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The map label for this gene is homA

Identifier: 109947615

GI number: 109947615

Start: 936825

End: 937289

Strand: Reverse

Name: homA

Synonym: Hac_1080

Alternate gene names: NA

Gene position: 937289-936825 (Counterclockwise)

Preceding gene: 109947616

Following gene: 109947613

Centisome position: 60.32

GC content: 37.2

Gene sequence:

>465_bases
ATGCTCTTCATTTTTATATTCAGCGCCTTAGAGGCCCACCAAAAAGACGGATTTTTTATAGAAGCGGAGTTTGAAACCGG
ATTATTAGAAGGCGTGCAAACACAAGAAAAGATCGCCACTGTGCTTGAAAACGGCACTAGAAACACAACCAAGTATACAG
CAAAAAATACGACTAAAACCTACAGCTATCTGCCTAAAGACACCATTTTAAAAGGAGCGGCTAACTTATTCACTACCGCT
GAAGCGATTTCAAAATTAAAATTTTCCACTAAAAACCCTATTAGCGCGTTTGTATCTAATGGGAATTTGAATACAGAAAA
CTTTCTGCCTTATAATTTAAACACTGTTGAGATTAGTTTTTATTATGTGTTGAAAAAATACAAAGGGGTGGGTAATTTGG
ATGCAGCGAGCGGATTTAATTACCGCTATAAGTACTCTCAATTTTCTGTGGGCGTATCCCTTTGA

Upstream 100 bases:

>100_bases
AAGCCCTTTTAAAACTTTAAATTTCAAAAAAAAACAGCATCCCCCTTAAATGGTATAATTAAGAATAGTATAAGTTAAAA
AAGGATAGGCATGAAAAAAT

Downstream 100 bases:

>100_bases
TCCAAAATAAGACTAAATTTGCCGCTACCAATGGCGATCGCACCAACTCTTTTGTTTTTAAGGAAGGGAGCAGCCGCTTT
AAGGTATTCTTTAACTATGG

Product: hom family outer membrane protein

Products: NA

Alternate protein names: Hom Family Outer Membrane Protein; Outer Membrane Protein HomD; Outer Membrane Protein HomB

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLFIFIFSALEAHQKDGFFIEAEFETGLLEGVQTQEKIATVLENGTRNTTKYTAKNTTKTYSYLPKDTILKGAANLFTTA
EAISKLKFSTKNPISAFVSNGNLNTENFLPYNLNTVEISFYYVLKKYKGVGNLDAASGFNYRYKYSQFSVGVSL

Sequences:

>Translated_154_residues
MLFIFIFSALEAHQKDGFFIEAEFETGLLEGVQTQEKIATVLENGTRNTTKYTAKNTTKTYSYLPKDTILKGAANLFTTA
EAISKLKFSTKNPISAFVSNGNLNTENFLPYNLNTVEISFYYVLKKYKGVGNLDAASGFNYRYKYSQFSVGVSL
>Mature_154_residues
MLFIFIFSALEAHQKDGFFIEAEFETGLLEGVQTQEKIATVLENGTRNTTKYTAKNTTKTYSYLPKDTILKGAANLFTTA
EAISKLKFSTKNPISAFVSNGNLNTENFLPYNLNTVEISFYYVLKKYKGVGNLDAASGFNYRYKYSQFSVGVSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17257; Mature: 17257

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFIFIFSALEAHQKDGFFIEAEFETGLLEGVQTQEKIATVLENGTRNTTKYTAKNTTKT
CEEEEEEHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCE
YSYLPKDTILKGAANLFTTAEAISKLKFSTKNPISAFVSNGNLNTENFLPYNLNTVEISF
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE
YYVLKKYKGVGNLDAASGFNYRYKYSQFSVGVSL
EEEEHHHCCCCCCCCCCCCCEEEEECEEEEEECC
>Mature Secondary Structure
MLFIFIFSALEAHQKDGFFIEAEFETGLLEGVQTQEKIATVLENGTRNTTKYTAKNTTKT
CEEEEEEHHHHHHCCCCEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCE
YSYLPKDTILKGAANLFTTAEAISKLKFSTKNPISAFVSNGNLNTENFLPYNLNTVEISF
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE
YYVLKKYKGVGNLDAASGFNYRYKYSQFSVGVSL
EEEEHHHCCCCCCCCCCCCCEEEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA