| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is eaeH [C]
Identifier: 108812492
GI number: 108812492
Start: 2612246
End: 2613250
Strand: Reverse
Name: eaeH [C]
Synonym: YPN_2331
Alternate gene names: 108812492
Gene position: 2613250-2612246 (Counterclockwise)
Preceding gene: 108812493
Following gene: 108812491
Centisome position: 57.63
GC content: 43.98
Gene sequence:
>1005_bases ATGTATTTTAATAAAATAATTTCATTTAATATTATTTCACGAATAGTTATTTGTATCTTTTTGATATGTGGAATGTTCAT GGCTGGGGCTTCAGAAAAATATGATGCTAACGCACCGCAACAGGTCCAGCCTTATTCTGTCTCTTCATCTGCATTTGAAA ATCTCCATCCTAATAATGAAATGGAGAGTTCAATCAATCCCTTTTCCGCATCGGATACAGAAAGAAATGCTGCAATAATA GATCGCGCCAATAAGGAGCAGGAGACTGAAGCGGTGAATAAGATGATAAGCACCGGGGCCAGGTTAGCTGCATCAGGCAG GGCATCTGATGTTGCTCACTCAATGGTGGGCGATGCGGTTAATCAAGAAATCAAACAGTGGTTAAATCGATTCGGTACGG CTCAAGTTAATCTGAATTTTGACAAAAATTTTTCGCTAAAAGAAAGCTCTCTTGATTGGCTGGCTCCTTGGTATGACTCT GCTTCATTCCTCTTTTTTAGTCAGTTAGGTATTCGCAATAAAGACAGCCGCAACACACTTAACCTTGGCGTCGGGATACG TACATTGGAGAACGGTTGGCTGTACGGACTTAATACTTTTTATGATAATGATTTGACCGGCCACAACCACCGTATCGGTC TTGGTGCCGAGGCCTGGACCGATTATTTACAGTTGGCTGCCAATGGGTATTTTCGCCTCAATGGATGGCACTCGTCGCGT GATTTCTCCGACTATAAAGAGCGCCCAGCCACTGGGGGGGATTTGCGCGCGAATGCTTATTTACCTGCACTCCCACAACT GGGGGGGAAGTTGATGTATGAGCAATACACCGGTGAGCGTGTTGCTTTATTGTGCCCAGAAAACCCCCAGCTAGGCTGGG GGTTCAGTAAAGCTTTCAGCTTTGGGTCAGTTATAAAAACCCCTTTTGATTTGTTAAAACAGTTTGCGGTCTGGCAACTG CAAATGTTCAACAAGAAATCAAAAGGGGGTCCCAATGAGGGATGA
Upstream 100 bases:
>100_bases TGCAGTTTGACGTATGACAGGTATGCTTTATTTCATTTAAATTATGATGGTTTTCCAGCCAATCAGTGAGTTTCTCTTGA TAAGGAATGCGGGAATGTCT
Downstream 100 bases:
>100_bases AAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCATATAGTTTTTGCGCCGAAGTACCGAAGGCAGGTGTTCTACA GGGAAAAACGCAGAGCGATT
Product: invasin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MYFNKIISFNIISRIVICIFLICGMFMAGASEKYDANAPQQVQPYSVSSSAFENLHPNNEMESSINPFSASDTERNAAII DRANKEQETEAVNKMISTGARLAASGRASDVAHSMVGDAVNQEIKQWLNRFGTAQVNLNFDKNFSLKESSLDWLAPWYDS ASFLFFSQLGIRNKDSRNTLNLGVGIRTLENGWLYGLNTFYDNDLTGHNHRIGLGAEAWTDYLQLAANGYFRLNGWHSSR DFSDYKERPATGGDLRANAYLPALPQLGGKLMYEQYTGERVALLCPENPQLGWGFSKAFSFGSVIKTPFDLLKQFAVWQL QMFNKKSKGGPNEG
Sequences:
>Translated_334_residues MYFNKIISFNIISRIVICIFLICGMFMAGASEKYDANAPQQVQPYSVSSSAFENLHPNNEMESSINPFSASDTERNAAII DRANKEQETEAVNKMISTGARLAASGRASDVAHSMVGDAVNQEIKQWLNRFGTAQVNLNFDKNFSLKESSLDWLAPWYDS ASFLFFSQLGIRNKDSRNTLNLGVGIRTLENGWLYGLNTFYDNDLTGHNHRIGLGAEAWTDYLQLAANGYFRLNGWHSSR DFSDYKERPATGGDLRANAYLPALPQLGGKLMYEQYTGERVALLCPENPQLGWGFSKAFSFGSVIKTPFDLLKQFAVWQL QMFNKKSKGGPNEG >Mature_334_residues MYFNKIISFNIISRIVICIFLICGMFMAGASEKYDANAPQQVQPYSVSSSAFENLHPNNEMESSINPFSASDTERNAAII DRANKEQETEAVNKMISTGARLAASGRASDVAHSMVGDAVNQEIKQWLNRFGTAQVNLNFDKNFSLKESSLDWLAPWYDS ASFLFFSQLGIRNKDSRNTLNLGVGIRTLENGWLYGLNTFYDNDLTGHNHRIGLGAEAWTDYLQLAANGYFRLNGWHSSR DFSDYKERPATGGDLRANAYLPALPQLGGKLMYEQYTGERVALLCPENPQLGWGFSKAFSFGSVIKTPFDLLKQFAVWQL QMFNKKSKGGPNEG
Specific function: Invasin is a protein that allows enteric bacteria to penetrate cultured mammalian cells. The entry of invasin in the cell is mediated by binding several beta-1 chain integrins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell surface [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 Big-1 (bacterial Ig-like domain 1) domains [H]
Homologues:
Organism=Escherichia coli, GI145693153, Length=211, Percent_Identity=43.1279620853081, Blast_Score=177, Evalue=6e-46, Organism=Escherichia coli, GI145693120, Length=227, Percent_Identity=35.2422907488987, Blast_Score=113, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003344 - InterPro: IPR016186 - InterPro: IPR016187 - InterPro: IPR003535 - InterPro: IPR013117 - InterPro: IPR008964 - InterPro: IPR015217 [H]
Pfam domain/function: PF02369 Big_1; PF07979 Intimin_C; PF09134 Invasin_D3 [H]
EC number: NA
Molecular weight: Translated: 37346; Mature: 37346
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFNKIISFNIISRIVICIFLICGMFMAGASEKYDANAPQQVQPYSVSSSAFENLHPNNE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCH MESSINPFSASDTERNAAIIDRANKEQETEAVNKMISTGARLAASGRASDVAHSMVGDAV HHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHH NQEIKQWLNRFGTAQVNLNFDKNFSLKESSLDWLAPWYDSASFLFFSQLGIRNKDSRNTL HHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCEE NLGVGIRTLENGWLYGLNTFYDNDLTGHNHRIGLGAEAWTDYLQLAANGYFRLNGWHSSR EECCEEEEECCCEEEEEHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCCEEEEECCCCCC DFSDYKERPATGGDLRANAYLPALPQLGGKLMYEQYTGERVALLCPENPQLGWGFSKAFS CCHHHHHCCCCCCCCCCCCCCCCCHHHCCEEEHHHCCCCEEEEECCCCCCCCCCHHHHHH FGSVIKTPFDLLKQFAVWQLQMFNKKSKGGPNEG HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MYFNKIISFNIISRIVICIFLICGMFMAGASEKYDANAPQQVQPYSVSSSAFENLHPNNE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCH MESSINPFSASDTERNAAIIDRANKEQETEAVNKMISTGARLAASGRASDVAHSMVGDAV HHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHH NQEIKQWLNRFGTAQVNLNFDKNFSLKESSLDWLAPWYDSASFLFFSQLGIRNKDSRNTL HHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCEE NLGVGIRTLENGWLYGLNTFYDNDLTGHNHRIGLGAEAWTDYLQLAANGYFRLNGWHSSR EECCEEEEECCCEEEEEHHHCCCCCCCCCCEECCCHHHHHHHHHHHCCCEEEEECCCCCC DFSDYKERPATGGDLRANAYLPALPQLGGKLMYEQYTGERVALLCPENPQLGWGFSKAFS CCHHHHHCCCCCCCCCCCCCCCCCHHHCCEEEHHHCCCCEEEEECCCCCCCCCCHHHHHH FGSVIKTPFDLLKQFAVWQLQMFNKKSKGGPNEG HHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3304658; 1693333; 10514372 [H]