| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947524
Identifier: 109947524
GI number: 109947524
Start: 861877
End: 862419
Strand: Reverse
Name: 109947524
Synonym: Hac_0982
Alternate gene names: NA
Gene position: 862419-861877 (Counterclockwise)
Preceding gene: 109947525
Following gene: 109947522
Centisome position: 55.5
GC content: 32.97
Gene sequence:
>543_bases GTGTTTTCTAGCTTAATGAATTTTTTTAGTGAAAAGAATGAACGCTGGTTGTTAGCCCACAGGCACACGAGAGGGTTTGT GATAGTGGCATGGCTTTTTAGGTTTAAAAGCATTGCGTTTTCTATTTTGATCACTTTGCTGATTATTTTGGTGGATATTT GGGTTTATAGCGATGTGCGCCAATTTTTATTGGACACTTCTAGCTCTTTTATTTTGCTTTTAATCGCTTTATTGATCAAG TGGGGCGTGATTATTTTTAGTGTACATAAATGCTACCAATTCAGCAAAAAAATGTTTGCACTCATTCAAAGAAAAAGGCA AATTAGAGAGAATTTAAGAAACCGCTTCAGTCAAAAAGACGCTAAAAATGTGGAAAAACTCTCTAATATCGCTGAAGAAA TCATTTCAAAAAAACAAGAAGAGTTCCACCACCAAGAAGATCTTAATAATAAATCTCATAAAGACAAGCTTTCTAACATT ACCGAAGAAATGATTCTTAAAAAACAAGAGGAATTGAAAGCTAAAAAGGATAAAGAGAATTAA
Upstream 100 bases:
>100_bases GAGCAAATCCACGCTAAAGAATTGAAAGAAAAACAAGAAAAAAACACCAAGCATTTTAAAGAAGTTTGGGAAAAGGGCGA AAATGAACAAGAAAAATAGC
Downstream 100 bases:
>100_bases AGAAGTGTTGAATGCTTTGTCTTAGTAGATATGCATGGTATAAAAATTTAGACGCCATGAGAAAAATGGTCATTTTAGAT TTGAGTTATAATGTAGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MFSSLMNFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLIILVDIWVYSDVRQFLLDTSSSFILLLIALLIK WGVIIFSVHKCYQFSKKMFALIQRKRQIRENLRNRFSQKDAKNVEKLSNIAEEIISKKQEEFHHQEDLNNKSHKDKLSNI TEEMILKKQEELKAKKDKEN
Sequences:
>Translated_180_residues MFSSLMNFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLIILVDIWVYSDVRQFLLDTSSSFILLLIALLIK WGVIIFSVHKCYQFSKKMFALIQRKRQIRENLRNRFSQKDAKNVEKLSNIAEEIISKKQEEFHHQEDLNNKSHKDKLSNI TEEMILKKQEELKAKKDKEN >Mature_180_residues MFSSLMNFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLIILVDIWVYSDVRQFLLDTSSSFILLLIALLIK WGVIIFSVHKCYQFSKKMFALIQRKRQIRENLRNRFSQKDAKNVEKLSNIAEEIISKKQEEFHHQEDLNNKSHKDKLSNI TEEMILKKQEELKAKKDKEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21547; Mature: 21547
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSLMNFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLIILVDIWVYSDVR CHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFLLDTSSSFILLLIALLIKWGVIIFSVHKCYQFSKKMFALIQRKRQIRENLRNRFSQKD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKNVEKLSNIAEEIISKKQEEFHHQEDLNNKSHKDKLSNITEEMILKKQEELKAKKDKEN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFSSLMNFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLIILVDIWVYSDVR CHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFLLDTSSSFILLLIALLIKWGVIIFSVHKCYQFSKKMFALIQRKRQIRENLRNRFSQKD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKNVEKLSNIAEEIISKKQEEFHHQEDLNNKSHKDKLSNITEEMILKKQEELKAKKDKEN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA