| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fragment 2
Identifier: 109947266
GI number: 109947266
Start: 603685
End: 604335
Strand: Direct
Name: fragment 2
Synonym: Hac_0691
Alternate gene names: NA
Gene position: 603685-604335 (Clockwise)
Preceding gene: 109947265
Following gene: 109947267
Centisome position: 38.85
GC content: 35.64
Gene sequence:
>651_bases ATGAAGATAGGTCATCAAGAATCCAGCGATGGAGTTAAAATCTACAACATAGATGGTGAAATTGAGCTAGTTGACACTCC AGGATTATTCGGGTTTAAAGTAAAAGAACACGATAGTGGGAAGATAGAACGCTATAAAGATATTACAAAAAAATATGTCA GCGAAGCCCATCTCATTTTATACGCGCTCAACCCGTCAAATCCCATCAAAGAAAGTCATAAGGACGATTTGAACTGGTTG TTTAGAACGCTCAATCTTTTATCTAGGACCATATTTGTCATCAGCCGTTTTGATGAAGAAGCGGATATTGAAAATGAAGA AGATTACAACAAAAGATTTAAGATCAAAAAAGAAAATATTCAAAGCAGACTTGATGAACTGATTTCTTTAAACGAAGAAG AAAAAGAGAGTTTGGTGATTGTCGCTGTTGTTGCAAATCCTTTTGACTTGGGGTTTGAACATTGGCAAAAGCATAAAGAA GAATTTCAAAAACTTTCACATATCAAAGCCTTGCAAGATGCGACACAACAAAAGATTAAAGAAAATGGTGGGGAATTAAC CATCATAGAAGAAGCCAAAAAAGCATCATTCAAGATATTATCCATAGGCAAGCACCGCTTGCAAAACAAGTGTTGCAAGG CATTAGTATAG
Upstream 100 bases:
>100_bases ATGTCGCCGATCAAAAACTTAAAGTGGCTTTAGTGGGAGGTTTTTCTGAGGGAAAACATCCATAGCAGCAGCTTGGATCG AGCGATTAGACAAAACGAGC
Downstream 100 bases:
>100_bases AAATGGGATACTTGAATAAAATGCTTAAAAAAGGCGACAAGATATTCAAGATTTAAATGGAGAAATTTCTCAATCTCGCA TTCATTTAAGAGAATTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: LeoA Protein
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKIGHQESSDGVKIYNIDGEIELVDTPGLFGFKVKEHDSGKIERYKDITKKYVSEAHLILYALNPSNPIKESHKDDLNWL FRTLNLLSRTIFVISRFDEEADIENEEDYNKRFKIKKENIQSRLDELISLNEEEKESLVIVAVVANPFDLGFEHWQKHKE EFQKLSHIKALQDATQQKIKENGGELTIIEEAKKASFKILSIGKHRLQNKCCKALV
Sequences:
>Translated_216_residues MKIGHQESSDGVKIYNIDGEIELVDTPGLFGFKVKEHDSGKIERYKDITKKYVSEAHLILYALNPSNPIKESHKDDLNWL FRTLNLLSRTIFVISRFDEEADIENEEDYNKRFKIKKENIQSRLDELISLNEEEKESLVIVAVVANPFDLGFEHWQKHKE EFQKLSHIKALQDATQQKIKENGGELTIIEEAKKASFKILSIGKHRLQNKCCKALV >Mature_216_residues MKIGHQESSDGVKIYNIDGEIELVDTPGLFGFKVKEHDSGKIERYKDITKKYVSEAHLILYALNPSNPIKESHKDDLNWL FRTLNLLSRTIFVISRFDEEADIENEEDYNKRFKIKKENIQSRLDELISLNEEEKESLVIVAVVANPFDLGFEHWQKHKE EFQKLSHIKALQDATQQKIKENGGELTIIEEAKKASFKILSIGKHRLQNKCCKALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25025; Mature: 25025
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGHQESSDGVKIYNIDGEIELVDTPGLFGFKVKEHDSGKIERYKDITKKYVSEAHLIL CCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE YALNPSNPIKESHKDDLNWLFRTLNLLSRTIFVISRFDEEADIENEEDYNKRFKIKKENI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEHHHH QSRLDELISLNEEEKESLVIVAVVANPFDLGFEHWQKHKEEFQKLSHIKALQDATQQKIK HHHHHHHHCCCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENGGELTIIEEAKKASFKILSIGKHRLQNKCCKALV HCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIGHQESSDGVKIYNIDGEIELVDTPGLFGFKVKEHDSGKIERYKDITKKYVSEAHLIL CCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE YALNPSNPIKESHKDDLNWLFRTLNLLSRTIFVISRFDEEADIENEEDYNKRFKIKKENI EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEHHHH QSRLDELISLNEEEKESLVIVAVVANPFDLGFEHWQKHKEEFQKLSHIKALQDATQQKIK HHHHHHHHCCCCCCCCCEEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENGGELTIIEEAKKASFKILSIGKHRLQNKCCKALV HCCCCEEEEECCCCCCEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA