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The map label for this gene is srpC [H]

Identifier: 110632515

GI number: 110632515

Start: 186333

End: 187733

Strand: Reverse

Name: srpC [H]

Synonym: Meso_0153

Alternate gene names: 110632515

Gene position: 187733-186333 (Counterclockwise)

Preceding gene: 110632516

Following gene: 110632513

Centisome position: 4.25

GC content: 61.6

Gene sequence:

>1401_bases
ATGAGCGAATCCTTGTCCAAAGCGGTGGGGCCAGTGCCCGCTCGCGAGCACGGAATTCCCTTCTTAGAGGGCGTAAAGGT
TTGGCTCAGGGTGGCGGCCTTAAGCTTTGGCGGGCCTGCGGGGCAGATTGCAGTGATGCACCGAATCATCGTGGAGGAGA
AGCGCTGGATCGGCGAGAGCCGCTTTCTCCATGCTCTAAACTACTGCATGCTGCTTCCCGGCCCCGAAGCGCAGCAGCTT
GCCGTCTATATCGGCTGGCTTATGCATCGCACGGCGGGCGGTCTGGTTGCAGGCACACTCTTCGTGCTGCCCGGCTTTCT
TTCCATCCTGGGGCTCAGCTATATCTATGCCGCGTTCGGCAATGTCGATCTCGTCGAAGGCCTGTTCTTCGGCCTCAAGG
CGGCGGTGCTCGCCGTGGTTCTCCACGCAGTGGTGCGGATTGGCAAGCGGGCGCTCAAGAACCGGGCCATGCTGGCGATT
GCCGCAGCGGCGTTCATCGCGATCTTCTTCTTCGACGTGCCGTTTCCGGTCATTATTCTTTCTGCGGCCCTCATCGGCTA
TCTGGGCGGCAGGGCCGGGTCTTCCCTGTTCCGGATCGGCGGCGGGCACGGCAAGACAAGCGCTGTCGTCACAGCCGATC
AAGACTCCGTGCTTGGAGAAGAAGTGCCAGCGCATGCCCGGCCAAATGTCGCGTGGTCGCTAAAAATATCGATCATCCTG
CTCGTGCTCTGGCTGGCGCCCGTCGCGATCATCGTCGGCACTCTGGGGCTGAACAACGTCTTCAGCCAAATAGCCCTCTT
CTTCAGCCAGATGGCCGTGCTGACCTTCGGCGGCGCCTACGCGGTGCTTGCCTATGTGGCACAGCTGGCCGTGGAGCATT
ACGGCTGGTTGCGGCCCGGCGAGATGCTCGACGGTTTAGGCATGGCGGAGACCACTCCCGGTCCGCTGATCATGGTCCTC
CAGTTCGTGGGCTTCATGGGCGCCTTTCGCGATCCCGGGCCGCTCGACCCCATGAGCGCAGCCACCCTGGGCGCAATCCT
CACCACCTGGGTAACCTTCGTCCCCTGTTTCCTCTGGATCTTTCTCGGTGCTCCCTTTGTCGAGACCTTGCGCGAGAACC
GTGCCGTTACGGGCGCCATGTCAGCGATCACCGCAGCCGTCGTCGGCGTCATCCTCAATCTGGCGATCTGGTTTTCACTG
CACGTGCTCTTTGGCACGCTTACGCTGGTGAGGGGTTATGGCATGAGCGTCGAGGTGCCCATCTGGTCAAGCGTCAATTG
GCCAGCGGTGGTCCTGACGGCCGCCTCTCTTCTTGCGATTTTCCTTTTCAGAGCGCCGCTTGCCGCGGTCCTTTTCTCTG
CCGCGCTTGCTGGACTGGCGTGGCGGATGCTGCTCTTTTAA

Upstream 100 bases:

>100_bases
TCGCAAGGTGCCGTCTTGACCGTGCACCAAACTTGCGCCACCCCTCTCGCCAAGCGCGCCAATCCCGCCGCGCCTTACCA
GGGTCAGTAGAGAGCACGGC

Downstream 100 bases:

>100_bases
GCTCGCTTCAGAATGCAGGCAAATCGCGACCGGAAGCTTTCGAAGCTGCCGCCAACGTATTGGCCATCAGCATGGCGATG
GTCATCGGGCCTACACCTCC

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MSESLSKAVGPVPAREHGIPFLEGVKVWLRVAALSFGGPAGQIAVMHRIIVEEKRWIGESRFLHALNYCMLLPGPEAQQL
AVYIGWLMHRTAGGLVAGTLFVLPGFLSILGLSYIYAAFGNVDLVEGLFFGLKAAVLAVVLHAVVRIGKRALKNRAMLAI
AAAAFIAIFFFDVPFPVIILSAALIGYLGGRAGSSLFRIGGGHGKTSAVVTADQDSVLGEEVPAHARPNVAWSLKISIIL
LVLWLAPVAIIVGTLGLNNVFSQIALFFSQMAVLTFGGAYAVLAYVAQLAVEHYGWLRPGEMLDGLGMAETTPGPLIMVL
QFVGFMGAFRDPGPLDPMSAATLGAILTTWVTFVPCFLWIFLGAPFVETLRENRAVTGAMSAITAAVVGVILNLAIWFSL
HVLFGTLTLVRGYGMSVEVPIWSSVNWPAVVLTAASLLAIFLFRAPLAAVLFSAALAGLAWRMLLF

Sequences:

>Translated_466_residues
MSESLSKAVGPVPAREHGIPFLEGVKVWLRVAALSFGGPAGQIAVMHRIIVEEKRWIGESRFLHALNYCMLLPGPEAQQL
AVYIGWLMHRTAGGLVAGTLFVLPGFLSILGLSYIYAAFGNVDLVEGLFFGLKAAVLAVVLHAVVRIGKRALKNRAMLAI
AAAAFIAIFFFDVPFPVIILSAALIGYLGGRAGSSLFRIGGGHGKTSAVVTADQDSVLGEEVPAHARPNVAWSLKISIIL
LVLWLAPVAIIVGTLGLNNVFSQIALFFSQMAVLTFGGAYAVLAYVAQLAVEHYGWLRPGEMLDGLGMAETTPGPLIMVL
QFVGFMGAFRDPGPLDPMSAATLGAILTTWVTFVPCFLWIFLGAPFVETLRENRAVTGAMSAITAAVVGVILNLAIWFSL
HVLFGTLTLVRGYGMSVEVPIWSSVNWPAVVLTAASLLAIFLFRAPLAAVLFSAALAGLAWRMLLF
>Mature_465_residues
SESLSKAVGPVPAREHGIPFLEGVKVWLRVAALSFGGPAGQIAVMHRIIVEEKRWIGESRFLHALNYCMLLPGPEAQQLA
VYIGWLMHRTAGGLVAGTLFVLPGFLSILGLSYIYAAFGNVDLVEGLFFGLKAAVLAVVLHAVVRIGKRALKNRAMLAIA
AAAFIAIFFFDVPFPVIILSAALIGYLGGRAGSSLFRIGGGHGKTSAVVTADQDSVLGEEVPAHARPNVAWSLKISIILL
VLWLAPVAIIVGTLGLNNVFSQIALFFSQMAVLTFGGAYAVLAYVAQLAVEHYGWLRPGEMLDGLGMAETTPGPLIMVLQ
FVGFMGAFRDPGPLDPMSAATLGAILTTWVTFVPCFLWIFLGAPFVETLRENRAVTGAMSAITAAVVGVILNLAIWFSLH
VLFGTLTLVRGYGMSVEVPIWSSVNWPAVVLTAASLLAIFLFRAPLAAVLFSAALAGLAWRMLLF

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 49644; Mature: 49513

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESLSKAVGPVPAREHGIPFLEGVKVWLRVAALSFGGPAGQIAVMHRIIVEEKRWIGES
CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHH
RFLHALNYCMLLPGPEAQQLAVYIGWLMHRTAGGLVAGTLFVLPGFLSILGLSYIYAAFG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVDLVEGLFFGLKAAVLAVVLHAVVRIGKRALKNRAMLAIAAAAFIAIFFFDVPFPVIIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SAALIGYLGGRAGSSLFRIGGGHGKTSAVVTADQDSVLGEEVPAHARPNVAWSLKISIIL
HHHHHHHHCCCCCCCCEEECCCCCCCCEEEECCCHHHHHCCCCCCCCCCCEEHHHHHHHH
LVLWLAPVAIIVGTLGLNNVFSQIALFFSQMAVLTFGGAYAVLAYVAQLAVEHYGWLRPG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCH
EMLDGLGMAETTPGPLIMVLQFVGFMGAFRDPGPLDPMSAATLGAILTTWVTFVPCFLWI
HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FLGAPFVETLRENRAVTGAMSAITAAVVGVILNLAIWFSLHVLFGTLTLVRGYGMSVEVP
HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IWSSVNWPAVVLTAASLLAIFLFRAPLAAVLFSAALAGLAWRMLLF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SESLSKAVGPVPAREHGIPFLEGVKVWLRVAALSFGGPAGQIAVMHRIIVEEKRWIGES
CCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHH
RFLHALNYCMLLPGPEAQQLAVYIGWLMHRTAGGLVAGTLFVLPGFLSILGLSYIYAAFG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVDLVEGLFFGLKAAVLAVVLHAVVRIGKRALKNRAMLAIAAAAFIAIFFFDVPFPVIIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SAALIGYLGGRAGSSLFRIGGGHGKTSAVVTADQDSVLGEEVPAHARPNVAWSLKISIIL
HHHHHHHHCCCCCCCCEEECCCCCCCCEEEECCCHHHHHCCCCCCCCCCCEEHHHHHHHH
LVLWLAPVAIIVGTLGLNNVFSQIALFFSQMAVLTFGGAYAVLAYVAQLAVEHYGWLRPG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCH
EMLDGLGMAETTPGPLIMVLQFVGFMGAFRDPGPLDPMSAATLGAILTTWVTFVPCFLWI
HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FLGAPFVETLRENRAVTGAMSAITAAVVGVILNLAIWFSLHVLFGTLTLVRGYGMSVEVP
HHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IWSSVNWPAVVLTAASLLAIFLFRAPLAAVLFSAALAGLAWRMLLF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]