Click here to switch to the map view.

The map label for this gene is fragment

Identifier: 109947226

GI number: 109947226

Start: 572195

End: 572311

Strand: Direct

Name: fragment

Synonym: Hac_0649

Alternate gene names: NA

Gene position: 572195-572311 (Clockwise)

Preceding gene: 109947225

Following gene: 109947227

Centisome position: 36.82

GC content: 37.61

Gene sequence:

>117_bases
GTGGCAACAGGATATGGAATTAAAAAAGGGATTGATGCGATCGATGATAACATGAATGCCGATGATATTATCAAAAAAGC
AGAGGATTTACAAGAAGCGACAAAGAAAAGGGCTTGA

Upstream 100 bases:

>100_bases
TAATTCCAAAGGGGTTGGGATTTCATAACTAGTCGTGGAAGAACAGAAATTTAAAGGAGAAAACATGCTATGACCATTTA
TTGTAGCTAGAGTAACCCTA

Downstream 100 bases:

>100_bases
GCCTGTGGAGTCTGATTGCAAGCATGCTTTTCTCAAGTTGAAGAAGCCGTCAAAAAAGCGGATGTGATAATTTCTCAACT
TCAAGCCGTTGAGAAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 37

Protein sequence:

>38_residues
MATGYGIKKGIDAIDDNMNADDIIKKAEDLQEATKKRA

Sequences:

>Translated_38_residues
MATGYGIKKGIDAIDDNMNADDIIKKAEDLQEATKKRA
>Mature_37_residues
ATGYGIKKGIDAIDDNMNADDIIKKAEDLQEATKKRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4153; Mature: 4022

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGYGIKKGIDAIDDNMNADDIIKKAEDLQEATKKRA
CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATGYGIKKGIDAIDDNMNADDIIKKAEDLQEATKKRA
CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA