| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812541
Identifier: 108812541
GI number: 108812541
Start: 2664228
End: 2664539
Strand: Reverse
Name: 108812541
Synonym: YPN_2380
Alternate gene names: NA
Gene position: 2664539-2664228 (Counterclockwise)
Preceding gene: 108812542
Following gene: 108812540
Centisome position: 58.76
GC content: 43.59
Gene sequence:
>312_bases TTGTATCGTACTGACAGGAAGTCGCTATCAGTAAGCGTTCTTCTTACTGTTTTCGTGGAGTTGATGATGAAGCGTATTAT TAAAGGCGACTTAAATTTATCTCATCTGGTTATTGCCCATGCGGCAATTGATCGCCATCAAAAGTCATACGGAGAACGGC GTCAGGGCTGGCCATCCACTTATCTTGTTCGCTACAAAAATAACCGTGTTGCCGTTGAAGTTGTCACCCGACGTCAGTCG TATGTGGCGACATTGATGATTGGCGCGCGTAATTTGAGTAAATTATGTGGAGTATCAGCATTATTACCCTAA
Upstream 100 bases:
>100_bases TAGCCAAAGCCCGCTACGCGCGGCGATGATCTGTTATCTACTCAGCCAGGAAGTGTAGTCTGTCATGGCCGGGAATTCTC AGTAAGTGTGAATTTCTCGC
Downstream 100 bases:
>100_bases TTATGATTTATCTATTGGGTAGACAATATGATATTTCATCAAGTAGTGGTGCGCGTTAAAGCATATCGTTGTGTGCGTTA AATCACGGAAGTGTATGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MYRTDRKSLSVSVLLTVFVELMMKRIIKGDLNLSHLVIAHAAIDRHQKSYGERRQGWPSTYLVRYKNNRVAVEVVTRRQS YVATLMIGARNLSKLCGVSALLP
Sequences:
>Translated_103_residues MYRTDRKSLSVSVLLTVFVELMMKRIIKGDLNLSHLVIAHAAIDRHQKSYGERRQGWPSTYLVRYKNNRVAVEVVTRRQS YVATLMIGARNLSKLCGVSALLP >Mature_103_residues MYRTDRKSLSVSVLLTVFVELMMKRIIKGDLNLSHLVIAHAAIDRHQKSYGERRQGWPSTYLVRYKNNRVAVEVVTRRQS YVATLMIGARNLSKLCGVSALLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11760; Mature: 11760
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRTDRKSLSVSVLLTVFVELMMKRIIKGDLNLSHLVIAHAAIDRHQKSYGERRQGWPST CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE YLVRYKNNRVAVEVVTRRQSYVATLMIGARNLSKLCGVSALLP EEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure MYRTDRKSLSVSVLLTVFVELMMKRIIKGDLNLSHLVIAHAAIDRHQKSYGERRQGWPST CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE YLVRYKNNRVAVEVVTRRQSYVATLMIGARNLSKLCGVSALLP EEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA