Click here to switch to the map view.

The map label for this gene is fliH

Identifier: 109947512

GI number: 109947512

Start: 850210

End: 850962

Strand: Reverse

Name: fliH

Synonym: Hac_0969

Alternate gene names: NA

Gene position: 850962-850210 (Counterclockwise)

Preceding gene: 109947513

Following gene: 109947511

Centisome position: 54.76

GC content: 35.99

Gene sequence:

>753_bases
TTGATCCAAAAAGACCATTTGAATAAACATGACATTCAAAAATACGAATTTAAGAGTATGGCGAATTTACCCCCTAAAAC
TAACCCCAATCACGCTTCTTTAGAAACGCCTATCTCACAAGAGCCTTTGGAAAAAAAAGTGATAGAAAATGATTTGATAG
ATTGTTTATTGAAAAAAACCGATGAGCTTTCAAGCCATTTGGTGAAATTGCAAATGCAATTTGAAAAAGCTCAAGAAGAG
AGCAAATCTTTGATTGAAAACGCTAAAAACGATGGCTATAAAATCGGCTTTAAAGAGGGCGAAGAAAAAATGCGTAACGA
GCTCACTCACGGCGTGAATGAAGAAAAAAACCAGCTTTTGCATGCGATCACCGCTTTAGATGAAAAAATGAAAAGTTCAG
AAAATCATTTAATGGCTTTAGAAAAAGAACTGAGCGCGATTGCGATAGATATGGCTAAAGAAGTGATCCTTAAAGAAGTG
GAAGACAACAGCCAAAAAGTGGCTCTCGCTTTGGCTGAAGAGCTATTAAAAAGTGTTTTAGACGCAACGGATATTCATTT
AAAAGTCAATCCTTTGGATTATCCTTATTTAAACGAGCATTTACAAAACGCTTCCAAAATCAAATTAGAGAGTAATGAGG
CTATTTCTAAAGGAGGCGTTATGATCACTAGTTCTAATGGGAGCCTTGATGGGAGTTTAATGGAGCGCTTTAGAACGCTT
AAAGAAAGCGTTTTGGATAATTTTAAGGTGTGA

Upstream 100 bases:

>100_bases
GTGGCTCAAAGAAAGATCATTGAAATCGTGCAAAGCTTGCAAGAAAAAGGCGTGATCCAAACGGACGAAGAGGAAGATAT
CGTTGAATAGCCGTAAAAAT

Downstream 100 bases:

>100_bases
TTTTGCAAAATAAAACTTTTGATTTAAACCCTAATGATATTGCAAGCTTGGAAGCAGTGTGCCAAACACTGCGGGAGCGT
ATTTTAGAAGTGGTGAGCAC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: Flagellar Assembly Protein; Flagellar Assembly Protein FliH; Flagellar Export Protein; Flagellar Biosynthesis Protein FliH

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MIQKDHLNKHDIQKYEFKSMANLPPKTNPNHASLETPISQEPLEKKVIENDLIDCLLKKTDELSSHLVKLQMQFEKAQEE
SKSLIENAKNDGYKIGFKEGEEKMRNELTHGVNEEKNQLLHAITALDEKMKSSENHLMALEKELSAIAIDMAKEVILKEV
EDNSQKVALALAEELLKSVLDATDIHLKVNPLDYPYLNEHLQNASKIKLESNEAISKGGVMITSSNGSLDGSLMERFRTL
KESVLDNFKV

Sequences:

>Translated_250_residues
MIQKDHLNKHDIQKYEFKSMANLPPKTNPNHASLETPISQEPLEKKVIENDLIDCLLKKTDELSSHLVKLQMQFEKAQEE
SKSLIENAKNDGYKIGFKEGEEKMRNELTHGVNEEKNQLLHAITALDEKMKSSENHLMALEKELSAIAIDMAKEVILKEV
EDNSQKVALALAEELLKSVLDATDIHLKVNPLDYPYLNEHLQNASKIKLESNEAISKGGVMITSSNGSLDGSLMERFRTL
KESVLDNFKV
>Mature_250_residues
MIQKDHLNKHDIQKYEFKSMANLPPKTNPNHASLETPISQEPLEKKVIENDLIDCLLKKTDELSSHLVKLQMQFEKAQEE
SKSLIENAKNDGYKIGFKEGEEKMRNELTHGVNEEKNQLLHAITALDEKMKSSENHLMALEKELSAIAIDMAKEVILKEV
EDNSQKVALALAEELLKSVLDATDIHLKVNPLDYPYLNEHLQNASKIKLESNEAISKGGVMITSSNGSLDGSLMERFRTL
KESVLDNFKV

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28277; Mature: 28277

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKDHLNKHDIQKYEFKSMANLPPKTNPNHASLETPISQEPLEKKVIENDLIDCLLKKT
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DELSSHLVKLQMQFEKAQEESKSLIENAKNDGYKIGFKEGEEKMRNELTHGVNEEKNQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHH
HAITALDEKMKSSENHLMALEKELSAIAIDMAKEVILKEVEDNSQKVALALAEELLKSVL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DATDIHLKVNPLDYPYLNEHLQNASKIKLESNEAISKGGVMITSSNGSLDGSLMERFRTL
CHHCEEEEECCCCCHHHHHHHCCHHHEEECCCCHHHHCCEEEECCCCCCCHHHHHHHHHH
KESVLDNFKV
HHHHHHHCCC
>Mature Secondary Structure
MIQKDHLNKHDIQKYEFKSMANLPPKTNPNHASLETPISQEPLEKKVIENDLIDCLLKKT
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DELSSHLVKLQMQFEKAQEESKSLIENAKNDGYKIGFKEGEEKMRNELTHGVNEEKNQLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHH
HAITALDEKMKSSENHLMALEKELSAIAIDMAKEVILKEVEDNSQKVALALAEELLKSVL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
DATDIHLKVNPLDYPYLNEHLQNASKIKLESNEAISKGGVMITSSNGSLDGSLMERFRTL
CHHCEEEEECCCCCHHHHHHHCCHHHEEECCCCHHHHCCEEEECCCCCCCHHHHHHHHHH
KESVLDNFKV
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA