| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is ordL [H]
Identifier: 110632522
GI number: 110632522
Start: 195713
End: 196999
Strand: Reverse
Name: ordL [H]
Synonym: Meso_0160
Alternate gene names: 110632522
Gene position: 196999-195713 (Counterclockwise)
Preceding gene: 110632523
Following gene: 110632521
Centisome position: 4.46
GC content: 61.77
Gene sequence:
>1287_bases ATGCCTCACCAATCCCCCATTTCTCCCGGCTACTCCTGGTATGAGGATACCATAGGCCTGCGGCCGGAATATCCGCGACT CGACGGTGACCGGCAAGCGGATGTAGCAATTGTCGGCGGGGGGTTCACGGGCCTGTCGGCGGCGGTCCATCTTGCCAAGG CAGGCGCGGATGTCGCCCTGATCGAGGCACACAGGATGGGCGACGGCGCGTCCGGCCGAAATGGAGGCCAGCTCGGCACC GGTCAGCGCGCCTGGGCGGAGGAGCTGGAATCTGATCTCGGCTACACGCGGTCGAAGGCGCTTTTCGATCTCGCCGAGGA AGCCAAGGCGCATCTTATCGATTTCGCGCAGGTGAATGGAATCGAGATCGATTACATGCCGGGGCAGCTTTCCGTCGTCC ATAGGCGGCGGTATGTCAACGCATACCGCGCCCATGCAGACATCATGCGCGAGCGCTACTCCTATCCGCATATCAGCTTC ATGGGAGCCGAGGAGACCAGGGAGCGGCTGGGATCCACACGCTATGTGGCTGGTATCCGCGACACGGGAACCGGCCACAT TCATCCGTTGAAACTGGTGATCGGTACCGCGCGGATAGCAGCCGCGGCCGGAGCCCACCTTTTTGAAGGCACACGCGCCA CAAACATCAATACGCTTTCCGGAAAAGTGCGGGTGGCGACGCCCTTCGGCACGATCACGGCAGAGAAATGCCTCATTGCG ACCGATGCATATACCGGCAATCTGCAGCCGGCGGTCGCAGCCCACCTTCTTCCCATCGGCTCCTTCATTGGCGCGACCGT GCCGCTTGGAGCGGATAGCCCCGTGCTTCCGGGTGGAGAAAGCGTCGATGATTCCCGTTTCGTCGTCCGCTACTTTCGGA AGTCTAAAGACGGGCGGCTGCTCTTTGGCGGACGGGAAGTCTATTCCAAGGGCAGCCCGCGTGAAATCCGCGCCCAGATC AGGCGCCAAATCGCTGAAGTTTACCCATATCTGCGCGATATCGAGATCACCCATGCCTGGGGCGGCTCCGTCGGCATCAC CATGCCGCGCCGTCCCTTCGTGAGGGAAGTGATGCCCAACGTCATCGCCGCGGGTGGCTATTCCGGTCATGGCGTGATGC TGGCGAATTTCATGGGCCGGCTCTATGCGGAAGCCGCCGCAGGAAACCGGGATCGCCTCAAACTGCTCGAGGATTTGCGC ATTCCACAGTTCCCCGGAGGGACCCGCCTGCGCCATTCCCTCCTTTTCCTCGCGCTGAATTGGTACGCGCTGCGAGACCG AATCTAG
Upstream 100 bases:
>100_bases TTAAGCGAGTAGCGAATAGGGTTTAGCGAGTAGGGATGACATTCTTAATCTTCCGCCAGCCCGCCATTCGCTATTCGCTA CTCCCTATTCGCTGGTTGCC
Downstream 100 bases:
>100_bases GCGCTGGTAACCATCCCGGCGCTCGCCAGGAGTGAAAGCTTGCAAGGCTGGCTTCCCAACCTATCCTCTTGATACGGAAA CGCCGTCTTATCGCGCCCCG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MPHQSPISPGYSWYEDTIGLRPEYPRLDGDRQADVAIVGGGFTGLSAAVHLAKAGADVALIEAHRMGDGASGRNGGQLGT GQRAWAEELESDLGYTRSKALFDLAEEAKAHLIDFAQVNGIEIDYMPGQLSVVHRRRYVNAYRAHADIMRERYSYPHISF MGAEETRERLGSTRYVAGIRDTGTGHIHPLKLVIGTARIAAAAGAHLFEGTRATNINTLSGKVRVATPFGTITAEKCLIA TDAYTGNLQPAVAAHLLPIGSFIGATVPLGADSPVLPGGESVDDSRFVVRYFRKSKDGRLLFGGREVYSKGSPREIRAQI RRQIAEVYPYLRDIEITHAWGGSVGITMPRRPFVREVMPNVIAAGGYSGHGVMLANFMGRLYAEAAAGNRDRLKLLEDLR IPQFPGGTRLRHSLLFLALNWYALRDRI
Sequences:
>Translated_428_residues MPHQSPISPGYSWYEDTIGLRPEYPRLDGDRQADVAIVGGGFTGLSAAVHLAKAGADVALIEAHRMGDGASGRNGGQLGT GQRAWAEELESDLGYTRSKALFDLAEEAKAHLIDFAQVNGIEIDYMPGQLSVVHRRRYVNAYRAHADIMRERYSYPHISF MGAEETRERLGSTRYVAGIRDTGTGHIHPLKLVIGTARIAAAAGAHLFEGTRATNINTLSGKVRVATPFGTITAEKCLIA TDAYTGNLQPAVAAHLLPIGSFIGATVPLGADSPVLPGGESVDDSRFVVRYFRKSKDGRLLFGGREVYSKGSPREIRAQI RRQIAEVYPYLRDIEITHAWGGSVGITMPRRPFVREVMPNVIAAGGYSGHGVMLANFMGRLYAEAAAGNRDRLKLLEDLR IPQFPGGTRLRHSLLFLALNWYALRDRI >Mature_427_residues PHQSPISPGYSWYEDTIGLRPEYPRLDGDRQADVAIVGGGFTGLSAAVHLAKAGADVALIEAHRMGDGASGRNGGQLGTG QRAWAEELESDLGYTRSKALFDLAEEAKAHLIDFAQVNGIEIDYMPGQLSVVHRRRYVNAYRAHADIMRERYSYPHISFM GAEETRERLGSTRYVAGIRDTGTGHIHPLKLVIGTARIAAAAGAHLFEGTRATNINTLSGKVRVATPFGTITAEKCLIAT DAYTGNLQPAVAAHLLPIGSFIGATVPLGADSPVLPGGESVDDSRFVVRYFRKSKDGRLLFGGREVYSKGSPREIRAQIR RQIAEVYPYLRDIEITHAWGGSVGITMPRRPFVREVMPNVIAAGGYSGHGVMLANFMGRLYAEAAAGNRDRLKLLEDLRI PQFPGGTRLRHSLLFLALNWYALRDRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=420, Percent_Identity=32.1428571428571, Blast_Score=218, Evalue=6e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 46721; Mature: 46590
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHQSPISPGYSWYEDTIGLRPEYPRLDGDRQADVAIVGGGFTGLSAAVHLAKAGADVAL CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEE IEAHRMGDGASGRNGGQLGTGQRAWAEELESDLGYTRSKALFDLAEEAKAHLIDFAQVNG EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC IEIDYMPGQLSVVHRRRYVNAYRAHADIMRERYSYPHISFMGAEETRERLGSTRYVAGIR EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCEEEEEEC DTGTGHIHPLKLVIGTARIAAAAGAHLFEGTRATNINTLSGKVRVATPFGTITAEKCLIA CCCCCCEEEEHHHHHHHHHHHHHCHHHHCCCCCCCEEECCCEEEEECCCCCCCCCCEEEE TDAYTGNLQPAVAAHLLPIGSFIGATVPLGADSPVLPGGESVDDSRFVVRYFRKSKDGRL ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEE LFGGREVYSKGSPREIRAQIRRQIAEVYPYLRDIEITHAWGGSVGITMPRRPFVREVMPN EECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEECCCCCHHHHHHHHH VIAAGGYSGHGVMLANFMGRLYAEAAAGNRDRLKLLEDLRIPQFPGGTRLRHSLLFLALN HEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH WYALRDRI HHHHHCCC >Mature Secondary Structure PHQSPISPGYSWYEDTIGLRPEYPRLDGDRQADVAIVGGGFTGLSAAVHLAKAGADVAL CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEE IEAHRMGDGASGRNGGQLGTGQRAWAEELESDLGYTRSKALFDLAEEAKAHLIDFAQVNG EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC IEIDYMPGQLSVVHRRRYVNAYRAHADIMRERYSYPHISFMGAEETRERLGSTRYVAGIR EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCEEEEEEC DTGTGHIHPLKLVIGTARIAAAAGAHLFEGTRATNINTLSGKVRVATPFGTITAEKCLIA CCCCCCEEEEHHHHHHHHHHHHHCHHHHCCCCCCCEEECCCEEEEECCCCCCCCCCEEEE TDAYTGNLQPAVAAHLLPIGSFIGATVPLGADSPVLPGGESVDDSRFVVRYFRKSKDGRL ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEE LFGGREVYSKGSPREIRAQIRRQIAEVYPYLRDIEITHAWGGSVGITMPRRPFVREVMPN EECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEECCCCCHHHHHHHHH VIAAGGYSGHGVMLANFMGRLYAEAAAGNRDRLKLLEDLRIPQFPGGTRLRHSLLFLALN HEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH WYALRDRI HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430; 10400573 [H]