Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
---|---|
Accession | NC_008228 |
Length | 5,187,005 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 109897766
GI number:
Start: 1735724
End: 1736914
Strand: Direct
Name: Not Available
Synonym: Patl_1444
Alternate gene names: NA
Gene position: NA
Preceding gene: 109897765
Following gene: 109897768
Centisome position: NA
GC content: NA
Gene sequence:
>1191_bases ATGGCAAAAAAACAACATAGTCTAAAAAAACTTTATAACTTGCATGCTTGGTTAGGATTTCAGTTGGCACTGTTAATGTT TGTTGTATTAGCCACTGGCACTATAGCGACTTTTTCTAACGAAATTGATTGGCTCATTTTCCCTGAATTAAGATCAACTG AAAAACCTGCCGATGCACCTGATTCAATGCAAATAGATGACTGGGTTAAGATTTATCAATCAGTTACCCAGGCCTATCCT AATAGTCCAATCACCTCAATGACTAAGCTCGATTCAGACTATTTAACTTTTAGAGTAGTGTTAGATAACGACTCGCTGCA CAATAGATTTGTGCAAGTTGACCCGTGGACCCACGAGGTCACAGGCGATATTCCACGTTTAACGGTACAGCGTTTTTTTC GCGATTTTCATCGATATTTATTTATGCCTGCGTTCCCTGGCTTGCTTATAGTTGGTCCATTATCTATCGTACTTTTACTC TCTTTGTACACTGGAATTAAAACCACAAGAAACTGGCGTAAAGCCCTTTGGCGTATGCGTATTACACAGGGTAAACGTAT ATTTTTAAGTGATTTACATAAAGTGTTAGGTTTGTGGGGCTTGTGGTTTACATTGCTAATGGCTATCACAGGTGCTTGGT ATTTCTATGAATTTGGTAACGCCGTGGCGGGTTCAAACATTGAGCCATCAGGCCCGATAGTCGAGAACAGCACCACTATT GAAAGAAAAGTGTTAAGTGTGGATGAGTTTCAAACTATTGTACAAAAAGCGCAAAATGCCCATGATAATTGGGAAATTAC TGCGTTTTACATGCCAATTGCGAGTGACAGAAGCTTTCAACTACGAGGAGTGAGTAACAGTAACCCCATTATACGCAACA GAGCCCTTAGGGTATTCATTGATCCTCAATCGCACGTTATTATTGATACATGGTCACCTGATTCAATTTCGATTCAAGCC TATATCAACGAATATGCTGATCCGCTACATTTTGGTAATTTCGGAGGTTTTTGGTTAAAAATGGTTTGGTTTGTTTTTGG GATAGCATTGACTGCTATGTCTTATACTGGTGTTTTGATGACTTGGAAACGGACTAAGTCCTCAGCTTTAACTCGTGCGC AAAAGATGACTTTACCTGTTTTTATTTTATCCCTAACCGCTTTTATTTTTTGGTTTTCAAGGTTTATCTAG
Upstream 100 bases:
>100_bases GTAACTGGTAATTTAAAGATGTAGCTCGCATCCACTAGTTAGATATACCCTCAAACCTAATATCGATTTTCGTATTCAAC ACCTTAGTAAGAAAGAAGTC
Downstream 100 bases:
>100_bases AGTAGCAAAGCACTCAGACGTTACATTAACATTACTCGAGCTCAGTATATCTTATCAGCACGCTGTGAGAGTTAATAACC TGCAAATTTAAGGAGGGCTT
Product: PepSY-associated TM helix-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>396_residues MAKKQHSLKKLYNLHAWLGFQLALLMFVVLATGTIATFSNEIDWLIFPELRSTEKPADAPDSMQIDDWVKIYQSVTQAYP NSPITSMTKLDSDYLTFRVVLDNDSLHNRFVQVDPWTHEVTGDIPRLTVQRFFRDFHRYLFMPAFPGLLIVGPLSIVLLL SLYTGIKTTRNWRKALWRMRITQGKRIFLSDLHKVLGLWGLWFTLLMAITGAWYFYEFGNAVAGSNIEPSGPIVENSTTI ERKVLSVDEFQTIVQKAQNAHDNWEITAFYMPIASDRSFQLRGVSNSNPIIRNRALRVFIDPQSHVIIDTWSPDSISIQA YINEYADPLHFGNFGGFWLKMVWFVFGIALTAMSYTGVLMTWKRTKSSALTRAQKMTLPVFILSLTAFIFWFSRFI
Sequences:
NA
Specific function: NA
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA