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The map label for this gene is flgF [H]

Identifier: 108812482

GI number: 108812482

Start: 2603943

End: 2604572

Strand: Reverse

Name: flgF [H]

Synonym: YPN_2321

Alternate gene names: 108812482

Gene position: 2604572-2603943 (Counterclockwise)

Preceding gene: 108812483

Following gene: 108812481

Centisome position: 57.44

GC content: 57.94

Gene sequence:

>630_bases
ATGGATCACGCAATATATACCGCAATGGGGGCTGCCCGGCAGTCTCTGGAGTTGCAGGCCGTTACCGCCAACAATTTGGC
GAACGCCTCTACGCCAGGCTTTCGTGCGCAATTGGCTGCGATGCGCGCGGTACCCATTGATGGGCCAAGTCTGGCCACCC
GCACGATGGTCACCACATCAACTCCCGGTGTGGATATCAGCCAGGGGACGATGAATTTCAGTGGTCGCCCGCTGGATGTT
GCCTTGCAGCAGGACGGCTATCTGGCGGTACAACTGCCCGATGGCAGCGAAGCCTACACGCGCAACGGTAATATTCAGAT
TTCTGCTAACGGGCAGATGACGGTACAGGGCTACCCATTGATGGGGGATAACGGCCCGATTGACGTCCCGCCCCAAGCAG
CAGTCACTATTGCGGCGGATGGCACTATCTCGGCGCTGAATGCCGGTGATTCACCAAACACCATTGCGCAACTGGGTCAG
ATCAAACGGGTTCAGGCGACGGCGGGTGAAATGATGCACGGCGATGATGGTTTGTTCCATTTGACCCCGGAGACTCAGCA
GGCGCGGGGCGCGCAATTGCCCAATGATCCGCTCGTAAAACCTGGCGAACGTGAGCACCAATGGCTTTAA

Upstream 100 bases:

>100_bases
GCAACGTAACTATCAGTCCAACGCGCAGACCATCAAAACCCAAGATCAGATCTTACAAACTCTGGTTAGCCTGCGTTAAT
CGTACTGACGGGAAGAGCTC

Downstream 100 bases:

>100_bases
ACGTCAGCGGGCGGTCTTTGAAGATTTGCTGTACCAAACCCTGCGTCAACCGGGAGCACAATCCTCCGAACAGACCACCT
TACCGTCTGGTTTACAGATT

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTSTPGVDISQGTMNFSGRPLDV
ALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQ
IKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVKPGEREHQWL

Sequences:

>Translated_209_residues
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTSTPGVDISQGTMNFSGRPLDV
ALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQ
IKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVKPGEREHQWL
>Mature_209_residues
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTSTPGVDISQGTMNFSGRPLDV
ALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQ
IKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVKPGEREHQWL

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=200, Percent_Identity=64.5, Blast_Score=261, Evalue=2e-71,
Organism=Escherichia coli, GI1787318, Length=157, Percent_Identity=35.6687898089172, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 21903; Mature: 21903

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTS
CCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHEEEHHEECCCCCCCCCEEEEEEEC
TPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPL
CCCCEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCEEECCCEEEEECCEEEEEEEEE
MGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVQATAGEMMHGDDGLFH
ECCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHEEEHHHHCCEEECCCCEEE
LTPETQQARGAQLPNDPLVKPGEREHQWL
ECCCHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTS
CCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHEEEHHEECCCCCCCCCEEEEEEEC
TPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPL
CCCCEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCEEECCCEEEEECCEEEEEEEEE
MGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVQATAGEMMHGDDGLFH
ECCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHEEEHHHHCCEEECCCCEEE
LTPETQQARGAQLPNDPLVKPGEREHQWL
ECCCHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]