| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fragment 2
Identifier: 109947225
GI number: 109947225
Start: 571734
End: 572075
Strand: Direct
Name: fragment 2
Synonym: Hac_0648
Alternate gene names: NA
Gene position: 571734-572075 (Clockwise)
Preceding gene: 109947224
Following gene: 109947226
Centisome position: 36.79
GC content: 39.47
Gene sequence:
>342_bases ATGGCAGGCATTGGTCAATTAGCTATCCCTATTCCTAGGGTTGGGGCGATGATCGGAGCTTTTATGGGTGTGGCGTTGAG CCAAACTTTTTATGGCATCTCGTTAAAGGCTTTCAAAGAGGCTAAGCTAGTGCACCAAAGGTGCATTGAAATTGAAGAGG CATGCCGTGCAAACATTCTATTAGAGATCTATCAAAATCAATTTAAGGAGGTGTTTGAGCAATATTTTCATGGGAATGTA AAATTCTTTAATGAGAGTTTTGATGAACTTAAAAATGCACTTTATACAGGGGATGCAGATCTAACCATAAGTAGCCAATT AATAAGAGCCAAGAATGGCTAG
Upstream 100 bases:
>100_bases ATGTCACGGTTTTAATTCGCTATTTTTCTGGAAAGATTGATAAGATGGAGCTTTGCGAACGGCTTGGGAAAACCAACACC ACTCTTTAAGCGGTGGAGTT
Downstream 100 bases:
>100_bases GTCAAAAGCCGTTATTTGATAATTCCAAAGGGGTTGGGATTTCATAACTAGTCGTGGAAGAACAGAAATTTAAAGGAGAA AACATGCTATGACCATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAGIGQLAIPIPRVGAMIGAFMGVALSQTFYGISLKAFKEAKLVHQRCIEIEEACRANILLEIYQNQFKEVFEQYFHGNV KFFNESFDELKNALYTGDADLTISSQLIRAKNG
Sequences:
>Translated_113_residues MAGIGQLAIPIPRVGAMIGAFMGVALSQTFYGISLKAFKEAKLVHQRCIEIEEACRANILLEIYQNQFKEVFEQYFHGNV KFFNESFDELKNALYTGDADLTISSQLIRAKNG >Mature_112_residues AGIGQLAIPIPRVGAMIGAFMGVALSQTFYGISLKAFKEAKLVHQRCIEIEEACRANILLEIYQNQFKEVFEQYFHGNVK FFNESFDELKNALYTGDADLTISSQLIRAKNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12652; Mature: 12521
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIGQLAIPIPRVGAMIGAFMGVALSQTFYGISLKAFKEAKLVHQRCIEIEEACRANIL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEIYQNQFKEVFEQYFHGNVKFFNESFDELKNALYTGDADLTISSQLIRAKNG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure AGIGQLAIPIPRVGAMIGAFMGVALSQTFYGISLKAFKEAKLVHQRCIEIEEACRANIL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEIYQNQFKEVFEQYFHGNVKFFNESFDELKNALYTGDADLTISSQLIRAKNG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA