| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is flgL [H]
Identifier: 108812476
GI number: 108812476
Start: 2596709
End: 2597722
Strand: Reverse
Name: flgL [H]
Synonym: YPN_2315
Alternate gene names: 108812476
Gene position: 2597722-2596709 (Counterclockwise)
Preceding gene: 108812477
Following gene: 108812474
Centisome position: 57.29
GC content: 47.63
Gene sequence:
>1014_bases TTGCTGAACGTGTTACTAAAAGGAACTGACATCGTGCGTTTAAGTACCAGCATGTTGTACCAACAAAATATGCAGGGCAT CACCAATGCTCAATCACTGTGGATGCAGACCGGGCAGCAGCTCTCGACCGGTAAACGTGTGGTGAATCCATCCGATGACC CCATGGCTGCGTCGCAAGCGGTGATGGTGTCACAGGCTGAATCTGAAAATAGCCAATATACATTAGCGCGCAGTTTTGCT CGCCAAAGTTCATCATTGGAAACGACGGTCTTGGCACAAACAACCAGCACGATTCAGTCAATTCAAAGTTTAGTTATCAG CGCCAAAAACGATACCTTAAGTGATGATGACCGTGCCTCTTATGCAACGCAGTTACAGGGTTTGAAAGATCAGTTGCTGA ATCAGGCCAATACCACTGATGGCAACGGTCGCTACATCTTTGCTGGCTTCAAAAGTGACAAGCCTCCCTTTGCGGTGAGT GACACCGGTGAGGTGACCTACGTAGGCGGTGATGTCGCCATTGAGCAAAAAGTGGATACCAACCGTTCGATGACTGCCGG CCATACGGGTGCCAGTGTTTTCATGGCATTGACCGGCAATGCGAAACCGGAACCTGACGATGTGAATGGTGCGCCGGTTG CTGCGGAAAAAAATATCTTTGATACCATTGATACGGTACTGAATTCATTAAAAACCCCGCTGCAAGGAGCCTCTGACGAG GTGAAAGCGCAGGCGCAAGCCGATCTGGATAAAGGTCTTCGCGGGTTATCTAACTCATTGAATAATGTCTTATCGGTTCA AGCAGAAATTGGGGTTCAACTGCAAGAGTTGGATAATTTAGACAGCTTGGGCGGTGATCGCACCTTAATTAACAAACAGC AGTTAAGTGATTTACAAGATGTCGATTGGACCTCGGCTATCTCTTCTTATGTTATGCAACAAGCGGCGCTACAAGCCTCG TATACCACCTTCACCAATATGCAGGGTTTGTCTCTGTTCCAGTTGAATACGTAA
Upstream 100 bases:
>100_bases TGTTTATATTGGTTAAATTATTATTGGCGGTGACGATATTATTGCCTGCGAGGGCAATCATGCGCCGCGCTTAATTCATT CCAGGTTTAGCGGGTATGGC
Downstream 100 bases:
>100_bases TCGGCCTTAACCCCGTAGCACACACAGCCTACGGGGTCTTCGCACGGGTCATTAACGCACATGCCGTCACCTCATCAGTG ACTAACACGGTGGCGTGTTG
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MLNVLLKGTDIVRLSTSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQYTLARSFA RQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLLNQANTTDGNGRYIFAGFKSDKPPFAVS DTGEVTYVGGDVAIEQKVDTNRSMTAGHTGASVFMALTGNAKPEPDDVNGAPVAAEKNIFDTIDTVLNSLKTPLQGASDE VKAQAQADLDKGLRGLSNSLNNVLSVQAEIGVQLQELDNLDSLGGDRTLINKQQLSDLQDVDWTSAISSYVMQQAALQAS YTTFTNMQGLSLFQLNT
Sequences:
>Translated_337_residues MLNVLLKGTDIVRLSTSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQYTLARSFA RQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLLNQANTTDGNGRYIFAGFKSDKPPFAVS DTGEVTYVGGDVAIEQKVDTNRSMTAGHTGASVFMALTGNAKPEPDDVNGAPVAAEKNIFDTIDTVLNSLKTPLQGASDE VKAQAQADLDKGLRGLSNSLNNVLSVQAEIGVQLQELDNLDSLGGDRTLINKQQLSDLQDVDWTSAISSYVMQQAALQAS YTTFTNMQGLSLFQLNT >Mature_337_residues MLNVLLKGTDIVRLSTSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQAVMVSQAESENSQYTLARSFA RQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRASYATQLQGLKDQLLNQANTTDGNGRYIFAGFKSDKPPFAVS DTGEVTYVGGDVAIEQKVDTNRSMTAGHTGASVFMALTGNAKPEPDDVNGAPVAAEKNIFDTIDTVLNSLKTPLQGASDE VKAQAQADLDKGLRGLSNSLNNVLSVQAEIGVQLQELDNLDSLGGDRTLINKQQLSDLQDVDWTSAISSYVMQQAALQAS YTTFTNMQGLSLFQLNT
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=325, Percent_Identity=60.6153846153846, Blast_Score=387, Evalue=1e-109,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 36168; Mature: 36168
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNVLLKGTDIVRLSTSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQA CCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCHHHHHH VMVSQAESENSQYTLARSFARQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRAS HHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHH YATQLQGLKDQLLNQANTTDGNGRYIFAGFKSDKPPFAVSDTGEVTYVGGDVAIEQKVDT HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEECCCEEEEECCCC NRSMTAGHTGASVFMALTGNAKPEPDDVNGAPVAAEKNIFDTIDTVLNSLKTPLQGASDE CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH VKAQAQADLDKGLRGLSNSLNNVLSVQAEIGVQLQELDNLDSLGGDRTLINKQQLSDLQD HHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCEEHHHHCCHHHCCCCCEECCHHHHHHHHC VDWTSAISSYVMQQAALQASYTTFTNMQGLSLFQLNT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MLNVLLKGTDIVRLSTSMLYQQNMQGITNAQSLWMQTGQQLSTGKRVVNPSDDPMAASQA CCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCHHHHHH VMVSQAESENSQYTLARSFARQSSSLETTVLAQTTSTIQSIQSLVISAKNDTLSDDDRAS HHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHH YATQLQGLKDQLLNQANTTDGNGRYIFAGFKSDKPPFAVSDTGEVTYVGGDVAIEQKVDT HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCCEEEECCCEEEEECCCC NRSMTAGHTGASVFMALTGNAKPEPDDVNGAPVAAEKNIFDTIDTVLNSLKTPLQGASDE CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH VKAQAQADLDKGLRGLSNSLNNVLSVQAEIGVQLQELDNLDSLGGDRTLINKQQLSDLQD HHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCEEHHHHCCHHHCCCCCEECCHHHHHHHHC VDWTSAISSYVMQQAALQASYTTFTNMQGLSLFQLNT CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2193164; 11677609 [H]