| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947525
Identifier: 109947525
GI number: 109947525
Start: 862421
End: 862759
Strand: Reverse
Name: 109947525
Synonym: Hac_0983
Alternate gene names: NA
Gene position: 862759-862421 (Counterclockwise)
Preceding gene: 109947526
Following gene: 109947524
Centisome position: 55.52
GC content: 32.15
Gene sequence:
>339_bases ATGAAAATTATGCATCAAGTCAAGGATTTTTTAGATTTTTGCAAACAAACGATCCACAAAAATTCCAATGAAGCGTTTCA AAAAACGAAGCGGGCGTTTTTTAAAGAAAAATCTCAAAAAATCAGAGAGCAGGCGGTTAAAATCGTAGAAAAACGCTTGA CAAAAGAGAACATGCAATTGAGCGATTTTAGTGAAGAAGAATTAAAAATCATGTTTGAAGCTGAAGAAAAAAGGTTGTTA GAGCAAATCCACGCTAAAGAATTGAAAGAAAAACAAGAAAAAAACACCAAGCATTTTAAAGAAGTTTGGGAAAAGGGCGA AAATGAACAAGAAAAATAG
Upstream 100 bases:
>100_bases GACTTTCATGCTTTTGTAACCTTAACTAGAGAGTTTTAATCTTTTTTTGGTATTCTTTTAAGGGTCATTAGTCTTAAAAA CTCTTTAAAAACGGATAACC
Downstream 100 bases:
>100_bases CGTGTTTTCTAGCTTAATGAATTTTTTTAGTGAAAAGAATGAACGCTGGTTGTTAGCCCACAGGCACACGAGAGGGTTTG TGATAGTGGCATGGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKIMHQVKDFLDFCKQTIHKNSNEAFQKTKRAFFKEKSQKIREQAVKIVEKRLTKENMQLSDFSEEELKIMFEAEEKRLL EQIHAKELKEKQEKNTKHFKEVWEKGENEQEK
Sequences:
>Translated_112_residues MKIMHQVKDFLDFCKQTIHKNSNEAFQKTKRAFFKEKSQKIREQAVKIVEKRLTKENMQLSDFSEEELKIMFEAEEKRLL EQIHAKELKEKQEKNTKHFKEVWEKGENEQEK >Mature_112_residues MKIMHQVKDFLDFCKQTIHKNSNEAFQKTKRAFFKEKSQKIREQAVKIVEKRLTKENMQLSDFSEEELKIMFEAEEKRLL EQIHAKELKEKQEKNTKHFKEVWEKGENEQEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13687; Mature: 13687
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIMHQVKDFLDFCKQTIHKNSNEAFQKTKRAFFKEKSQKIREQAVKIVEKRLTKENMQL CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDFSEEELKIMFEAEEKRLLEQIHAKELKEKQEKNTKHFKEVWEKGENEQEK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKIMHQVKDFLDFCKQTIHKNSNEAFQKTKRAFFKEKSQKIREQAVKIVEKRLTKENMQL CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDFSEEELKIMFEAEEKRLLEQIHAKELKEKQEKNTKHFKEVWEKGENEQEK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA