Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is birA [C]
Identifier: 109947161
GI number: 109947161
Start: 507709
End: 508347
Strand: Direct
Name: birA [C]
Synonym: Hac_0574
Alternate gene names: 109947161
Gene position: 507709-508347 (Clockwise)
Preceding gene: 109947160
Following gene: 109947162
Centisome position: 32.67
GC content: 37.4
Gene sequence:
>639_bases ATGAGAAAATGCGAAAAAAGGGTTTTTGAGAGCTTGCCTTCCACGCAAACCTATCTTTTAGAAAAACTTAAAAACGATGC ATTCAAAGCCCCTATTTTAGTTGTGGCTAAAAACCAAAGCGCTGGGATAGGCAGTAGAGGGAATATTTGGGAGAGTGCAA AAAGCGCTTTGACTTTTTCGCTCGCTTTAAATGCAAGCGATTTGCCTAAAGATTTACCCATGCAAGCGAACGCTTTGTAT TTGGGATTTTTATTCAAAGAAGTTTTAAAAGAGTTAGGTTCTCAAACCTGGCTTAAATGGCCTAATGACTTGTATTTAGG GGGTCAAAAAATAGGGGGCGTGCTGGTTAATGTTTATAAAAACATGCGGGTGTGCGGCATTGGAGTGAATAGGGTTTCAA AGAAATGGGCATGTTTAGATATTGGCGCGAGCGATGATTTGATTATAGAGGGCTTTTTAAAAAAAATCAAAGAAAATCTT TTTTGGGGGGAAGTTTTAAGTAAGTATGCGTTAGAATTCCATAGAAACGACTCTTTTAGTTTCCATAATGATTGGGGCGA ATTGGTGAGTTTAAAAGATGCGCAATTGTTAGAAGACGGTCGCATTTTGATTGAAGATAAGATATATAATAGGATATAA
Upstream 100 bases:
>100_bases GCAGTGTGCGTATAGCGCGATTGCAAGCGGTGGGTAAAAAGCCCTTGAAAGCGAAAGATTATTTGAATGGCAGGCGTTTG AAAGCAGGCGATATTTTGGC
Downstream 100 bases:
>100_bases ATATGGTGAATGAAATCATTGCAGTGGCTAATCAAAAAGGAGGCGTGGGCAAAACAACAACAGCGGTTAATTTAGCGGCT TCTTTAGCGGTGTTTGAGAA
Product: biotin--protein ligase
Products: AMP; diphosphate; [acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
Alternate protein names: Biotin/Acetyl-CoA-Carboxylase Ligase; Biotin-[Acetyl-CoA-Carboxylase] Ligase; Biotin-[Acetyl-CoA-Carboxylase] Synthetase; Biotin-(Acetyl-CoA-Carboxylase) Ligase; Biotin-Acetyl-CoA-Carboxylase Ligase
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRKCEKRVFESLPSTQTYLLEKLKNDAFKAPILVVAKNQSAGIGSRGNIWESAKSALTFSLALNASDLPKDLPMQANALY LGFLFKEVLKELGSQTWLKWPNDLYLGGQKIGGVLVNVYKNMRVCGIGVNRVSKKWACLDIGASDDLIIEGFLKKIKENL FWGEVLSKYALEFHRNDSFSFHNDWGELVSLKDAQLLEDGRILIEDKIYNRI
Sequences:
>Translated_212_residues MRKCEKRVFESLPSTQTYLLEKLKNDAFKAPILVVAKNQSAGIGSRGNIWESAKSALTFSLALNASDLPKDLPMQANALY LGFLFKEVLKELGSQTWLKWPNDLYLGGQKIGGVLVNVYKNMRVCGIGVNRVSKKWACLDIGASDDLIIEGFLKKIKENL FWGEVLSKYALEFHRNDSFSFHNDWGELVSLKDAQLLEDGRILIEDKIYNRI >Mature_212_residues MRKCEKRVFESLPSTQTYLLEKLKNDAFKAPILVVAKNQSAGIGSRGNIWESAKSALTFSLALNASDLPKDLPMQANALY LGFLFKEVLKELGSQTWLKWPNDLYLGGQKIGGVLVNVYKNMRVCGIGVNRVSKKWACLDIGASDDLIIEGFLKKIKENL FWGEVLSKYALEFHRNDSFSFHNDWGELVSLKDAQLLEDGRILIEDKIYNRI
Specific function: Bira Acts Both As A Biotin-Operon Repressor And As The Enzyme That Synthesizes The Corepressor, Acetyl-CoA:Carbon- Dioxide Ligase. This Protein Also Activates Biotin To Form Biotinyl-5'-Adenylate And Transfers The Biotin Moiety To Biotin-Accepting Protei
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.4.15
Molecular weight: Translated: 23976; Mature: 23976
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKCEKRVFESLPSTQTYLLEKLKNDAFKAPILVVAKNQSAGIGSRGNIWESAKSALTFS CCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHEEEE LALNASDLPKDLPMQANALYLGFLFKEVLKELGSQTWLKWPNDLYLGGQKIGGVLVNVYK EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHH NMRVCGIGVNRVSKKWACLDIGASDDLIIEGFLKKIKENLFWGEVLSKYALEFHRNDSFS CCEEEEECHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FHNDWGELVSLKDAQLLEDGRILIEDKIYNRI EECCHHHHHCCCHHHHHHCCCEEEECCHHCCC >Mature Secondary Structure MRKCEKRVFESLPSTQTYLLEKLKNDAFKAPILVVAKNQSAGIGSRGNIWESAKSALTFS CCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHEEEE LALNASDLPKDLPMQANALYLGFLFKEVLKELGSQTWLKWPNDLYLGGQKIGGVLVNVYK EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHH NMRVCGIGVNRVSKKWACLDIGASDDLIIEGFLKKIKENLFWGEVLSKYALEFHRNDSFS CCEEEEECHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC FHNDWGELVSLKDAQLLEDGRILIEDKIYNRI EECCHHHHHCCCHHHHHHCCCEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; biotin; apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
Specific reaction: ATP + biotin + apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)] = AMP + diphosphate + [acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
General reaction: Amination; Carboxylic acid formation (carboxamide formation [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA