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The map label for this gene is 109947570

Identifier: 109947570

GI number: 109947570

Start: 898193

End: 898924

Strand: Reverse

Name: 109947570

Synonym: Hac_1035

Alternate gene names: NA

Gene position: 898924-898193 (Counterclockwise)

Preceding gene: 109947571

Following gene: 109947569

Centisome position: 57.85

GC content: 36.07

Gene sequence:

>732_bases
ATGGCGTTAGTCAAAGAAGTGTTGGAAGTTTTAGGGTGTGTTTCGCCTTTTGAACTTCAGGAATCATGGGATAATAGCGG
GCTGAATTTAGGGAGTGAAAATAATGAATTTAGCCGCATTATCGCATGTTTAGAAATCACGCTTAACATCGCTCTAAACG
CCCAAGAAAACGCTTTAATCATCACGCACCACCCCTTAATTTTCAAGCCCTTAAAAATGCTAGATTATGAGACTTATCCG
AGTAACATTTTAAAAATCTTGATCCAAAAAAATATTTCAGTCATTAGCATGCACACCAATTTTGACAAAACGCATTTAAA
CAAGTATTTTGCCCACACGCTTTTAGGGTTTGATGATTTGATAGAAAAAGGTCTTATGTTAATGAAAGAAGATGTTAATA
TAGAATTTGATGCGTTGGTAGAAAAAATTAAATCTTCTTTGGGGGTGGAAAAATTAGCGTGCACTAAAGGCTCTGAAATC
ATTAAAAATTTAGCGTTTGTGTGTGGGGCGGGAGCGTCCATGTTTTATTCTTTAAAGGTGCAAACTTGTTTAATTACAGG
CGATGTGAAATACCATGAAGCTATGATCGCTCAATCTTTAGGCATAAGCTTGATTGACGCCACGCATTATTATAGCGAGA
GAGGGTTTGCACTCATTGTGGCTGAAATTTTGCATTCTTTTGATTATTTGGTTACAATAGAAAGCTTTAAAAACCCCTTG
CAAATCATTTAA

Upstream 100 bases:

>100_bases
TTACAAATTAGGGATTTGGCTAAAGGGTGTGCAATTCTTTATAAAGGGCAAGAAGAAGAAAGAGAAGAGCGCTTGAAAAA
CGCTCTCTCAAAGGCTTAAA

Downstream 100 bases:

>100_bases
AGGAAAGCTATGAACACCCATCTCAAACAATTGATTGAAATTTCGCATTTGGATAAAGAAATTGACTCTTTAGAGCCATT
GATTAGAGAAAAACGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MALVKEVLEVLGCVSPFELQESWDNSGLNLGSENNEFSRIIACLEITLNIALNAQENALIITHHPLIFKPLKMLDYETYP
SNILKILIQKNISVISMHTNFDKTHLNKYFAHTLLGFDDLIEKGLMLMKEDVNIEFDALVEKIKSSLGVEKLACTKGSEI
IKNLAFVCGAGASMFYSLKVQTCLITGDVKYHEAMIAQSLGISLIDATHYYSERGFALIVAEILHSFDYLVTIESFKNPL
QII

Sequences:

>Translated_243_residues
MALVKEVLEVLGCVSPFELQESWDNSGLNLGSENNEFSRIIACLEITLNIALNAQENALIITHHPLIFKPLKMLDYETYP
SNILKILIQKNISVISMHTNFDKTHLNKYFAHTLLGFDDLIEKGLMLMKEDVNIEFDALVEKIKSSLGVEKLACTKGSEI
IKNLAFVCGAGASMFYSLKVQTCLITGDVKYHEAMIAQSLGISLIDATHYYSERGFALIVAEILHSFDYLVTIESFKNPL
QII
>Mature_242_residues
ALVKEVLEVLGCVSPFELQESWDNSGLNLGSENNEFSRIIACLEITLNIALNAQENALIITHHPLIFKPLKMLDYETYPS
NILKILIQKNISVISMHTNFDKTHLNKYFAHTLLGFDDLIEKGLMLMKEDVNIEFDALVEKIKSSLGVEKLACTKGSEII
KNLAFVCGAGASMFYSLKVQTCLITGDVKYHEAMIAQSLGISLIDATHYYSERGFALIVAEILHSFDYLVTIESFKNPLQ
II

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Drosophila melanogaster, GI19921430, Length=243, Percent_Identity=24.6913580246914, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27221; Mature: 27090

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVKEVLEVLGCVSPFELQESWDNSGLNLGSENNEFSRIIACLEITLNIALNAQENALI
CHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEE
ITHHPLIFKPLKMLDYETYPSNILKILIQKNISVISMHTNFDKTHLNKYFAHTLLGFDDL
EEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCHHHH
IEKGLMLMKEDVNIEFDALVEKIKSSLGVEKLACTKGSEIIKNLAFVCGAGASMFYSLKV
HHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCHHEEEEEE
QTCLITGDVKYHEAMIAQSLGISLIDATHYYSERGFALIVAEILHSFDYLVTIESFKNPL
EEEEEECCCHHHHHHHHHHHCCEEEHHHHHHCCCCHHHHHHHHHHHHHHEEEHHHCCCCC
QII
CCC
>Mature Secondary Structure 
ALVKEVLEVLGCVSPFELQESWDNSGLNLGSENNEFSRIIACLEITLNIALNAQENALI
HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEE
ITHHPLIFKPLKMLDYETYPSNILKILIQKNISVISMHTNFDKTHLNKYFAHTLLGFDDL
EEECCHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCHHHH
IEKGLMLMKEDVNIEFDALVEKIKSSLGVEKLACTKGSEIIKNLAFVCGAGASMFYSLKV
HHHHHHHHHHCCCEEHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCCHHEEEEEE
QTCLITGDVKYHEAMIAQSLGISLIDATHYYSERGFALIVAEILHSFDYLVTIESFKNPL
EEEEEECCCHHHHHHHHHHHCCEEEHHHHHHCCCCHHHHHHHHHHHHHHEEEHHHCCCCC
QII
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]