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The map label for this gene is omp18 fragment 3

Identifier: 109947680

GI number: 109947680

Start: 998137

End: 998343

Strand: Reverse

Name: omp18 fragment 3

Synonym: Hac_1149

Alternate gene names: NA

Gene position: 998343-998137 (Counterclockwise)

Preceding gene: 109947681

Following gene: 109947679

Centisome position: 64.25

GC content: 38.16

Gene sequence:

>207_bases
GTGAATCAAAACATTCAAAATGCTGTCTCTCAAGTCAAAGCGACCCACAAACCCACTGTGACTAACACAAATAATTATGG
GCAAATGTATGGCATGGATGCCATGGCATGGTATAAGTGGTTCTTTGGTAAAAAGAAAAATTTTGGCTTTAGGTCTTATG
GATACTATAGCTATAACCACGCTAATTTGAGTTTTGTGGGGATCTAG

Upstream 100 bases:

>100_bases
GCTAGTAGCGATTACCACCACAAATACTATTGCAAGACGCTAAAGCTCTTTTAAATGCACTAGTGGCTAATTTGACAGAT
CAAAAACGGCGTTTTTAAAT

Downstream 100 bases:

>100_bases
CTTGGCATTATGAGTGGTGCTTCTCAAGTGAATAACTTCACTTATGGCGTGGGCTTTGATGCACTCTATAACTTCTATGA
AAGCAAAAAAGGCTATAACA

Product: outer membrane protein 18 fragment 3

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MNQNIQNAVSQVKATHKPTVTNTNNYGQMYGMDAMAWYKWFFGKKKNFGFRSYGYYSYNHANLSFVGI

Sequences:

>Translated_68_residues
MNQNIQNAVSQVKATHKPTVTNTNNYGQMYGMDAMAWYKWFFGKKKNFGFRSYGYYSYNHANLSFVGI
>Mature_68_residues
MNQNIQNAVSQVKATHKPTVTNTNNYGQMYGMDAMAWYKWFFGKKKNFGFRSYGYYSYNHANLSFVGI

Specific function: Unknown

COG id: COG5651

COG function: function code N; PPE-repeat proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7931; Mature: 7931

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQNIQNAVSQVKATHKPTVTNTNNYGQMYGMDAMAWYKWFFGKKKNFGFRSYGYYSYNH
CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECC
ANLSFVGI
CCEEEEEC
>Mature Secondary Structure
MNQNIQNAVSQVKATHKPTVTNTNNYGQMYGMDAMAWYKWFFGKKKNFGFRSYGYYSYNH
CCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECC
ANLSFVGI
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA