translated_280_residues MQTDPVTAPATIAIAPNGARRTKADHPALPLTARELADTAAACLDAGAAMIHMHVRDKQDRHILEAEAYAEAISAVRKAV GKKLVLQITTEAVGRYQPPEQMEIVRQVRPEAASLALKELVPQASHEAEFARFLAFMKQENILPQIILYHPDEARQLKEM MARGVLPFDDLPVLYVLGRYTEGQRSAPADLLPFLAPDMPRFRHFMVCAFGPREAACGTAAVLMGGHVRTGFENNIFLPD GCIAPDNAALVATVAQALSGLGHAVADADQLRADWASLFR >Mature_280_residues MQTDPVTAPATIAIAPNGARRTKADHPALPLTARELADTAAACLDAGAAMIHMHVRDKQDRHILEAEAYAEAISAVRKAV GKKLVLQITTEAVGRYQPPEQMEIVRQVRPEAASLALKELVPQASHEAEFARFLAFMKQENILPQIILYHPDEARQLKEM MARGVLPFDDLPVLYVLGRYTEGQRSAPADLLPFLAPDMPRFRHFMVCAFGPREAACGTAAVLMGGHVRTGFENNIFLPD GCIAPDNAALVATVAQALSGLGHAVADADQLRADWASLFR
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30418; Mature: 30418
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDPVTAPATIAIAPNGARRTKADHPALPLTARELADTAAACLDAGAAMIHMHVRDKQD CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCC RHILEAEAYAEAISAVRKAVGKKLVLQITTEAVGRYQPPEQMEIVRQVRPEAASLALKEL HHHHHHHHHHHHHHHHHHHHCHHHEEEEEHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH VPQASHEAEFARFLAFMKQENILPQIILYHPDEARQLKEMMARGVLPFDDLPVLYVLGRY CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHCC TEGQRSAPADLLPFLAPDMPRFRHFMVCAFGPREAACGTAAVLMGGHVRTGFENNIFLPD CCCCCCCCHHHHHHHCCCCHHHHHEEEEECCCCHHHHHHHHHHHCCCEECCCCCCEECCC GCIAPDNAALVATVAQALSGLGHAVADADQLRADWASLFR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTDPVTAPATIAIAPNGARRTKADHPALPLTARELADTAAACLDAGAAMIHMHVRDKQD CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCC RHILEAEAYAEAISAVRKAVGKKLVLQITTEAVGRYQPPEQMEIVRQVRPEAASLALKEL HHHHHHHHHHHHHHHHHHHHCHHHEEEEEHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH VPQASHEAEFARFLAFMKQENILPQIILYHPDEARQLKEMMARGVLPFDDLPVLYVLGRY CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHCC TEGQRSAPADLLPFLAPDMPRFRHFMVCAFGPREAACGTAAVLMGGHVRTGFENNIFLPD CCCCCCCCHHHHHHHCCCCHHHHHEEEEECCCCHHHHHHHHHHHCCCEECCCCCCEECCC GCIAPDNAALVATVAQALSGLGHAVADADQLRADWASLFR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA