Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947088
Identifier: 109947088
GI number: 109947088
Start: 433155
End: 433574
Strand: Direct
Name: 109947088
Synonym: Hac_0491
Alternate gene names: NA
Gene position: 433155-433574 (Clockwise)
Preceding gene: 109947074
Following gene: 109947089
Centisome position: 27.87
GC content: 37.14
Gene sequence:
>420_bases ATGAGTTTGCAAGCGCTAAACACACAAGATTCTGTAATGGCTCAACCCTTACTTATCCATGCCTTTTTTGCCGCCTTGCT CGCCCTAGCTTTTATCATCAATCTTTACACCCTTTTTAGAGAGAAGAATTTGATCCAATTAAACCGAAAAATCTATCTTG TCATGCCTGCGATTTATATCCTTTTAAGCATCGCTTTTTTGAGCGGGATTTTTGTTTGGGCGATGCAACAATTCGCTTTT TCTTTTAAGGTGATTGTCATGCTTTTGGGGTCATTGTCGGTGCTTATAGCAGAAATCAAACGCCATAAAAGCGCGAAATT CGCCATCACTAAAAAAGAACGGATGGAAGCTTATATTAAAAAAGCTAAAATCCTGTATTTTTTAGAAACGATTCTTATCA TTGTGTTAATGGTAGTTTGA
Upstream 100 bases:
>100_bases TTTGGGCTGTTAAGGTTTTCTTGGGCTAAATTCATTGTTGCATGATAGAATAAAAGGCTTAATCAAACATAAATCACTAA AAGGAAATTTATACTTAAAG
Downstream 100 bases:
>100_bases ATGCGTTTTGTCTATCACCCTTTAGCCAAAGAGCCTACTTTAAAAATAGAGGGCGAAAGTTATACGCATTTATACCGTTC AAGGCGCATAAAAAGTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSLQALNTQDSVMAQPLLIHAFFAALLALAFIINLYTLFREKNLIQLNRKIYLVMPAIYILLSIAFLSGIFVWAMQQFAF SFKVIVMLLGSLSVLIAEIKRHKSAKFAITKKERMEAYIKKAKILYFLETILIIVLMVV
Sequences:
>Translated_139_residues MSLQALNTQDSVMAQPLLIHAFFAALLALAFIINLYTLFREKNLIQLNRKIYLVMPAIYILLSIAFLSGIFVWAMQQFAF SFKVIVMLLGSLSVLIAEIKRHKSAKFAITKKERMEAYIKKAKILYFLETILIIVLMVV >Mature_138_residues SLQALNTQDSVMAQPLLIHAFFAALLALAFIINLYTLFREKNLIQLNRKIYLVMPAIYILLSIAFLSGIFVWAMQQFAFS FKVIVMLLGSLSVLIAEIKRHKSAKFAITKKERMEAYIKKAKILYFLETILIIVLMVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15931; Mature: 15800
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQALNTQDSVMAQPLLIHAFFAALLALAFIINLYTLFREKNLIQLNRKIYLVMPAIYI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLSIAFLSGIFVWAMQQFAFSFKVIVMLLGSLSVLIAEIKRHKSAKFAITKKERMEAYIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KAKILYFLETILIIVLMVV HHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SLQALNTQDSVMAQPLLIHAFFAALLALAFIINLYTLFREKNLIQLNRKIYLVMPAIYI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LLSIAFLSGIFVWAMQQFAFSFKVIVMLLGSLSVLIAEIKRHKSAKFAITKKERMEAYIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KAKILYFLETILIIVLMVV HHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA